Incidental Mutation 'IGL00595:Kcnc2'
ID4661
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Kcnc2
Ensembl Gene ENSMUSG00000035681
Gene Namepotassium voltage gated channel, Shaw-related subfamily, member 2
SynonymsKv3.2, KShIIIA
Accession Numbers
Is this an essential gene? Non essential (E-score: 0.000) question?
Stock #IGL00595
Quality Score
Status
Chromosome10
Chromosomal Location112271121-112467024 bp(+) (GRCm38)
Type of Mutationmissense
DNA Base Change (assembly) A to T at 112461988 bp
ZygosityHeterozygous
Amino Acid Change Serine to Cysteine at position 606 (S606C)
Ref Sequence ENSEMBL: ENSMUSP00000151579 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000092175] [ENSMUST00000218445] [ENSMUST00000218827] [ENSMUST00000219301] [ENSMUST00000219607]
Predicted Effect probably benign
Transcript: ENSMUST00000092175
SMART Domains Protein: ENSMUSP00000089814
Gene: ENSMUSG00000035681

DomainStartEndE-ValueType
BTB 8 163 2.53e-17 SMART
Pfam:Ion_trans 232 488 1e-46 PFAM
Pfam:Ion_trans_2 388 481 5.8e-13 PFAM
low complexity region 552 568 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000218445
Predicted Effect probably benign
Transcript: ENSMUST00000218827
Predicted Effect probably damaging
Transcript: ENSMUST00000219301
AA Change: S606C

PolyPhen 2 Score 0.987 (Sensitivity: 0.73; Specificity: 0.96)
Predicted Effect probably benign
Transcript: ENSMUST00000219607
Coding Region Coverage
Validation Efficiency
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The Shaker gene family of Drosophila encodes components of voltage-gated potassium channels and is comprised of four subfamilies. Based on sequence similarity, this gene is similar to one of these subfamilies, namely the Shaw subfamily. The protein encoded by this gene belongs to the delayed rectifier class of channel proteins and is an integral membrane protein that mediates the voltage-dependent potassium ion permeability of excitable membranes. Several transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, May 2012]
PHENOTYPE: Mice homozygous for a knock-out allele display impaired fast spiking in cortical interneurons, distorted cortical rhythmic activity, enhanced susceptibility to seizures, increased anxiety in the open field, and abnormal sleep patterns. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 29 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
2310057J18Rik G A 10: 28,973,958 R161* probably null Het
2610002M06Rik A G X: 107,787,844 S189P probably damaging Het
Adam20 T A 8: 40,796,047 F398Y probably benign Het
Ano1 T A 7: 144,638,513 I374F probably damaging Het
Apol10a A T 15: 77,484,935 N45Y probably null Het
Asnsd1 A G 1: 53,347,488 S327P probably damaging Het
Ccdc83 T A 7: 90,244,044 K168N probably damaging Het
Dpysl4 G T 7: 139,096,176 V274F probably damaging Het
Fxr2 T G 11: 69,649,192 S292A probably benign Het
Gm15130 T A 2: 111,138,977 D132V unknown Het
Gpr161 A G 1: 165,318,803 H436R probably benign Het
Jaml C T 9: 45,100,989 probably benign Het
Kcnrg T C 14: 61,607,910 I133T probably damaging Het
Kdm7a A G 6: 39,144,510 I837T probably benign Het
Lactb2 A G 1: 13,630,126 L227S probably benign Het
Lats1 T G 10: 7,702,305 S398A probably benign Het
Llgl2 T A 11: 115,834,884 D19E probably benign Het
Nup107 A T 10: 117,773,352 C365* probably null Het
Nup107 T C 10: 117,773,368 probably null Het
Plekhf2 T C 4: 10,991,022 K107E probably damaging Het
Rnf139 A T 15: 58,898,542 I139F possibly damaging Het
Rsbn1 A G 3: 103,928,690 N348S probably benign Het
Rttn A T 18: 88,974,340 Q136H probably benign Het
Syne2 C T 12: 75,925,646 T1052I possibly damaging Het
Tom1l1 A T 11: 90,674,740 L101Q probably damaging Het
Tubal3 A G 13: 3,933,015 N265S probably damaging Het
Zfp141 T C 7: 42,476,655 N131S probably benign Het
Zfp944 T C 17: 22,339,205 S354G probably benign Het
Zfp961 G A 8: 71,968,428 A262T probably damaging Het
Other mutations in Kcnc2
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00595:Kcnc2 APN 10 112461987 missense probably benign 0.04
IGL01646:Kcnc2 APN 10 112272406 critical splice donor site probably null
IGL01950:Kcnc2 APN 10 112462075 intron probably benign
IGL02036:Kcnc2 APN 10 112455926 missense possibly damaging 0.94
IGL02164:Kcnc2 APN 10 112455685 missense possibly damaging 0.92
IGL02447:Kcnc2 APN 10 112455946 missense probably damaging 1.00
IGL03087:Kcnc2 APN 10 112455747 missense probably benign 0.19
IGL03385:Kcnc2 APN 10 112455786 missense probably damaging 1.00
R0133:Kcnc2 UTSW 10 112458597 missense probably damaging 1.00
R1444:Kcnc2 UTSW 10 112455601 unclassified probably benign
R1474:Kcnc2 UTSW 10 112456400 missense probably damaging 1.00
R2221:Kcnc2 UTSW 10 112456526 missense probably damaging 1.00
R4504:Kcnc2 UTSW 10 112455794 missense probably damaging 1.00
R4714:Kcnc2 UTSW 10 112455828 missense possibly damaging 0.82
R4935:Kcnc2 UTSW 10 112272228 missense probably benign 0.00
R6168:Kcnc2 UTSW 10 112455756 missense probably benign 0.13
R6338:Kcnc2 UTSW 10 112271856 missense probably benign 0.04
R6375:Kcnc2 UTSW 10 112463189 missense possibly damaging 0.92
R6511:Kcnc2 UTSW 10 112462067 intron probably benign
R6516:Kcnc2 UTSW 10 112462000 missense probably benign 0.00
R6556:Kcnc2 UTSW 10 112271856 missense probably benign 0.04
R6609:Kcnc2 UTSW 10 112271856 missense probably benign 0.04
R6610:Kcnc2 UTSW 10 112271856 missense probably benign 0.04
R6612:Kcnc2 UTSW 10 112271856 missense probably benign 0.04
R6837:Kcnc2 UTSW 10 112458502 missense probably damaging 0.96
R7151:Kcnc2 UTSW 10 112458509 missense possibly damaging 0.46
R7715:Kcnc2 UTSW 10 112271940 nonsense probably null
Z1177:Kcnc2 UTSW 10 112272306 missense probably damaging 0.99
Posted On2012-04-20