Mutagenetix > Incidental Mutation

Incidental Mutation 'R5902:Cebpz'

456418

Institutional Source

Beutler Lab

Gene Symbol

Cebpz

Ensembl Gene

ENSMUSG00000024081

Gene Name

CCAAT/enhancer binding protein zeta

Synonyms

Cebpa-rs1, CBF2, Cbf

MMRRC Submission

044100-MU

Accession Numbers

Essential gene?

Probably essential (E-score: 0.968) question?

Stock #

R5902 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

79226435-79244495 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to C at 79233366 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Methionine to Arginine at position 787 (M787R)

Ref Sequence

ENSEMBL: ENSMUSP00000024885 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000024885]

AlphaFold

no structure available at present

Predicted Effect

probably benign
Transcript: ENSMUST00000024885
AA Change: M787R

PolyPhen 2 Score 0.199 (Sensitivity: 0.92; Specificity: 0.88)

SMART Domains

Protein: ENSMUSP00000024885
Gene: ENSMUSG00000024081
AA Change: M787R

Domain	Start	End	E-Value	Type
low complexity region	23	36	N/A	INTRINSIC
coiled coil region	113	143	N/A	INTRINSIC
Pfam:CBF	523	732	5.7e-58	PFAM
low complexity region	834	851	N/A	INTRINSIC
low complexity region	881	904	N/A	INTRINSIC
low complexity region	957	969	N/A	INTRINSIC
low complexity region	1028	1042	N/A	INTRINSIC

Coding Region Coverage

1x: 99.9%
3x: 99.4%
10x: 97.4%
20x: 92.1%

Validation Efficiency

99% (81/82)

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene belongs to the CEBP family. The encoded protein plays a role in cellular response to environmental stimuli through a transcriptional process that involves heat shock factors, conserved DNA elements (heat shock elements or HSEs) and CCAAT boxes. The protein acts as a DNA-binding transcriptional activator and regulates the heat-shock protein 70 (HSP70) promoter in a CCAAT-dependent manner. The protein is also involved in cell growth and differentiation, particularly, hematopoietic differentiation. Methylation of the promoter of this gene or mutations within the gene may be correlated with occurance of acute myeloid leukemia (AML). [provided by RefSeq, Jun 2016]

Allele List at MGI

Other mutations in this stock

Total: 71 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
4932414N04Rik	A	G	2: 68,539,281 (GRCm39)	M1V	probably null	Het
Abca13	T	A	11: 9,247,177 (GRCm39)	L2308H	probably damaging	Het
Abcc8	T	C	7: 45,764,463 (GRCm39)	T1161A	probably benign	Het
Acin1	T	A	14: 54,901,130 (GRCm39)	T659S	probably benign	Het
Actl7a	G	T	4: 56,743,827 (GRCm39)	R118L	probably damaging	Het
Acyp2	C	T	11: 30,456,354 (GRCm39)	E98K	possibly damaging	Het
Alkbh8	A	G	9: 3,385,414 (GRCm39)	K569E	probably benign	Het
Anxa3	A	T	5: 96,960,712 (GRCm39)	K39*	probably null	Het
Aoc2	A	G	11: 101,220,072 (GRCm39)	E659G	probably damaging	Het
Atg7	C	T	6: 114,650,639 (GRCm39)	T83M	possibly damaging	Het
AU022252	T	C	4: 119,084,101 (GRCm39)	D104G	probably benign	Het
Car6	T	C	4: 150,271,956 (GRCm39)	Y231C	possibly damaging	Het
Cdh10	T	G	15: 18,985,341 (GRCm39)		probably null	Het
Chst2	A	G	9: 95,287,662 (GRCm39)	L228P	probably damaging	Het
Clic4	T	C	4: 134,999,869 (GRCm39)	K11R	probably benign	Het
Col6a3	C	T	1: 90,729,921 (GRCm39)		probably null	Het
Commd7	T	A	2: 153,463,737 (GRCm39)	T144S	probably damaging	Het
Ctla2a	T	A	13: 61,082,834 (GRCm39)	*138Y	probably null	Het
Dhx33	A	T	11: 70,879,957 (GRCm39)	V351D	probably damaging	Het
Dnah9	G	A	11: 65,916,013 (GRCm39)	T2313I	probably benign	Het
Dspp	A	T	5: 104,325,977 (GRCm39)	D780V	unknown	Het
Dync1li1	A	G	9: 114,546,929 (GRCm39)		probably null	Het
E2f3	C	T	13: 30,169,250 (GRCm39)		probably benign	Het
Fan1	T	C	7: 64,023,070 (GRCm39)		probably null	Het
Gart	A	G	16: 91,425,415 (GRCm39)	S617P	probably damaging	Het
Ggcx	A	G	6: 72,406,979 (GRCm39)	N705S	possibly damaging	Het
Gm4841	A	T	18: 60,403,868 (GRCm39)	V75E	probably damaging	Het
Greb1l	A	G	18: 10,538,302 (GRCm39)	E1105G	probably benign	Het
Hr	C	A	14: 70,795,231 (GRCm39)	Q288K	probably benign	Het
Hus1	T	C	11: 8,960,669 (GRCm39)		probably benign	Het
Ifi47	C	A	11: 48,986,213 (GRCm39)		probably null	Het
Irf2bp1	T	C	7: 18,738,372 (GRCm39)	V4A	probably benign	Het
Kprp	C	T	3: 92,731,835 (GRCm39)	C405Y	unknown	Het
Lacc1	T	C	14: 77,272,239 (GRCm39)	I186V	possibly damaging	Het
Lifr	A	G	15: 7,220,231 (GRCm39)	T954A	probably benign	Het
Lonrf2	T	C	1: 38,846,174 (GRCm39)	M333V	probably benign	Het
Mthfd1	A	T	12: 76,337,826 (GRCm39)	H400L	probably benign	Het
Myh4	A	G	11: 67,141,733 (GRCm39)	K864R	possibly damaging	Het
Nup50	C	T	15: 84,819,641 (GRCm39)	A305V	probably benign	Het
Or4a74	T	A	2: 89,439,595 (GRCm39)	I284L	probably damaging	Het
Or4k44	C	T	2: 111,367,739 (GRCm39)	M298I	probably benign	Het
Pax4	G	T	6: 28,447,126 (GRCm39)	Q3K	probably benign	Het
Pced1b	T	G	15: 97,282,970 (GRCm39)	Y336*	probably null	Het
Postn	C	A	3: 54,279,510 (GRCm39)	N329K	probably benign	Het
Prickle1	T	C	15: 93,408,553 (GRCm39)	E82G	probably null	Het
Prtn3	T	C	10: 79,718,766 (GRCm39)	Y241H	probably damaging	Het
Rasgrf2	A	T	13: 92,068,011 (GRCm39)	I260K	probably damaging	Het
Sh3glb1	T	C	3: 144,418,431 (GRCm39)	N44S	possibly damaging	Het
Sis	A	T	3: 72,867,589 (GRCm39)		probably null	Het
Slc4a9	A	G	18: 36,662,386 (GRCm39)		probably null	Het
Slc4a9	A	T	18: 36,664,560 (GRCm39)	D406V	probably damaging	Het
Slc8a1	C	T	17: 81,715,511 (GRCm39)	G841R	probably damaging	Het
Smn1	C	T	13: 100,263,412 (GRCm39)	P60L	probably benign	Het
Snai1	G	A	2: 167,383,930 (GRCm39)	C241Y	probably damaging	Het
Spock3	A	G	8: 63,808,336 (GRCm39)	D411G	unknown	Het
Szt2	T	A	4: 118,248,700 (GRCm39)	T607S	probably benign	Het
Tcap	A	T	11: 98,274,673 (GRCm39)	M1L	probably benign	Het
Tex29	A	T	8: 11,905,723 (GRCm39)		probably benign	Het
Tex29	C	A	8: 11,904,276 (GRCm39)		probably benign	Het
Tex29	C	T	8: 11,904,277 (GRCm39)		probably benign	Het
Tln2	T	C	9: 67,269,999 (GRCm39)	T467A	probably benign	Het
Trim34a	C	T	7: 103,910,328 (GRCm39)	Q377*	probably null	Het
Ube2q1	T	A	3: 89,683,487 (GRCm39)	L144*	probably null	Het
Vps13c	A	G	9: 67,841,729 (GRCm39)	E1917G	probably benign	Het
Wdr19	T	A	5: 65,384,482 (GRCm39)	N525K	probably benign	Het
Wdr3	A	T	3: 100,051,807 (GRCm39)		probably benign	Het
Wnt5b	T	A	6: 119,425,199 (GRCm39)	H6L	probably benign	Het
Yju2	A	G	17: 56,269,077 (GRCm39)	T62A	probably damaging	Het
Zdbf2	T	C	1: 63,345,685 (GRCm39)	S1355P	possibly damaging	Het
Zfp11	T	A	5: 129,734,976 (GRCm39)	I162F	probably damaging	Het
Zpbp	T	C	11: 11,365,332 (GRCm39)	T172A	probably benign	Het

Other mutations in Cebpz

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00817:Cebpz	APN	17	79,242,259 (GRCm39)	missense	probably damaging	1.00
IGL01558:Cebpz	APN	17	79,242,734 (GRCm39)	missense	probably damaging	1.00
IGL01724:Cebpz	APN	17	79,243,342 (GRCm39)	missense	probably benign	0.01
IGL01938:Cebpz	APN	17	79,242,390 (GRCm39)	nonsense	probably null
IGL02165:Cebpz	APN	17	79,229,598 (GRCm39)	missense	probably damaging	1.00
IGL02397:Cebpz	APN	17	79,230,690 (GRCm39)	missense	possibly damaging	0.63
IGL02455:Cebpz	APN	17	79,242,465 (GRCm39)	missense	probably benign	0.16
IGL02690:Cebpz	APN	17	79,229,986 (GRCm39)	missense	probably damaging	1.00
IGL02698:Cebpz	APN	17	79,243,003 (GRCm39)	missense	probably benign	0.03
IGL02755:Cebpz	APN	17	79,238,759 (GRCm39)	missense	probably damaging	1.00
IGL02827:Cebpz	APN	17	79,236,760 (GRCm39)	missense	probably damaging	1.00
IGL03149:Cebpz	APN	17	79,229,982 (GRCm39)	missense	probably benign	0.01
cedar_hill	UTSW	17	79,244,339 (GRCm39)	missense	possibly damaging	0.87
R0125:Cebpz	UTSW	17	79,227,317 (GRCm39)	missense	possibly damaging	0.95
R0138:Cebpz	UTSW	17	79,238,820 (GRCm39)	missense	probably benign
R0310:Cebpz	UTSW	17	79,233,553 (GRCm39)	missense	probably damaging	1.00
R0436:Cebpz	UTSW	17	79,243,079 (GRCm39)	missense	probably benign	0.00
R0589:Cebpz	UTSW	17	79,244,308 (GRCm39)	missense	probably damaging	1.00
R0828:Cebpz	UTSW	17	79,233,411 (GRCm39)	missense	probably benign	0.04
R1355:Cebpz	UTSW	17	79,242,753 (GRCm39)	missense	probably benign	0.01
R1367:Cebpz	UTSW	17	79,230,742 (GRCm39)	missense	probably benign
R1583:Cebpz	UTSW	17	79,242,181 (GRCm39)	missense	probably damaging	1.00
R1639:Cebpz	UTSW	17	79,242,035 (GRCm39)	missense	possibly damaging	0.49
R1818:Cebpz	UTSW	17	79,242,805 (GRCm39)	missense	probably damaging	1.00
R1885:Cebpz	UTSW	17	79,239,545 (GRCm39)	missense	probably benign	0.00
R1908:Cebpz	UTSW	17	79,242,336 (GRCm39)	nonsense	probably null
R1909:Cebpz	UTSW	17	79,242,336 (GRCm39)	nonsense	probably null
R2094:Cebpz	UTSW	17	79,242,983 (GRCm39)	missense	probably benign	0.03
R2314:Cebpz	UTSW	17	79,227,976 (GRCm39)	critical splice donor site	probably null
R2763:Cebpz	UTSW	17	79,243,358 (GRCm39)	missense	probably benign
R2874:Cebpz	UTSW	17	79,239,532 (GRCm39)	splice site	probably benign
R3807:Cebpz	UTSW	17	79,242,847 (GRCm39)	missense	probably damaging	1.00
R4012:Cebpz	UTSW	17	79,231,896 (GRCm39)	missense	probably damaging	0.98
R5344:Cebpz	UTSW	17	79,233,542 (GRCm39)	missense	possibly damaging	0.82
R5394:Cebpz	UTSW	17	79,229,634 (GRCm39)	missense	probably benign	0.34
R5711:Cebpz	UTSW	17	79,242,040 (GRCm39)	missense	probably damaging	1.00
R6238:Cebpz	UTSW	17	79,244,339 (GRCm39)	missense	possibly damaging	0.87
R6257:Cebpz	UTSW	17	79,243,261 (GRCm39)	missense	probably benign	0.17
R6825:Cebpz	UTSW	17	79,227,392 (GRCm39)	missense	probably damaging	1.00
R7735:Cebpz	UTSW	17	79,233,342 (GRCm39)	critical splice donor site	probably null
R7994:Cebpz	UTSW	17	79,242,028 (GRCm39)	missense	probably damaging	0.99
R8045:Cebpz	UTSW	17	79,239,585 (GRCm39)	missense	probably damaging	0.96
R8210:Cebpz	UTSW	17	79,230,685 (GRCm39)	missense	probably benign	0.20
R8694:Cebpz	UTSW	17	79,234,334 (GRCm39)	missense	probably damaging	1.00
R8712:Cebpz	UTSW	17	79,229,081 (GRCm39)	missense	possibly damaging	0.81
R8774:Cebpz	UTSW	17	79,229,073 (GRCm39)	missense	probably benign	0.09
R8774-TAIL:Cebpz	UTSW	17	79,229,073 (GRCm39)	missense	probably benign	0.09
R9058:Cebpz	UTSW	17	79,243,227 (GRCm39)	missense	probably benign	0.00
R9514:Cebpz	UTSW	17	79,239,684 (GRCm39)	missense	probably benign	0.02

Predicted Primers

PCR Primer
(F):5'- CTGTACATGTTGGGCTCTGAAG -3'
(R):5'- TTTGTGTACCGAAATCCAAAGC -3'

Sequencing Primer
(F):5'- GGCAGAATGGTTTAACTGCC -3'
(R):5'- TCCAAAGCTACATAAAGGCAAAGG -3'

Posted On

2017-02-15