Mutagenetix > Incidental Mutation

Incidental Mutation 'R0571:Spire2'

46466

Institutional Source

Beutler Lab

Gene Symbol

Spire2

Ensembl Gene

ENSMUSG00000010154

Gene Name

spire type actin nucleation factor 2

Synonyms

Spir-2

MMRRC Submission

038762-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.129) question?

Stock #

R0571 (G1)

Quality Score

170

Status

Validated

Chromosome

Chromosomal Location

124059452-124096254 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to A at 124080855 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Isoleucine to Asparagine at position 33 (I33N)

Ref Sequence

ENSEMBL: ENSMUSP00000148710 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000010298] [ENSMUST00000127664] [ENSMUST00000212404]

AlphaFold

Q8K1S6

Predicted Effect

probably damaging
Transcript: ENSMUST00000010298
AA Change: I133N

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)

SMART Domains

Protein: ENSMUSP00000010298
Gene: ENSMUSG00000010154
AA Change: I133N

Domain	Start	End	E-Value	Type
low complexity region	2	23	N/A	INTRINSIC
KIND	26	207	2.63e-82	SMART
PDB:4EFH\|B	310	360	8e-8	PDB
low complexity region	419	431	N/A	INTRINSIC
low complexity region	496	513	N/A	INTRINSIC
SCOP:d1zbdb_	540	636	7e-8	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000127664

SMART Domains

Protein: ENSMUSP00000118564
Gene: ENSMUSG00000092329

Domain	Start	End	E-Value	Type
Pfam:Glycos_transf_2	104	287	7.4e-31	PFAM
Pfam:Glyco_transf_7C	261	331	4.9e-8	PFAM
RICIN	406	531	9.28e-27	SMART

Predicted Effect

probably damaging
Transcript: ENSMUST00000212404
AA Change: I33N

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)

Meta Mutation Damage Score

0.6089

Coding Region Coverage

1x: 99.3%
3x: 98.6%
10x: 96.9%
20x: 94.7%

Validation Efficiency

100% (71/71)

Allele List at MGI

Other mutations in this stock

Total: 72 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abhd4	C	T	14: 54,500,706 (GRCm39)	T165I	possibly damaging	Het
Acsl5	A	G	19: 55,277,343 (GRCm39)		probably benign	Het
Actl6b	C	A	5: 137,565,046 (GRCm39)		probably benign	Het
Atg13	T	C	2: 91,509,063 (GRCm39)		probably benign	Het
Cabyr	A	G	18: 12,883,909 (GRCm39)	E132G	probably damaging	Het
Cadps2	C	T	6: 23,583,411 (GRCm39)	V389I	probably damaging	Het
Capn2	C	T	1: 182,298,325 (GRCm39)	V647I	probably benign	Het
Card10	G	T	15: 78,671,601 (GRCm39)	P621Q	possibly damaging	Het
Catsperb	C	G	12: 101,569,033 (GRCm39)	H902D	possibly damaging	Het
Cers3	A	G	7: 66,435,805 (GRCm39)	M255V	possibly damaging	Het
Cfh	T	C	1: 140,030,071 (GRCm39)		probably null	Het
Chd3	A	C	11: 69,252,495 (GRCm39)		probably null	Het
Chpf2	G	T	5: 24,795,425 (GRCm39)	R316L	probably damaging	Het
Clca3a1	T	A	3: 144,713,550 (GRCm39)	N694Y	probably damaging	Het
Cplane1	A	G	15: 8,289,277 (GRCm39)	D2909G	unknown	Het
Ctbp2	G	A	7: 132,616,534 (GRCm39)	L44F	probably damaging	Het
Cttnbp2	T	C	6: 18,381,102 (GRCm39)	M1365V	probably benign	Het
D130052B06Rik	G	A	11: 33,573,922 (GRCm39)	R173H	probably benign	Het
Dchs1	A	G	7: 105,421,203 (GRCm39)	F406L	probably damaging	Het
Ddx43	T	A	9: 78,321,145 (GRCm39)	N384K	possibly damaging	Het
Drd5	G	A	5: 38,477,270 (GRCm39)	V88M	probably damaging	Het
Eefsec	A	T	6: 88,274,881 (GRCm39)	F361Y	probably benign	Het
Epb41	T	C	4: 131,717,215 (GRCm39)	D313G	probably damaging	Het
Etl4	T	C	2: 20,748,580 (GRCm39)	M104T	probably damaging	Het
Fabp7	A	T	10: 57,661,637 (GRCm39)	T37S	probably benign	Het
Fam186b	T	C	15: 99,184,834 (GRCm39)	T30A	probably benign	Het
Fam83d	G	A	2: 158,627,611 (GRCm39)	W433*	probably null	Het
Fmnl2	A	T	2: 52,944,503 (GRCm39)	T161S	probably benign	Het
Ghsr	C	T	3: 27,426,165 (GRCm39)	R74C	probably damaging	Het
Gtf3c3	C	T	1: 54,456,937 (GRCm39)	A488T	probably damaging	Het
Gtpbp4	A	T	13: 9,040,722 (GRCm39)		probably benign	Het
Hamp2	A	G	7: 30,623,511 (GRCm39)	L17P	possibly damaging	Het
Heatr1	C	A	13: 12,445,121 (GRCm39)	S1581R	probably damaging	Het
Hpf1	T	C	8: 61,353,147 (GRCm39)	V176A	probably benign	Het
Hydin	T	A	8: 111,240,735 (GRCm39)		probably null	Het
Ighg2c	G	A	12: 113,252,382 (GRCm39)	Q57*	probably null	Het
Itgb4	A	G	11: 115,870,594 (GRCm39)	N141S	possibly damaging	Het
Kif13b	G	T	14: 64,988,977 (GRCm39)	R786L	probably damaging	Het
Lhx3	C	A	2: 26,091,136 (GRCm39)	W391L	probably damaging	Het
Map1s	T	A	8: 71,365,551 (GRCm39)	V152D	probably damaging	Het
Map4	T	C	9: 109,865,834 (GRCm39)	M608T	probably benign	Het
Mb21d2	G	A	16: 28,748,324 (GRCm39)	A31V	probably benign	Het
Mfn1	T	C	3: 32,615,621 (GRCm39)	I328T	probably damaging	Het
Mif-ps9	G	A	19: 56,743,675 (GRCm39)		noncoding transcript	Het
Myh4	A	T	11: 67,141,157 (GRCm39)	I740F	possibly damaging	Het
Neo1	A	G	9: 58,893,069 (GRCm39)	V191A	probably benign	Het
Nfatc4	T	C	14: 56,067,485 (GRCm39)	V565A	probably damaging	Het
Nrxn2	G	C	19: 6,523,563 (GRCm39)	E525D	probably damaging	Het
Or12k8	T	C	2: 36,975,346 (GRCm39)	H138R	probably benign	Het
Pcdhb12	A	T	18: 37,570,261 (GRCm39)	D469V	probably damaging	Het
Pcdhb6	G	T	18: 37,468,167 (GRCm39)	V363L	probably benign	Het
Pkd1l2	T	C	8: 117,808,957 (GRCm39)	T78A	probably benign	Het
Primpol	T	G	8: 47,034,674 (GRCm39)	D418A	probably damaging	Het
Rbm12b1	G	A	4: 12,146,248 (GRCm39)	S740N	probably benign	Het
Rpe65	T	C	3: 159,305,986 (GRCm39)	L15P	probably damaging	Het
Rxrb	CGCGGCGGCGGCGGCGGCGGC	CGCGGCGGCGGCGGCGGC	17: 34,251,106 (GRCm39)		probably benign	Het
Sectm1a	A	G	11: 120,959,928 (GRCm39)		probably benign	Het
Sft2d1	C	A	17: 8,545,782 (GRCm39)		probably benign	Het
Slc22a18	A	G	7: 143,045,598 (GRCm39)		probably benign	Het
Slu7	G	A	11: 43,332,405 (GRCm39)		probably null	Het
Smc4	T	C	3: 68,931,622 (GRCm39)	V572A	probably damaging	Het
Tbck	T	A	3: 132,458,403 (GRCm39)	C678S	probably damaging	Het
Tnrc6b	T	C	15: 80,797,539 (GRCm39)	V1362A	probably damaging	Het
Ttn	T	C	2: 76,570,326 (GRCm39)	K25110E	possibly damaging	Het
Ugt2b35	A	G	5: 87,148,793 (GRCm39)	S15G	possibly damaging	Het
Upf3a	T	A	8: 13,842,184 (GRCm39)	I200K	probably damaging	Het
Vill	G	C	9: 118,899,701 (GRCm39)	G295A	possibly damaging	Het
Vmn1r191	A	T	13: 22,363,217 (GRCm39)	V179D	probably damaging	Het
Vmn2r74	T	C	7: 85,601,629 (GRCm39)	T670A	probably damaging	Het
Zfp169	T	C	13: 48,643,166 (GRCm39)	T654A	possibly damaging	Het
Zfp646	A	G	7: 127,481,138 (GRCm39)	E1105G	probably damaging	Het
Zyg11b	A	T	4: 108,117,239 (GRCm39)	Y334N	probably damaging	Het

Other mutations in Spire2

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00091:Spire2	APN	8	124,080,798 (GRCm39)	missense	probably damaging	1.00
IGL01610:Spire2	APN	8	124,083,502 (GRCm39)	missense	probably damaging	1.00
IGL01611:Spire2	APN	8	124,086,137 (GRCm39)	missense	probably damaging	1.00
IGL01776:Spire2	APN	8	124,086,131 (GRCm39)	missense	probably damaging	0.98
IGL02164:Spire2	APN	8	124,059,703 (GRCm39)	missense	probably damaging	0.99
IGL03005:Spire2	APN	8	124,090,107 (GRCm39)	missense	probably benign	0.16
R0127:Spire2	UTSW	8	124,084,836 (GRCm39)	splice site	probably benign
R0194:Spire2	UTSW	8	124,089,750 (GRCm39)	splice site	probably benign
R1386:Spire2	UTSW	8	124,088,105 (GRCm39)	critical splice donor site	probably null
R1526:Spire2	UTSW	8	124,095,502 (GRCm39)	missense	probably benign	0.08
R1538:Spire2	UTSW	8	124,084,895 (GRCm39)	missense	probably damaging	1.00
R1917:Spire2	UTSW	8	124,089,810 (GRCm39)	missense	probably benign	0.00
R1919:Spire2	UTSW	8	124,089,810 (GRCm39)	missense	probably benign	0.00
R2018:Spire2	UTSW	8	124,059,657 (GRCm39)	missense	probably damaging	1.00
R2019:Spire2	UTSW	8	124,059,657 (GRCm39)	missense	probably damaging	1.00
R4524:Spire2	UTSW	8	124,086,974 (GRCm39)	missense	probably benign
R4672:Spire2	UTSW	8	124,084,850 (GRCm39)	missense	probably benign	0.06
R4931:Spire2	UTSW	8	124,095,523 (GRCm39)	missense	possibly damaging	0.54
R4973:Spire2	UTSW	8	124,083,583 (GRCm39)	missense	probably damaging	1.00
R5057:Spire2	UTSW	8	124,084,940 (GRCm39)	missense	probably damaging	1.00
R5702:Spire2	UTSW	8	124,073,402 (GRCm39)	missense	probably benign	0.07
R5899:Spire2	UTSW	8	124,080,833 (GRCm39)	missense	probably damaging	1.00
R6747:Spire2	UTSW	8	124,083,585 (GRCm39)	missense	probably damaging	1.00
R6816:Spire2	UTSW	8	124,086,152 (GRCm39)	missense	probably benign	0.12
R6823:Spire2	UTSW	8	124,083,466 (GRCm39)	missense	probably damaging	1.00
R7146:Spire2	UTSW	8	124,095,989 (GRCm39)	missense	probably benign	0.08
R7851:Spire2	UTSW	8	124,083,438 (GRCm39)	splice site	probably null
R7903:Spire2	UTSW	8	124,095,489 (GRCm39)	missense	probably benign
R7923:Spire2	UTSW	8	124,059,726 (GRCm39)	missense	probably benign	0.00
R8181:Spire2	UTSW	8	124,088,042 (GRCm39)	missense	probably damaging	0.99
R8673:Spire2	UTSW	8	124,086,867 (GRCm39)	missense	probably damaging	1.00
R9057:Spire2	UTSW	8	124,095,547 (GRCm39)	unclassified	probably benign
R9404:Spire2	UTSW	8	124,090,077 (GRCm39)	nonsense	probably null

Predicted Primers

PCR Primer
(F):5'- ACGATGATTCCCCTGTGGCAAAG -3'
(R):5'- CGAAGCTCCAGTGTCTCCACAAAG -3'

Sequencing Primer
(F):5'- CTGTGGCAAAGCTATGCTGAG -3'
(R):5'- AGTGTCTCCACAAAGAGAGC -3'

Posted On

2013-06-11