Mutagenetix > Incidental Mutation

Incidental Mutation 'R5891:Bcl9'

457157

Institutional Source

Beutler Lab

Gene Symbol

Bcl9

Ensembl Gene

ENSMUSG00000038256

Gene Name

B cell CLL/lymphoma 9

Synonyms

2610202E01Rik, A330041G23Rik, 8030475K17Rik

MMRRC Submission

044092-MU

Accession Numbers

Essential gene?

Probably essential (E-score: 0.931) question?

Stock #

R5891 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

97110978-97205233 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 97116204 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Leucine to Proline at position 830 (L830P)

Ref Sequence

ENSEMBL: ENSMUSP00000131692 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000046521] [ENSMUST00000166341]

AlphaFold

Q9D219

Predicted Effect

probably damaging
Transcript: ENSMUST00000046521
AA Change: L830P

PolyPhen 2 Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)

SMART Domains

Protein: ENSMUSP00000046152
Gene: ENSMUSG00000038256
AA Change: L830P

Domain	Start	End	E-Value	Type
low complexity region	49	63	N/A	INTRINSIC
low complexity region	86	98	N/A	INTRINSIC
low complexity region	144	157	N/A	INTRINSIC
PDB:2VP7\|B	174	205	4e-13	PDB
low complexity region	229	247	N/A	INTRINSIC
low complexity region	255	273	N/A	INTRINSIC
low complexity region	321	342	N/A	INTRINSIC
Pfam:BCL9	350	389	3.1e-24	PFAM
low complexity region	481	494	N/A	INTRINSIC
low complexity region	506	517	N/A	INTRINSIC
low complexity region	817	835	N/A	INTRINSIC
low complexity region	891	902	N/A	INTRINSIC
low complexity region	985	1001	N/A	INTRINSIC
low complexity region	1032	1044	N/A	INTRINSIC
low complexity region	1135	1153	N/A	INTRINSIC
low complexity region	1156	1177	N/A	INTRINSIC
low complexity region	1257	1268	N/A	INTRINSIC
low complexity region	1281	1299	N/A	INTRINSIC
low complexity region	1371	1391	N/A	INTRINSIC

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000132266

Predicted Effect

probably damaging
Transcript: ENSMUST00000166341
AA Change: L830P

PolyPhen 2 Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)

SMART Domains

Protein: ENSMUSP00000131692
Gene: ENSMUSG00000038256
AA Change: L830P

Domain	Start	End	E-Value	Type
low complexity region	49	63	N/A	INTRINSIC
low complexity region	86	98	N/A	INTRINSIC
low complexity region	144	157	N/A	INTRINSIC
PDB:2VP7\|B	174	205	4e-13	PDB
low complexity region	229	247	N/A	INTRINSIC
low complexity region	255	273	N/A	INTRINSIC
low complexity region	321	342	N/A	INTRINSIC
Pfam:BCL9	350	388	5.2e-22	PFAM
low complexity region	481	494	N/A	INTRINSIC
low complexity region	506	517	N/A	INTRINSIC
low complexity region	817	835	N/A	INTRINSIC
low complexity region	891	902	N/A	INTRINSIC
low complexity region	985	1001	N/A	INTRINSIC
low complexity region	1032	1044	N/A	INTRINSIC
low complexity region	1135	1153	N/A	INTRINSIC
low complexity region	1156	1177	N/A	INTRINSIC
low complexity region	1257	1268	N/A	INTRINSIC
low complexity region	1281	1299	N/A	INTRINSIC
low complexity region	1371	1391	N/A	INTRINSIC

Meta Mutation Damage Score

0.0741

Coding Region Coverage

1x: 99.9%
3x: 99.5%
10x: 97.7%
20x: 92.9%

Validation Efficiency

96% (85/89)

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] BCL9 is associated with B-cell acute lymphoblastic leukemia. It may be a target of translocation in B-cell malignancies with abnormalities of 1q21. Its function is unknown. The overexpression of BCL9 may be of pathogenic significance in B-cell malignancies. [provided by RefSeq, Jul 2008]
PHENOTYPE: Mice carrying homozygous floxed Bcl9 and Bcl9l alleles, inactivated in muscle cells, exhibit impaired muscle regeneration due to increased apoptosis. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 80 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abi3bp	A	T	16: 56,426,496 (GRCm39)	T504S	probably damaging	Het
Adamtsl4	C	A	3: 95,589,623 (GRCm39)	R387L	possibly damaging	Het
Adgb	G	A	10: 10,253,591 (GRCm39)	Q1224*	probably null	Het
Ankrd40	T	A	11: 94,225,689 (GRCm39)	F240Y	probably damaging	Het
Asnsd1	A	T	1: 53,387,136 (GRCm39)	Y164N	probably benign	Het
Atf7ip	A	T	6: 136,536,975 (GRCm39)	E69D	possibly damaging	Het
Atm	T	C	9: 53,408,459 (GRCm39)	T1129A	probably benign	Het
Atosa	C	G	9: 74,911,668 (GRCm39)	C46W	probably damaging	Het
AU021092	T	C	16: 5,029,995 (GRCm39)	D340G	probably benign	Het
Baz2a	T	A	10: 127,957,191 (GRCm39)	I978N	probably damaging	Het
BC034090	T	C	1: 155,108,793 (GRCm39)		probably benign	Het
Bicral	T	C	17: 47,112,155 (GRCm39)	N1015S	probably benign	Het
Ccdc9b	T	A	2: 118,591,864 (GRCm39)	D92V	probably damaging	Het
Ceacam3	C	A	7: 16,885,718 (GRCm39)	T107N	probably damaging	Het
Cep83	T	C	10: 94,561,537 (GRCm39)	V109A	probably benign	Het
Ces1e	A	G	8: 93,929,894 (GRCm39)	V463A	possibly damaging	Het
Ciao1	A	G	2: 127,089,054 (GRCm39)	V55A	probably benign	Het
Col19a1	T	C	1: 24,328,806 (GRCm39)	E900G	probably damaging	Het
Commd3	A	G	2: 18,678,626 (GRCm39)		probably benign	Het
Coro1c	A	G	5: 113,988,872 (GRCm39)	I157T	probably damaging	Het
Cplane1	A	G	15: 8,218,073 (GRCm39)	I828V	probably benign	Het
Ctso	T	A	3: 81,861,561 (GRCm39)	F311L	probably benign	Het
Cxcl10	A	G	5: 92,496,083 (GRCm39)		probably benign	Het
Daam1	C	A	12: 71,990,923 (GRCm39)	T179N	unknown	Het
Ddx24	T	C	12: 103,390,317 (GRCm39)	K225E	probably damaging	Het
Dnajc16	T	C	4: 141,502,703 (GRCm39)	T278A	probably benign	Het
Dnajc2	A	T	5: 21,966,709 (GRCm39)	N345K	possibly damaging	Het
Dnpep	G	T	1: 75,288,456 (GRCm39)	Q395K	probably benign	Het
Dync1h1	T	C	12: 110,580,654 (GRCm39)		probably null	Het
Exoc1	A	G	5: 76,689,991 (GRCm39)	D177G	probably damaging	Het
Fam135b	C	T	15: 71,397,652 (GRCm39)	R136H	probably damaging	Het
Filip1	T	G	9: 79,727,142 (GRCm39)	L492F	possibly damaging	Het
Flvcr2	A	T	12: 85,843,002 (GRCm39)	I359F	possibly damaging	Het
Gmcl1	A	G	6: 86,684,425 (GRCm39)	W366R	probably damaging	Het
Htt	A	G	5: 35,028,167 (GRCm39)	T1808A	possibly damaging	Het
Ighv5-4	C	A	12: 113,561,249 (GRCm39)	R57L	probably damaging	Het
Il12rb2	A	T	6: 67,337,674 (GRCm39)	I69N	probably damaging	Het
Irf5	A	T	6: 29,529,424 (GRCm39)		probably benign	Het
Kif13b	T	G	14: 65,025,854 (GRCm39)		probably null	Het
Klkb1	T	A	8: 45,723,703 (GRCm39)	T571S	probably benign	Het
Mapkbp1	G	T	2: 119,854,413 (GRCm39)	E1337*	probably null	Het
Met	A	G	6: 17,491,538 (GRCm39)	D100G	probably benign	Het
Mgam	T	A	6: 40,721,282 (GRCm39)	D183E	probably benign	Het
Mrgprb13	T	C	7: 47,962,007 (GRCm39)		noncoding transcript	Het
Mrgprx2	T	C	7: 48,131,994 (GRCm39)	T275A	probably benign	Het
Mroh2a	C	A	1: 88,169,337 (GRCm39)	Q671K	possibly damaging	Het
Nckipsd	T	A	9: 108,685,808 (GRCm39)	S42R	probably damaging	Het
Nlrp12	T	A	7: 3,267,933 (GRCm39)		probably benign	Het
Or12j2	C	T	7: 139,916,513 (GRCm39)	T246I	probably benign	Het
Or12k8	T	A	2: 36,974,990 (GRCm39)	M257L	probably benign	Het
Or4k47	A	T	2: 111,451,778 (GRCm39)	L214M	probably damaging	Het
Or5p5	C	T	7: 107,414,387 (GRCm39)	P199S	probably damaging	Het
Otoa	T	A	7: 120,731,583 (GRCm39)		probably null	Het
Pfkm	T	A	15: 98,020,571 (GRCm39)	C233*	probably null	Het
Pikfyve	A	G	1: 65,241,896 (GRCm39)	Y212C	probably damaging	Het
Ptprq	T	A	10: 107,412,756 (GRCm39)	D1781V	possibly damaging	Het
Pttg1ip	A	G	10: 77,418,274 (GRCm39)		probably benign	Het
Rab6a	T	A	7: 100,288,454 (GRCm39)		probably null	Het
Rbm11	C	T	16: 75,395,725 (GRCm39)	A132V	possibly damaging	Het
Septin4	G	T	11: 87,479,750 (GRCm39)		probably benign	Het
Serpinb8	A	G	1: 107,533,575 (GRCm39)	E210G	probably damaging	Het
Sertad2	G	A	11: 20,597,884 (GRCm39)	G27S	probably benign	Het
Slco5a1	A	G	1: 13,060,626 (GRCm39)	F32L	probably benign	Het
Smad2	A	G	18: 76,433,046 (GRCm39)	E326G	probably damaging	Het
Sp9	T	A	2: 73,104,595 (GRCm39)	L383Q	probably damaging	Het
Stx11	T	C	10: 12,817,559 (GRCm39)	N55S	probably damaging	Het
Tbc1d15	T	A	10: 115,056,213 (GRCm39)	Q253L	probably benign	Het
Tcf7l1	T	A	6: 72,614,034 (GRCm39)		probably benign	Het
Tdrd9	T	A	12: 112,009,153 (GRCm39)	S1020T	probably damaging	Het
Tead3	A	T	17: 28,560,339 (GRCm39)	D88E	probably damaging	Het
Tnrc18	A	G	5: 142,800,926 (GRCm39)	S11P	probably damaging	Homo
Trpc3	G	T	3: 36,725,171 (GRCm39)	D268E	probably damaging	Het
Ttn	A	G	2: 76,576,085 (GRCm39)	V23190A	possibly damaging	Het
Ubr4	T	A	4: 139,135,937 (GRCm39)	Y908*	probably null	Het
Urb2	G	T	8: 124,757,595 (GRCm39)	V1101L	possibly damaging	Het
Usp9y	A	T	Y: 1,341,535 (GRCm39)	D1375E	probably benign	Het
Zcchc7	T	C	4: 44,895,838 (GRCm39)	L262P	probably damaging	Het
Zdhhc7	T	A	8: 120,811,639 (GRCm39)	H188L	probably benign	Het
Zfp518a	T	A	19: 40,900,877 (GRCm39)	C269S	probably damaging	Het
Zfp933	T	C	4: 147,911,231 (GRCm39)	K90E	probably benign	Het

Other mutations in Bcl9

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00553:Bcl9	APN	3	97,114,518 (GRCm39)	missense	probably damaging	1.00
IGL00817:Bcl9	APN	3	97,112,460 (GRCm39)	missense	probably damaging	0.97
IGL01609:Bcl9	APN	3	97,116,291 (GRCm39)	missense	probably benign	0.23
IGL02245:Bcl9	APN	3	97,116,009 (GRCm39)	missense	probably damaging	1.00
IGL02385:Bcl9	APN	3	97,116,594 (GRCm39)	missense	probably benign	0.01
IGL02534:Bcl9	APN	3	97,122,545 (GRCm39)	missense	probably damaging	1.00
IGL02663:Bcl9	APN	3	97,112,648 (GRCm39)	missense	probably damaging	1.00
IGL02705:Bcl9	APN	3	97,112,181 (GRCm39)	missense	possibly damaging	0.94
IGL02884:Bcl9	APN	3	97,117,368 (GRCm39)	missense	probably damaging	1.00
IGL03345:Bcl9	APN	3	97,116,508 (GRCm39)	missense	probably benign
R0312:Bcl9	UTSW	3	97,116,727 (GRCm39)	missense	probably benign	0.27
R0602:Bcl9	UTSW	3	97,113,102 (GRCm39)	missense	probably benign	0.00
R0627:Bcl9	UTSW	3	97,112,789 (GRCm39)	missense	probably damaging	1.00
R0644:Bcl9	UTSW	3	97,117,813 (GRCm39)	missense	probably benign
R1342:Bcl9	UTSW	3	97,113,042 (GRCm39)	missense	possibly damaging	0.93
R1836:Bcl9	UTSW	3	97,113,186 (GRCm39)	missense	probably damaging	0.97
R1886:Bcl9	UTSW	3	97,122,713 (GRCm39)	missense	probably benign	0.04
R1931:Bcl9	UTSW	3	97,112,460 (GRCm39)	missense	probably damaging	0.97
R1972:Bcl9	UTSW	3	97,114,518 (GRCm39)	missense	probably damaging	1.00
R1984:Bcl9	UTSW	3	97,121,050 (GRCm39)	missense	probably damaging	0.98
R2119:Bcl9	UTSW	3	97,116,231 (GRCm39)	missense	probably benign	0.04
R2924:Bcl9	UTSW	3	97,117,069 (GRCm39)	missense	probably benign	0.00
R3081:Bcl9	UTSW	3	97,112,989 (GRCm39)	missense	possibly damaging	0.82
R3851:Bcl9	UTSW	3	97,116,969 (GRCm39)	missense	probably damaging	0.99
R4182:Bcl9	UTSW	3	97,120,999 (GRCm39)	critical splice donor site	probably null
R4196:Bcl9	UTSW	3	97,123,684 (GRCm39)	utr 5 prime	probably benign
R4209:Bcl9	UTSW	3	97,117,269 (GRCm39)	missense	probably damaging	1.00
R5082:Bcl9	UTSW	3	97,117,218 (GRCm39)	missense	probably damaging	0.97
R5440:Bcl9	UTSW	3	97,117,881 (GRCm39)	missense	probably benign
R5770:Bcl9	UTSW	3	97,122,491 (GRCm39)	missense	probably benign
R5863:Bcl9	UTSW	3	97,117,666 (GRCm39)	missense	probably benign
R6086:Bcl9	UTSW	3	97,112,840 (GRCm39)	missense	possibly damaging	0.73
R6305:Bcl9	UTSW	3	97,113,254 (GRCm39)	missense	possibly damaging	0.73
R6626:Bcl9	UTSW	3	97,122,712 (GRCm39)	missense	probably benign	0.00
R7198:Bcl9	UTSW	3	97,116,183 (GRCm39)	missense	probably damaging	0.99
R7198:Bcl9	UTSW	3	97,112,511 (GRCm39)	missense	possibly damaging	0.87
R7548:Bcl9	UTSW	3	97,113,209 (GRCm39)	missense	probably damaging	1.00
R7897:Bcl9	UTSW	3	97,112,567 (GRCm39)	missense	possibly damaging	0.92
R8299:Bcl9	UTSW	3	97,112,852 (GRCm39)	missense	probably damaging	0.97
R8332:Bcl9	UTSW	3	97,117,086 (GRCm39)	missense	possibly damaging	0.74
R8519:Bcl9	UTSW	3	97,116,334 (GRCm39)	missense	probably benign
R9057:Bcl9	UTSW	3	97,112,306 (GRCm39)	missense	possibly damaging	0.86
R9079:Bcl9	UTSW	3	97,112,816 (GRCm39)	missense	probably damaging	1.00
R9273:Bcl9	UTSW	3	97,115,959 (GRCm39)	missense	probably damaging	1.00
R9367:Bcl9	UTSW	3	97,117,861 (GRCm39)	missense	probably benign	0.22
R9399:Bcl9	UTSW	3	97,113,289 (GRCm39)	missense	probably benign	0.00
R9597:Bcl9	UTSW	3	97,117,323 (GRCm39)	missense	probably benign	0.01
R9643:Bcl9	UTSW	3	97,112,960 (GRCm39)	missense	possibly damaging	0.77
X0011:Bcl9	UTSW	3	97,113,290 (GRCm39)	missense	probably benign	0.05
Z1088:Bcl9	UTSW	3	97,117,957 (GRCm39)	missense	possibly damaging	0.50

Predicted Primers

PCR Primer
(F):5'- CAGCTGTGATGGAGTCTGAG -3'
(R):5'- AGCTCAGAAATGCTGCCTGC -3'

Sequencing Primer
(F):5'- CTGAGGGGACTTGAGGTTCC -3'
(R):5'- CCTGCCATTTGGTGAGCAC -3'

Posted On

2017-02-15