Incidental Mutation 'R5918:Crip1'
ID 461488
Institutional Source Beutler Lab
Gene Symbol Crip1
Ensembl Gene ENSMUSG00000006360
Gene Name cysteine-rich protein 1
Synonyms CRP1, Crip
MMRRC Submission 044115-MU
Accession Numbers
Essential gene? Possibly non essential (E-score: 0.350) question?
Stock # R5918 (G1)
Quality Score 225
Status Validated
Chromosome 12
Chromosomal Location 113115632-113117499 bp(+) (GRCm39)
Type of Mutation splice site (3 bp from exon)
DNA Base Change (assembly) A to C at 113117287 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000142803 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000006523] [ENSMUST00000049271] [ENSMUST00000196755] [ENSMUST00000199089] [ENSMUST00000200522] [ENSMUST00000200553]
AlphaFold P63254
Predicted Effect probably null
Transcript: ENSMUST00000006523
SMART Domains Protein: ENSMUSP00000006523
Gene: ENSMUSG00000006360

DomainStartEndE-ValueType
LIM 3 55 2e-14 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000049271
SMART Domains Protein: ENSMUSP00000035351
Gene: ENSMUSG00000037466

DomainStartEndE-ValueType
low complexity region 2 21 N/A INTRINSIC
Pfam:DUF4509 41 221 4.8e-65 PFAM
low complexity region 233 245 N/A INTRINSIC
Pfam:DUF4510 258 418 3.1e-73 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000196505
Predicted Effect probably benign
Transcript: ENSMUST00000196755
SMART Domains Protein: ENSMUSP00000143431
Gene: ENSMUSG00000037466

DomainStartEndE-ValueType
low complexity region 1 20 N/A INTRINSIC
Pfam:DUF4509 40 138 4.1e-32 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000196932
Predicted Effect noncoding transcript
Transcript: ENSMUST00000198072
Predicted Effect probably null
Transcript: ENSMUST00000199089
SMART Domains Protein: ENSMUSP00000142803
Gene: ENSMUSG00000006360

DomainStartEndE-ValueType
LIM 54 106 9.5e-17 SMART
Predicted Effect noncoding transcript
Transcript: ENSMUST00000198909
Predicted Effect noncoding transcript
Transcript: ENSMUST00000198597
Predicted Effect noncoding transcript
Transcript: ENSMUST00000199382
Predicted Effect probably benign
Transcript: ENSMUST00000200522
Predicted Effect probably benign
Transcript: ENSMUST00000200553
SMART Domains Protein: ENSMUSP00000143680
Gene: ENSMUSG00000006360

DomainStartEndE-ValueType
LIM 3 55 2e-14 SMART
Meta Mutation Damage Score 0.9755 question?
Coding Region Coverage
  • 1x: 99.9%
  • 3x: 99.5%
  • 10x: 97.8%
  • 20x: 93.6%
Validation Efficiency 93% (66/71)
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] Cysteine-rich intestinal protein (CRIP) belongs to the LIM/double zinc finger protein family, members of which include cysteine- and glycine-rich protein-1 (CSRP1; MIM 123876), rhombotin-1 (RBTN1; MIM 186921), rhombotin-2 (RBTN2; MIM 180385), and rhombotin-3 (RBTN3; MIM 180386). CRIP may be involved in intestinal zinc transport (Hempe and Cousins, 1991 [PubMed 1946385]).[supplied by OMIM, Mar 2008]
Allele List at MGI

All alleles(8) : Targeted(2) Gene trapped(6)

Other mutations in this stock
Total: 60 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Afap1 A T 5: 36,131,869 (GRCm39) I399F possibly damaging Het
Aknad1 C T 3: 108,659,703 (GRCm39) P239L probably benign Het
Ankrd9 A G 12: 110,943,200 (GRCm39) V245A probably benign Het
Anxa1 T C 19: 20,355,857 (GRCm39) probably benign Het
Arhgef2 A G 3: 88,543,387 (GRCm39) K454R probably damaging Het
AU040320 A G 4: 126,708,064 (GRCm39) T227A probably benign Het
Bbs2 C T 8: 94,824,931 (GRCm39) R17H probably damaging Het
Bcl2l12 A G 7: 44,640,888 (GRCm39) probably benign Het
C1qtnf9 G T 14: 61,009,737 (GRCm39) probably benign Het
Ccdc38 C G 10: 93,406,748 (GRCm39) Y219* probably null Het
Ceacam3 G T 7: 16,893,670 (GRCm39) D394Y probably damaging Het
Dnah7b T C 1: 46,260,803 (GRCm39) V1987A probably benign Het
Dnah9 C A 11: 65,725,025 (GRCm39) C4376F probably damaging Het
Galnt9 T C 5: 110,763,332 (GRCm39) F446L probably damaging Het
Garin1a A G 6: 29,285,942 (GRCm39) R76G probably null Het
Gm14322 A G 2: 177,411,499 (GRCm39) D103G probably benign Het
Gpa33 T C 1: 165,958,107 (GRCm39) probably null Het
Lactb2 T A 1: 13,720,954 (GRCm39) I93F probably benign Het
Lifr A T 15: 7,188,897 (GRCm39) T93S probably benign Het
Lmbr1l A T 15: 98,810,308 (GRCm39) I101N probably damaging Het
Lrrc8c G A 5: 105,756,117 (GRCm39) V631M possibly damaging Het
Mctp2 A C 7: 71,878,288 (GRCm39) D263E probably damaging Het
Nbeal1 T A 1: 60,307,051 (GRCm39) I1627N possibly damaging Het
Neb T C 2: 52,087,906 (GRCm39) Y5188C probably damaging Het
Nf1 T C 11: 79,460,048 (GRCm39) probably benign Het
Nr6a1 T C 2: 38,629,103 (GRCm39) D250G probably damaging Het
Ola1 T C 2: 72,987,128 (GRCm39) E168G probably benign Het
Or1a1 T C 11: 74,086,944 (GRCm39) V205A probably damaging Het
Or2d2b T A 7: 106,705,828 (GRCm39) Q80L probably damaging Het
Or4k2 A G 14: 50,424,425 (GRCm39) I83T probably benign Het
Or7g22 T C 9: 19,048,684 (GRCm39) Y132H probably damaging Het
Or9i1b T A 19: 13,897,139 (GRCm39) F252I probably damaging Het
Pik3r6 C T 11: 68,416,497 (GRCm39) Q29* probably null Het
Ppargc1a C T 5: 51,620,579 (GRCm39) probably benign Het
Ppl C T 16: 4,922,765 (GRCm39) R242H probably benign Het
Ppp1r37 G T 7: 19,266,036 (GRCm39) Q577K probably benign Het
Prcd A G 11: 116,548,366 (GRCm39) E25G probably damaging Het
Prpsap2 C T 11: 61,627,870 (GRCm39) R202H probably damaging Het
Ptgs1 A C 2: 36,141,089 (GRCm39) E512A probably damaging Het
Radil T G 5: 142,473,357 (GRCm39) I535L probably benign Het
Rbl2 G T 8: 91,816,758 (GRCm39) V373F probably benign Het
Ryr1 T C 7: 28,708,577 (GRCm39) Y4802C probably benign Het
Sdc2 A G 15: 33,028,313 (GRCm39) T144A probably benign Het
Senp6 T C 9: 80,021,398 (GRCm39) probably null Het
Sipa1l3 T C 7: 29,096,631 (GRCm39) D531G probably damaging Het
Slc22a27 C A 19: 7,887,411 (GRCm39) C189F possibly damaging Het
Srcin1 T C 11: 97,424,323 (GRCm39) probably null Het
Svep1 C T 4: 58,069,345 (GRCm39) E2814K possibly damaging Het
Tjp3 T G 10: 81,113,746 (GRCm39) H504P probably benign Het
Tmprss4 T A 9: 45,086,414 (GRCm39) K378* probably null Het
Tns4 C T 11: 98,964,497 (GRCm39) probably null Het
Ttn T C 2: 76,580,298 (GRCm39) T15205A possibly damaging Het
Ush2a G T 1: 188,089,011 (GRCm39) G322V probably benign Het
Vac14 A T 8: 111,363,104 (GRCm39) probably null Het
Vmn1r175 T G 7: 23,508,372 (GRCm39) D85A probably damaging Het
Vmn2r93 T C 17: 18,546,030 (GRCm39) L634P probably damaging Het
Zeb2 A T 2: 45,001,271 (GRCm39) probably benign Het
Zfp616 T A 11: 73,974,086 (GRCm39) H118Q possibly damaging Het
Zfp945 T A 17: 23,069,955 (GRCm39) H648L probably damaging Het
Zscan29 G T 2: 120,994,518 (GRCm39) T489N probably damaging Het
Other mutations in Crip1
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00469:Crip1 APN 12 113,115,755 (GRCm39) missense probably damaging 1.00
IGL00562:Crip1 APN 12 113,117,232 (GRCm39) splice site probably null
IGL00563:Crip1 APN 12 113,117,232 (GRCm39) splice site probably null
R0030:Crip1 UTSW 12 113,116,996 (GRCm39) critical splice donor site probably null
R1879:Crip1 UTSW 12 113,116,952 (GRCm39) missense probably damaging 1.00
R4542:Crip1 UTSW 12 113,117,109 (GRCm39) missense probably damaging 1.00
Predicted Primers PCR Primer
(F):5'- AGGCAAGCCCTACTGCAATC -3'
(R):5'- TTAAAGGCACTGAGGGTTCC -3'

Sequencing Primer
(F):5'- GCTACTCCGCCATGTTTGGG -3'
(R):5'- ACTGAGGGTTCCCGAGAG -3'
Posted On 2017-02-28