Mutagenetix > Incidental Mutation

Incidental Mutation 'R0556:Or8b53'

45569

Institutional Source

Beutler Lab

Gene Symbol

Or8b53

Ensembl Gene

ENSMUSG00000061039

Gene Name

olfactory receptor family 8 subfamily B member 53

Synonyms

MOR165-6, GA_x6K02T2PVTD-32458442-32459374, Olfr920

MMRRC Submission

038748-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.054) question?

Stock #

R0556 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

38664092-38668159 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to T at 38667041 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Aspartic acid to Valine at position 19 (D19V)

Ref Sequence

ENSEMBL: ENSMUSP00000074300 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000074740]

AlphaFold

E9Q413

Predicted Effect

possibly damaging
Transcript: ENSMUST00000074740
AA Change: D19V

PolyPhen 2 Score 0.879 (Sensitivity: 0.82; Specificity: 0.94)

SMART Domains

Protein: ENSMUSP00000074300
Gene: ENSMUSG00000061039
AA Change: D19V

Domain	Start	End	E-Value	Type
Pfam:7tm_4	31	308	3.2e-47	PFAM
Pfam:7tm_1	41	290	3.6e-22	PFAM

Meta Mutation Damage Score

0.1795

Coding Region Coverage

1x: 99.2%
3x: 98.6%
10x: 96.9%
20x: 94.7%

Validation Efficiency

98% (64/65)

MGI Phenotype

FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

Allele List at MGI

Other mutations in this stock

Total: 63 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
1600012H06Rik	T	A	17: 15,164,213 (GRCm39)	Y113*	probably null	Het
4930402F06Rik	T	C	2: 35,280,482 (GRCm39)		probably benign	Het
Acad11	A	G	9: 103,992,501 (GRCm39)	E481G	probably damaging	Het
Aldh1a1	A	T	19: 20,611,842 (GRCm39)	N389Y	probably damaging	Het
Bmpr2	C	T	1: 59,854,487 (GRCm39)	T112M	probably damaging	Het
Bms1	A	G	6: 118,390,140 (GRCm39)	Y227H	probably damaging	Het
Cab39	A	G	1: 85,763,212 (GRCm39)		probably benign	Het
Ccn3	A	T	15: 54,612,563 (GRCm39)	T191S	probably damaging	Het
Ccno	T	C	13: 113,124,820 (GRCm39)		probably null	Het
Cct6b	A	G	11: 82,610,270 (GRCm39)		probably benign	Het
Cd101	A	C	3: 100,927,970 (GRCm39)	I37S	probably damaging	Het
Ces1a	T	C	8: 93,771,740 (GRCm39)	H19R	probably benign	Het
Clec16a	A	G	16: 10,456,649 (GRCm39)		probably null	Het
Cntnap1	T	C	11: 101,074,822 (GRCm39)	F831S	probably benign	Het
Col24a1	A	G	3: 145,020,489 (GRCm39)	T287A	possibly damaging	Het
Colgalt2	C	T	1: 152,347,564 (GRCm39)		probably benign	Het
Cpd	A	G	11: 76,693,171 (GRCm39)		probably benign	Het
Cyp3a16	C	A	5: 145,392,790 (GRCm39)	M145I	probably benign	Het
Ddx54	T	A	5: 120,757,719 (GRCm39)		probably benign	Het
Dock7	A	T	4: 98,833,426 (GRCm39)	L1925Q	probably damaging	Het
Eif4g1	A	T	16: 20,494,544 (GRCm39)	Y127F	probably damaging	Het
Erap1	T	A	13: 74,808,444 (GRCm39)	V52E	probably damaging	Het
Fbxo6	G	T	4: 148,230,632 (GRCm39)	T210N	probably damaging	Het
Fcgbpl1	C	T	7: 27,858,803 (GRCm39)	H2308Y	probably benign	Het
Garre1	T	C	7: 33,939,222 (GRCm39)	T222A	probably damaging	Het
Gnat3	T	G	5: 18,224,596 (GRCm39)	V332G	probably damaging	Het
Ift22	T	A	5: 136,940,145 (GRCm39)		probably null	Het
Igkv4-71	A	G	6: 69,220,171 (GRCm39)	C109R	probably damaging	Het
Igsf10	A	G	3: 59,236,296 (GRCm39)	L1295P	probably benign	Het
Itga4	T	C	2: 79,155,983 (GRCm39)	I983T	probably benign	Het
Lhcgr	A	T	17: 89,079,491 (GRCm39)	V65D	probably damaging	Het
Mau2	G	C	8: 70,495,082 (GRCm39)	T85R	probably damaging	Het
Morc2a	T	C	11: 3,631,809 (GRCm39)		probably null	Het
Morc2b	A	T	17: 33,356,812 (GRCm39)	M320K	probably benign	Het
Ms4a18	C	A	19: 10,991,065 (GRCm39)	V10F	probably damaging	Het
Mstn	A	T	1: 53,103,284 (GRCm39)	I207F	probably benign	Het
Mtor	A	G	4: 148,553,837 (GRCm39)	E812G	possibly damaging	Het
Myo1h	A	G	5: 114,457,852 (GRCm39)	Y121C	probably damaging	Het
Or11g27	T	C	14: 50,771,381 (GRCm39)	S171P	probably benign	Het
Or4a66	A	C	2: 88,531,115 (GRCm39)	V186G	possibly damaging	Het
Plcd3	G	A	11: 102,968,632 (GRCm39)	T353M	probably damaging	Het
Pnpla7	T	A	2: 24,942,313 (GRCm39)		probably null	Het
Ppp1r12b	T	A	1: 134,705,060 (GRCm39)	Y876F	probably damaging	Het
Prelid2	T	A	18: 42,084,245 (GRCm39)		probably benign	Het
Prickle1	A	G	15: 93,398,662 (GRCm39)	L722P	probably benign	Het
Prr12	A	G	7: 44,680,093 (GRCm39)	L1887P	unknown	Het
Ptk2b	A	G	14: 66,409,593 (GRCm39)	L481P	probably damaging	Het
Rgl3	T	A	9: 21,887,140 (GRCm39)	K531*	probably null	Het
Sacs	A	G	14: 61,421,407 (GRCm39)	I115V	probably damaging	Het
Septin3	G	T	15: 82,167,966 (GRCm39)		probably benign	Het
Simc1	T	C	13: 54,673,160 (GRCm39)	S503P	probably benign	Het
Stard9	T	C	2: 120,529,404 (GRCm39)	V1887A	probably benign	Het
Synj2	T	A	17: 6,088,230 (GRCm39)	L1427*	probably null	Het
Taar2	A	G	10: 23,816,793 (GRCm39)	D111G	probably damaging	Het
Tlr5	A	G	1: 182,801,716 (GRCm39)	N340S	probably damaging	Het
Tmco2	A	G	4: 120,966,314 (GRCm39)	L14P	probably damaging	Het
Tnik	A	T	3: 28,679,367 (GRCm39)	D746V	possibly damaging	Het
Trip11	C	A	12: 101,850,777 (GRCm39)	E811*	probably null	Het
Ttll9	T	C	2: 152,815,526 (GRCm39)		probably null	Het
Uchl1	A	G	5: 66,839,824 (GRCm39)	E122G	probably benign	Het
Vwa3b	C	A	1: 37,203,566 (GRCm39)		probably benign	Het
Zan	T	C	5: 137,452,482 (GRCm39)	N1533S	unknown	Het
Zfp687	G	T	3: 94,917,719 (GRCm39)	D684E	probably damaging	Het

Other mutations in Or8b53

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01686:Or8b53	APN	9	38,667,550 (GRCm39)	missense	probably damaging	1.00
IGL01728:Or8b53	APN	9	38,667,391 (GRCm39)	missense	possibly damaging	0.63
IGL01867:Or8b53	APN	9	38,667,194 (GRCm39)	missense	probably damaging	1.00
IGL02271:Or8b53	APN	9	38,667,784 (GRCm39)	missense	probably benign
IGL03078:Or8b53	APN	9	38,667,541 (GRCm39)	nonsense	probably null
R0166:Or8b53	UTSW	9	38,667,484 (GRCm39)	missense	probably benign
R0446:Or8b53	UTSW	9	38,667,114 (GRCm39)	missense	probably damaging	1.00
R0453:Or8b53	UTSW	9	38,667,425 (GRCm39)	missense	probably damaging	0.99
R1585:Or8b53	UTSW	9	38,667,716 (GRCm39)	missense	probably damaging	1.00
R2847:Or8b53	UTSW	9	38,667,332 (GRCm39)	missense	possibly damaging	0.89
R4676:Or8b53	UTSW	9	38,666,955 (GRCm39)	start gained	probably benign
R4825:Or8b53	UTSW	9	38,667,703 (GRCm39)	missense	probably damaging	1.00
R5026:Or8b53	UTSW	9	38,667,041 (GRCm39)	missense	probably benign	0.01
R5144:Or8b53	UTSW	9	38,667,689 (GRCm39)	missense	possibly damaging	0.90
R5573:Or8b53	UTSW	9	38,667,000 (GRCm39)	missense	probably damaging	1.00
R5872:Or8b53	UTSW	9	38,667,412 (GRCm39)	missense	probably benign	0.06
R6131:Or8b53	UTSW	9	38,667,362 (GRCm39)	missense	probably damaging	1.00
R6729:Or8b53	UTSW	9	38,667,124 (GRCm39)	missense	probably benign	0.00
R7731:Or8b53	UTSW	9	38,667,542 (GRCm39)	missense	possibly damaging	0.90
R7800:Or8b53	UTSW	9	38,667,914 (GRCm39)	missense	probably damaging	0.97
R8960:Or8b53	UTSW	9	38,667,385 (GRCm39)	missense	possibly damaging	0.80

Predicted Primers

PCR Primer
(F):5'- TCTAGGATTTGACAGCCCCACTCTC -3'
(R):5'- CATCCAGTGTGGATCATAGCACCAG -3'

Sequencing Primer
(F):5'- AGCCCCACTCTCAGGATTAG -3'
(R):5'- TGGATTGCAGATAGCCACATAAC -3'

Posted On

2013-06-11