Incidental Mutation 'R5923:Vmn2r24'
ID 461674
Institutional Source Beutler Lab
Gene Symbol Vmn2r24
Ensembl Gene ENSMUSG00000072780
Gene Name vomeronasal 2, receptor 24
Synonyms EG243628
MMRRC Submission 043241-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.055) question?
Stock # R5923 (G1)
Quality Score 225
Status Not validated
Chromosome 6
Chromosomal Location 123755930-123793239 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to G at 123792751 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Serine to Glycine at position 693 (S693G)
Ref Sequence ENSEMBL: ENSMUSP00000074602 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000075095]
AlphaFold D3YUI0
Predicted Effect probably damaging
Transcript: ENSMUST00000075095
AA Change: S693G

PolyPhen 2 Score 0.958 (Sensitivity: 0.78; Specificity: 0.95)
SMART Domains Protein: ENSMUSP00000074602
Gene: ENSMUSG00000072780
AA Change: S693G

DomainStartEndE-ValueType
signal peptide 1 22 N/A INTRINSIC
Pfam:ANF_receptor 82 469 1.6e-32 PFAM
Pfam:NCD3G 518 571 1.1e-22 PFAM
Pfam:7tm_3 602 839 1.1e-54 PFAM
Coding Region Coverage
  • 1x: 99.8%
  • 3x: 99.4%
  • 10x: 97.3%
  • 20x: 91.6%
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 33 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
4921513I03Rik T G 10: 120,614,675 (GRCm39) probably benign Het
Abca9 A G 11: 110,051,378 (GRCm39) V106A probably benign Het
Arnt2 G T 7: 83,911,741 (GRCm39) T577K probably benign Het
Bod1l G A 5: 41,974,762 (GRCm39) T2184I probably damaging Het
Brpf3 G A 17: 29,025,610 (GRCm39) V228I possibly damaging Het
Cacna1d T C 14: 29,833,105 (GRCm39) N890S probably damaging Het
Cacna1s T A 1: 136,004,560 (GRCm39) M120K possibly damaging Het
Cdr2 A G 7: 120,581,224 (GRCm39) Y18H probably damaging Het
Cilp2 A G 8: 70,335,525 (GRCm39) F491S probably damaging Het
Cubn A T 2: 13,490,889 (GRCm39) S185T possibly damaging Het
Dst T C 1: 34,220,840 (GRCm39) S2215P probably benign Het
Echdc3 A G 2: 6,194,383 (GRCm39) V224A possibly damaging Het
Hivep3 G T 4: 119,953,490 (GRCm39) S602I possibly damaging Het
Itga2 T C 13: 115,021,055 (GRCm39) S99G probably benign Het
Kat6a A G 8: 23,429,495 (GRCm39) T1617A probably benign Het
Map1b T C 13: 99,569,661 (GRCm39) E1020G unknown Het
Nbeal1 T C 1: 60,287,554 (GRCm39) F933L probably damaging Het
Ntrk3 A T 7: 78,101,676 (GRCm39) I419N possibly damaging Het
Nup188 A G 2: 30,194,102 (GRCm39) I136V probably benign Het
Or8b38 T A 9: 37,973,154 (GRCm39) D179E probably benign Het
Plcb4 A T 2: 135,803,734 (GRCm39) K536* probably null Het
Polk A T 13: 96,631,923 (GRCm39) I270N probably damaging Het
Prl6a1 A T 13: 27,500,346 (GRCm39) M106L probably benign Het
Scap G T 9: 110,212,648 (GRCm39) D1027Y probably damaging Het
Spg11 A T 2: 121,923,959 (GRCm39) H787Q probably damaging Het
Tatdn3 T C 1: 190,781,507 (GRCm39) D215G probably damaging Het
Tbcd G A 11: 121,470,978 (GRCm39) C665Y probably benign Het
Tmc8 C T 11: 117,674,638 (GRCm39) R118C probably damaging Het
Ttn T A 2: 76,642,901 (GRCm39) H13245L probably damaging Het
Unc79 T C 12: 103,078,727 (GRCm39) S1631P probably damaging Het
Vmn1r12 G A 6: 57,136,020 (GRCm39) G39D probably benign Het
Zc3h3 G T 15: 75,657,413 (GRCm39) R593S probably damaging Het
Zfp598 T C 17: 24,896,523 (GRCm39) L200P probably damaging Het
Other mutations in Vmn2r24
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00954:Vmn2r24 APN 6 123,792,596 (GRCm39) missense probably damaging 1.00
IGL01382:Vmn2r24 APN 6 123,763,938 (GRCm39) missense possibly damaging 0.62
IGL01592:Vmn2r24 APN 6 123,764,445 (GRCm39) missense probably benign 0.30
IGL01754:Vmn2r24 APN 6 123,781,120 (GRCm39) missense probably damaging 1.00
IGL01939:Vmn2r24 APN 6 123,764,404 (GRCm39) missense probably benign
IGL02140:Vmn2r24 APN 6 123,757,631 (GRCm39) missense probably damaging 0.98
IGL02272:Vmn2r24 APN 6 123,763,843 (GRCm39) missense possibly damaging 0.94
IGL02568:Vmn2r24 APN 6 123,792,812 (GRCm39) missense probably benign 0.36
IGL02748:Vmn2r24 APN 6 123,793,057 (GRCm39) missense possibly damaging 0.90
IGL03022:Vmn2r24 APN 6 123,755,967 (GRCm39) missense probably damaging 0.99
IGL03343:Vmn2r24 APN 6 123,793,070 (GRCm39) missense probably damaging 1.00
R0357:Vmn2r24 UTSW 6 123,792,369 (GRCm39) frame shift probably null
R0453:Vmn2r24 UTSW 6 123,757,350 (GRCm39) critical splice acceptor site probably null
R0538:Vmn2r24 UTSW 6 123,793,012 (GRCm39) missense probably benign 0.32
R0607:Vmn2r24 UTSW 6 123,763,893 (GRCm39) missense probably benign
R1381:Vmn2r24 UTSW 6 123,763,692 (GRCm39) missense probably damaging 1.00
R1589:Vmn2r24 UTSW 6 123,783,479 (GRCm39) splice site probably benign
R1848:Vmn2r24 UTSW 6 123,793,183 (GRCm39) missense probably damaging 1.00
R2035:Vmn2r24 UTSW 6 123,793,019 (GRCm39) missense probably damaging 1.00
R2077:Vmn2r24 UTSW 6 123,792,358 (GRCm39) missense probably damaging 1.00
R2122:Vmn2r24 UTSW 6 123,792,353 (GRCm39) missense possibly damaging 0.81
R2145:Vmn2r24 UTSW 6 123,755,972 (GRCm39) missense probably benign
R2483:Vmn2r24 UTSW 6 123,792,997 (GRCm39) missense probably damaging 1.00
R2512:Vmn2r24 UTSW 6 123,763,985 (GRCm39) missense probably benign 0.01
R3001:Vmn2r24 UTSW 6 123,781,231 (GRCm39) missense probably benign 0.00
R3002:Vmn2r24 UTSW 6 123,781,231 (GRCm39) missense probably benign 0.00
R3236:Vmn2r24 UTSW 6 123,755,984 (GRCm39) nonsense probably null
R3623:Vmn2r24 UTSW 6 123,792,997 (GRCm39) missense probably damaging 1.00
R3624:Vmn2r24 UTSW 6 123,792,997 (GRCm39) missense probably damaging 1.00
R3835:Vmn2r24 UTSW 6 123,764,412 (GRCm39) missense probably benign 0.33
R4074:Vmn2r24 UTSW 6 123,764,374 (GRCm39) missense possibly damaging 0.92
R4075:Vmn2r24 UTSW 6 123,764,374 (GRCm39) missense possibly damaging 0.92
R4812:Vmn2r24 UTSW 6 123,756,144 (GRCm39) missense probably benign 0.00
R4825:Vmn2r24 UTSW 6 123,792,739 (GRCm39) missense probably benign 0.02
R5351:Vmn2r24 UTSW 6 123,793,223 (GRCm39) missense possibly damaging 0.80
R5665:Vmn2r24 UTSW 6 123,763,938 (GRCm39) missense possibly damaging 0.62
R5790:Vmn2r24 UTSW 6 123,792,499 (GRCm39) missense probably benign
R5808:Vmn2r24 UTSW 6 123,792,597 (GRCm39) nonsense probably null
R5879:Vmn2r24 UTSW 6 123,764,226 (GRCm39) missense possibly damaging 0.89
R5969:Vmn2r24 UTSW 6 123,755,981 (GRCm39) missense probably benign 0.00
R6050:Vmn2r24 UTSW 6 123,792,691 (GRCm39) missense probably damaging 1.00
R6171:Vmn2r24 UTSW 6 123,764,205 (GRCm39) missense probably damaging 0.98
R6174:Vmn2r24 UTSW 6 123,793,236 (GRCm39) missense probably benign 0.00
R6356:Vmn2r24 UTSW 6 123,783,368 (GRCm39) missense possibly damaging 0.93
R6562:Vmn2r24 UTSW 6 123,757,386 (GRCm39) missense probably benign 0.01
R6563:Vmn2r24 UTSW 6 123,781,137 (GRCm39) missense possibly damaging 0.86
R6584:Vmn2r24 UTSW 6 123,792,764 (GRCm39) missense possibly damaging 0.53
R6630:Vmn2r24 UTSW 6 123,763,981 (GRCm39) missense probably benign 0.00
R6803:Vmn2r24 UTSW 6 123,755,960 (GRCm39) missense possibly damaging 0.64
R6864:Vmn2r24 UTSW 6 123,756,117 (GRCm39) missense possibly damaging 0.89
R7252:Vmn2r24 UTSW 6 123,764,191 (GRCm39) missense possibly damaging 0.90
R7369:Vmn2r24 UTSW 6 123,792,638 (GRCm39) missense probably damaging 0.99
R7646:Vmn2r24 UTSW 6 123,793,169 (GRCm39) missense probably benign 0.20
R7799:Vmn2r24 UTSW 6 123,757,422 (GRCm39) missense probably benign 0.00
R7803:Vmn2r24 UTSW 6 123,757,438 (GRCm39) missense probably benign 0.00
R7959:Vmn2r24 UTSW 6 123,755,949 (GRCm39) missense possibly damaging 0.86
R8215:Vmn2r24 UTSW 6 123,756,077 (GRCm39) missense probably benign 0.10
R8796:Vmn2r24 UTSW 6 123,757,500 (GRCm39) missense probably benign
R9172:Vmn2r24 UTSW 6 123,783,432 (GRCm39) missense probably damaging 1.00
R9300:Vmn2r24 UTSW 6 123,793,030 (GRCm39) missense possibly damaging 0.46
R9369:Vmn2r24 UTSW 6 123,792,357 (GRCm39) missense probably damaging 1.00
R9375:Vmn2r24 UTSW 6 123,792,542 (GRCm39) missense probably damaging 1.00
R9523:Vmn2r24 UTSW 6 123,763,950 (GRCm39) missense possibly damaging 0.89
R9546:Vmn2r24 UTSW 6 123,764,266 (GRCm39) missense probably damaging 0.98
RF006:Vmn2r24 UTSW 6 123,783,378 (GRCm39) missense probably damaging 1.00
RF016:Vmn2r24 UTSW 6 123,781,174 (GRCm39) missense probably benign 0.04
X0023:Vmn2r24 UTSW 6 123,764,359 (GRCm39) missense probably damaging 0.99
Z1088:Vmn2r24 UTSW 6 123,781,155 (GRCm39) missense probably benign 0.00
Z1177:Vmn2r24 UTSW 6 123,763,719 (GRCm39) missense probably benign 0.00
Predicted Primers PCR Primer
(F):5'- TGTCTGCTATCGGGACACATC -3'
(R):5'- TGGACCCCTCATTACAACAGAG -3'

Sequencing Primer
(F):5'- GGACACATCCATTGTCAGAGC -3'
(R):5'- CCCTCATTACAACAGAGGATGATGTG -3'
Posted On 2017-02-28