Incidental Mutation 'R5885:Vmn2r97'
ID 456063
Institutional Source Beutler Lab
Gene Symbol Vmn2r97
Ensembl Gene ENSMUSG00000091491
Gene Name vomeronasal 2, receptor 97
Synonyms EG627367
MMRRC Submission 043237-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.071) question?
Stock # R5885 (G1)
Quality Score 225
Status Not validated
Chromosome 17
Chromosomal Location 19134584-19168333 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to G at 19168035 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Tyrosine to Cysteine at position 763 (Y763C)
Ref Sequence ENSEMBL: ENSMUSP00000129313 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000168710] [ENSMUST00000232219]
AlphaFold K7N6Z2
Predicted Effect possibly damaging
Transcript: ENSMUST00000168710
AA Change: Y763C

PolyPhen 2 Score 0.501 (Sensitivity: 0.88; Specificity: 0.90)
SMART Domains Protein: ENSMUSP00000129313
Gene: ENSMUSG00000091491
AA Change: Y763C

DomainStartEndE-ValueType
signal peptide 1 21 N/A INTRINSIC
Pfam:ANF_receptor 82 442 2.9e-36 PFAM
Pfam:NCD3G 513 566 4.9e-21 PFAM
Pfam:7tm_3 599 834 1.7e-52 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000232219
Coding Region Coverage
  • 1x: 99.9%
  • 3x: 99.4%
  • 10x: 97.4%
  • 20x: 91.8%
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 43 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Acot10 T A 15: 20,666,190 (GRCm39) M184L probably benign Het
Adgrv1 A T 13: 81,572,390 (GRCm39) S4924T probably benign Het
Atp10a T A 7: 58,463,548 (GRCm39) M1027K possibly damaging Het
Axl T A 7: 25,466,277 (GRCm39) K510I probably damaging Het
Azi2 T A 9: 117,876,628 (GRCm39) I48N probably damaging Het
Cysltr2 T C 14: 73,266,931 (GRCm39) K260E probably benign Het
Dnah3 T C 7: 119,668,927 (GRCm39) I720V probably benign Het
Dnah8 C T 17: 31,013,691 (GRCm39) P3811S probably damaging Het
Epas1 A G 17: 87,134,972 (GRCm39) D535G probably damaging Het
Fam47e A G 5: 92,713,827 (GRCm39) K152R probably damaging Het
Fbxl3 A T 14: 103,320,667 (GRCm39) I260K probably benign Het
Fcgr3 A G 1: 170,885,280 (GRCm39) V115A probably damaging Het
Fgf12 G T 16: 28,217,046 (GRCm39) D98E possibly damaging Het
Flt3 T C 5: 147,286,439 (GRCm39) T716A probably damaging Het
Gad1-ps G A 10: 99,281,009 (GRCm39) noncoding transcript Het
Gpr141b A T 13: 19,913,519 (GRCm39) noncoding transcript Het
Grin2a A G 16: 9,579,769 (GRCm39) Y165H possibly damaging Het
Ifna4 T A 4: 88,760,599 (GRCm39) W168R probably damaging Het
Itga11 A G 9: 62,670,132 (GRCm39) Y752C probably damaging Het
Khdrbs3 A G 15: 68,896,547 (GRCm39) probably null Het
Kif24 A T 4: 41,423,463 (GRCm39) Y263N probably damaging Het
Lama5 G T 2: 179,843,624 (GRCm39) T441K probably damaging Het
Lrrc47 T A 4: 154,100,429 (GRCm39) V335D possibly damaging Het
Map1b A T 13: 99,566,589 (GRCm39) I2044N unknown Het
Mast2 C T 4: 116,172,035 (GRCm39) G638S probably damaging Het
Myo9a T C 9: 59,778,503 (GRCm39) S1420P probably benign Het
Neurl2 T C 2: 164,674,811 (GRCm39) T184A probably damaging Het
Nfatc3 A G 8: 106,822,944 (GRCm39) I577V probably benign Het
Nipal3 A T 4: 135,199,288 (GRCm39) V186E probably damaging Het
Pgbd5 G A 8: 125,111,205 (GRCm39) T162M probably damaging Het
Plod2 T A 9: 92,488,709 (GRCm39) probably null Het
Psg22 T A 7: 18,452,257 (GRCm39) L19Q probably damaging Het
Psg27 T A 7: 18,295,711 (GRCm39) N245Y probably damaging Het
Ptprc T A 1: 138,016,246 (GRCm39) I539F probably damaging Het
Rad1 T C 15: 10,488,143 (GRCm39) L59P probably damaging Het
Slc2a9 G A 5: 38,598,017 (GRCm39) R137W probably damaging Het
Spats2l C T 1: 57,985,321 (GRCm39) A458V probably damaging Het
Sptbn5 A G 2: 119,907,144 (GRCm39) probably benign Het
Stox1 C A 10: 62,500,627 (GRCm39) L644F probably damaging Het
Sv2b C T 7: 74,806,501 (GRCm39) G213E probably damaging Het
Tas2r121 T G 6: 132,677,254 (GRCm39) L239F probably damaging Het
Trrap T A 5: 144,731,603 (GRCm39) V854E probably damaging Het
Xkr6 T A 14: 63,844,360 (GRCm39) W128R probably damaging Het
Other mutations in Vmn2r97
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00897:Vmn2r97 APN 17 19,167,921 (GRCm39) missense probably benign 0.37
IGL00962:Vmn2r97 APN 17 19,149,490 (GRCm39) missense probably damaging 1.00
IGL01704:Vmn2r97 APN 17 19,168,073 (GRCm39) missense probably damaging 0.99
IGL01888:Vmn2r97 APN 17 19,149,286 (GRCm39) nonsense probably null
IGL02429:Vmn2r97 APN 17 19,150,596 (GRCm39) missense possibly damaging 0.94
IGL02742:Vmn2r97 APN 17 19,149,432 (GRCm39) missense probably damaging 0.97
IGL02934:Vmn2r97 APN 17 19,149,947 (GRCm39) missense probably benign 0.00
IGL02978:Vmn2r97 APN 17 19,168,298 (GRCm39) missense probably benign 0.01
IGL03230:Vmn2r97 APN 17 19,149,668 (GRCm39) missense probably benign 0.10
IGL03241:Vmn2r97 APN 17 19,148,438 (GRCm39) missense probably benign 0.11
IGL03050:Vmn2r97 UTSW 17 19,167,900 (GRCm39) missense possibly damaging 0.84
PIT4469001:Vmn2r97 UTSW 17 19,149,878 (GRCm39) missense probably benign 0.00
R0482:Vmn2r97 UTSW 17 19,167,930 (GRCm39) missense probably damaging 1.00
R0514:Vmn2r97 UTSW 17 19,134,734 (GRCm39) missense probably benign 0.25
R0944:Vmn2r97 UTSW 17 19,167,665 (GRCm39) missense probably benign 0.13
R1061:Vmn2r97 UTSW 17 19,148,440 (GRCm39) nonsense probably null
R1546:Vmn2r97 UTSW 17 19,168,110 (GRCm39) missense probably damaging 1.00
R1725:Vmn2r97 UTSW 17 19,149,397 (GRCm39) missense probably benign 0.43
R1860:Vmn2r97 UTSW 17 19,167,648 (GRCm39) missense probably benign 0.01
R1938:Vmn2r97 UTSW 17 19,149,593 (GRCm39) missense probably benign 0.01
R1944:Vmn2r97 UTSW 17 19,160,500 (GRCm39) missense probably benign 0.00
R2027:Vmn2r97 UTSW 17 19,149,944 (GRCm39) missense unknown
R2106:Vmn2r97 UTSW 17 19,168,100 (GRCm39) missense probably damaging 1.00
R2151:Vmn2r97 UTSW 17 19,167,584 (GRCm39) nonsense probably null
R2153:Vmn2r97 UTSW 17 19,167,584 (GRCm39) nonsense probably null
R2154:Vmn2r97 UTSW 17 19,167,584 (GRCm39) nonsense probably null
R2516:Vmn2r97 UTSW 17 19,167,814 (GRCm39) missense probably benign
R3739:Vmn2r97 UTSW 17 19,148,413 (GRCm39) missense probably damaging 1.00
R3744:Vmn2r97 UTSW 17 19,149,890 (GRCm39) missense probably benign
R3885:Vmn2r97 UTSW 17 19,148,596 (GRCm39) missense possibly damaging 0.90
R3899:Vmn2r97 UTSW 17 19,167,873 (GRCm39) missense probably damaging 0.96
R4115:Vmn2r97 UTSW 17 19,148,332 (GRCm39) missense probably benign 0.01
R4247:Vmn2r97 UTSW 17 19,167,542 (GRCm39) missense possibly damaging 0.83
R4287:Vmn2r97 UTSW 17 19,168,337 (GRCm39) intron probably benign
R4439:Vmn2r97 UTSW 17 19,150,616 (GRCm39) missense probably benign 0.00
R4523:Vmn2r97 UTSW 17 19,149,333 (GRCm39) missense probably benign 0.03
R4783:Vmn2r97 UTSW 17 19,149,550 (GRCm39) missense probably benign
R4948:Vmn2r97 UTSW 17 19,167,561 (GRCm39) missense possibly damaging 0.95
R4981:Vmn2r97 UTSW 17 19,160,436 (GRCm39) nonsense probably null
R5029:Vmn2r97 UTSW 17 19,168,173 (GRCm39) missense probably damaging 1.00
R5200:Vmn2r97 UTSW 17 19,148,615 (GRCm39) missense probably damaging 1.00
R5541:Vmn2r97 UTSW 17 19,148,617 (GRCm39) nonsense probably null
R5637:Vmn2r97 UTSW 17 19,167,628 (GRCm39) nonsense probably null
R5765:Vmn2r97 UTSW 17 19,167,442 (GRCm39) nonsense probably null
R6272:Vmn2r97 UTSW 17 19,167,861 (GRCm39) missense possibly damaging 0.70
R6553:Vmn2r97 UTSW 17 19,150,566 (GRCm39) nonsense probably null
R6818:Vmn2r97 UTSW 17 19,168,193 (GRCm39) missense possibly damaging 0.95
R6880:Vmn2r97 UTSW 17 19,134,770 (GRCm39) missense probably benign 0.00
R7012:Vmn2r97 UTSW 17 19,167,756 (GRCm39) missense probably damaging 0.99
R7023:Vmn2r97 UTSW 17 19,134,663 (GRCm39) missense probably damaging 1.00
R7044:Vmn2r97 UTSW 17 19,134,629 (GRCm39) missense probably benign 0.05
R7191:Vmn2r97 UTSW 17 19,150,548 (GRCm39) missense probably damaging 1.00
R7503:Vmn2r97 UTSW 17 19,148,470 (GRCm39) missense probably benign
R7862:Vmn2r97 UTSW 17 19,167,416 (GRCm39) missense probably damaging 1.00
R7876:Vmn2r97 UTSW 17 19,149,326 (GRCm39) missense probably damaging 0.97
R7890:Vmn2r97 UTSW 17 19,149,802 (GRCm39) missense probably benign 0.00
R7936:Vmn2r97 UTSW 17 19,150,662 (GRCm39) missense probably damaging 1.00
R7978:Vmn2r97 UTSW 17 19,167,854 (GRCm39) missense probably damaging 1.00
R8405:Vmn2r97 UTSW 17 19,134,802 (GRCm39) critical splice donor site probably null
R8755:Vmn2r97 UTSW 17 19,168,104 (GRCm39) missense probably damaging 1.00
R8790:Vmn2r97 UTSW 17 19,160,472 (GRCm39) missense probably damaging 1.00
R8850:Vmn2r97 UTSW 17 19,149,607 (GRCm39) missense probably benign 0.00
R9060:Vmn2r97 UTSW 17 19,134,585 (GRCm39) start codon destroyed probably null 0.94
R9079:Vmn2r97 UTSW 17 19,149,640 (GRCm39) missense probably benign
R9252:Vmn2r97 UTSW 17 19,167,849 (GRCm39) missense probably benign 0.00
R9278:Vmn2r97 UTSW 17 19,134,762 (GRCm39) missense probably benign 0.00
R9342:Vmn2r97 UTSW 17 19,149,368 (GRCm39) missense probably benign
R9422:Vmn2r97 UTSW 17 19,149,333 (GRCm39) missense probably benign 0.03
R9496:Vmn2r97 UTSW 17 19,149,227 (GRCm39) missense probably damaging 1.00
R9571:Vmn2r97 UTSW 17 19,149,919 (GRCm39) missense probably benign
R9601:Vmn2r97 UTSW 17 19,134,770 (GRCm39) missense probably benign
R9672:Vmn2r97 UTSW 17 19,149,442 (GRCm39) missense probably benign 0.00
R9773:Vmn2r97 UTSW 17 19,168,221 (GRCm39) missense probably benign 0.01
R9795:Vmn2r97 UTSW 17 19,167,561 (GRCm39) missense probably damaging 1.00
Predicted Primers PCR Primer
(F):5'- GGTCAGTTTTCCAGGGAGAATG -3'
(R):5'- CTGTGCTGGAAGCCAAGATAG -3'

Sequencing Primer
(F):5'- GGGCCAAACTACATCATTCCTATATG -3'
(R):5'- GATAGAGAATACTTCCATGGCTACC -3'
Posted On 2017-02-15