Incidental Mutation 'R5970:Snx31'
ID 470822
Institutional Source Beutler Lab
Gene Symbol Snx31
Ensembl Gene ENSMUSG00000013611
Gene Name sorting nexin 31
Synonyms 4631426E05Rik
MMRRC Submission 044153-MU
Accession Numbers
Essential gene? Non essential (E-score: 0.000) question?
Stock # R5970 (G1)
Quality Score 225
Status Validated
Chromosome 15
Chromosomal Location 36504208-36555718 bp(-) (GRCm39)
Type of Mutation nonsense
DNA Base Change (assembly) A to T at 36523634 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Tyrosine to Stop codon at position 349 (Y349*)
Ref Sequence ENSEMBL: ENSMUSP00000124063 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000013755] [ENSMUST00000161202]
AlphaFold Q6P8Y7
Predicted Effect probably null
Transcript: ENSMUST00000013755
AA Change: Y349*
SMART Domains Protein: ENSMUSP00000013755
Gene: ENSMUSG00000013611
AA Change: Y349*

DomainStartEndE-ValueType
PX 1 105 5.44e-9 SMART
PDB:4GXB|A 112 382 1e-64 PDB
Blast:B41 115 324 1e-49 BLAST
Predicted Effect probably null
Transcript: ENSMUST00000161202
AA Change: Y349*
SMART Domains Protein: ENSMUSP00000124063
Gene: ENSMUSG00000013611
AA Change: Y349*

DomainStartEndE-ValueType
PX 1 105 5.44e-9 SMART
PDB:4GXB|A 112 382 1e-64 PDB
Blast:B41 115 324 1e-49 BLAST
Meta Mutation Damage Score 0.9755 question?
Coding Region Coverage
  • 1x: 99.9%
  • 3x: 99.6%
  • 10x: 98.1%
  • 20x: 94.4%
Validation Efficiency 98% (63/64)
Allele List at MGI
Other mutations in this stock
Total: 52 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Aldh1l1 G A 6: 90,574,028 (GRCm39) probably benign Het
Ambn T C 5: 88,615,810 (GRCm39) V413A possibly damaging Het
Amotl1 T A 9: 14,507,824 (GRCm39) D41V probably damaging Het
Arhgef26 T C 3: 62,247,468 (GRCm39) V184A probably benign Het
Birc6 G T 17: 74,925,497 (GRCm39) G936V possibly damaging Het
Ccser1 T A 6: 61,288,226 (GRCm39) S130T possibly damaging Het
Cecr2 A G 6: 120,697,868 (GRCm39) I56V probably damaging Het
Cfap52 A G 11: 67,821,570 (GRCm39) I486T probably damaging Het
Col4a3 A G 1: 82,694,050 (GRCm39) I1557V possibly damaging Het
Col6a5 T A 9: 105,823,046 (GRCm39) I104F unknown Het
Cry2 A G 2: 92,243,312 (GRCm39) S510P probably benign Het
Csmd2 G C 4: 128,439,944 (GRCm39) A3133P probably benign Het
Cyld G T 8: 89,459,621 (GRCm39) A611S probably damaging Het
Dennd4c G A 4: 86,743,749 (GRCm39) G1197E probably damaging Het
Dnah10 T C 5: 124,885,793 (GRCm39) F2969L probably benign Het
Dnai1 A G 4: 41,625,281 (GRCm39) K415R probably benign Het
Dnmbp T A 19: 43,842,610 (GRCm39) T1253S probably benign Het
Dsp T C 13: 38,379,678 (GRCm39) L1542P possibly damaging Het
Duox1 T A 2: 122,170,682 (GRCm39) L1234Q probably damaging Het
Efr3b T A 12: 4,018,590 (GRCm39) R585S possibly damaging Het
Gpt A G 15: 76,583,552 (GRCm39) probably null Het
Heatr6 G A 11: 83,644,544 (GRCm39) probably benign Het
Kcns2 A G 15: 34,839,930 (GRCm39) D431G probably benign Het
Kdm3b A G 18: 34,962,342 (GRCm39) N1543D probably damaging Het
Man2a1 A G 17: 64,932,375 (GRCm39) K154R probably benign Het
Mical3 G A 6: 120,935,232 (GRCm39) Q893* probably null Het
Morc3 C T 16: 93,663,341 (GRCm39) H515Y possibly damaging Het
Mprip A T 11: 59,648,547 (GRCm39) R750S probably damaging Het
Mroh1 G A 15: 76,335,691 (GRCm39) V1436M probably benign Het
Muc5ac C T 7: 141,344,406 (GRCm39) R69* probably null Het
Muc5b A T 7: 141,410,449 (GRCm39) Y1274F unknown Het
Mybpc1 A G 10: 88,378,318 (GRCm39) L674P probably damaging Het
Mypn A G 10: 62,966,802 (GRCm39) V958A probably benign Het
Nipbl T C 15: 8,326,302 (GRCm39) T2436A probably benign Het
Or7g20 A G 9: 18,946,443 (GRCm39) D8G probably benign Het
Pcdhb5 T A 18: 37,454,826 (GRCm39) L402Q probably damaging Het
Pigp T A 16: 94,171,053 (GRCm39) probably null Het
Rp1 A G 1: 4,418,685 (GRCm39) L809P probably benign Het
Scn3a T A 2: 65,325,125 (GRCm39) probably benign Het
Sdf2 A T 11: 78,136,906 (GRCm39) M29L probably benign Het
Serpina3b T G 12: 104,100,350 (GRCm39) L311V possibly damaging Het
Spidr A C 16: 15,932,733 (GRCm39) C182W probably damaging Het
St13 A T 15: 81,261,999 (GRCm39) S146R probably damaging Het
St8sia4 A G 1: 95,581,307 (GRCm39) V145A probably damaging Het
Stradb T C 1: 59,019,175 (GRCm39) probably null Het
Tcp11l2 T A 10: 84,430,661 (GRCm39) probably benign Het
Tfdp2 C T 9: 96,199,627 (GRCm39) P74S unknown Het
Tmprss15 C T 16: 78,854,547 (GRCm39) R287H probably benign Het
Trav10d T C 14: 53,048,779 (GRCm39) Y57H probably damaging Het
Vmn2r104 A G 17: 20,249,733 (GRCm39) I846T probably benign Het
Ywhah T A 5: 33,184,292 (GRCm39) M165K possibly damaging Het
Zfp324 C A 7: 12,703,293 (GRCm39) P72T probably benign Het
Other mutations in Snx31
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00094:Snx31 APN 15 36,545,761 (GRCm39) critical splice acceptor site probably null
IGL01627:Snx31 APN 15 36,517,818 (GRCm39) missense probably damaging 1.00
IGL02514:Snx31 APN 15 36,525,728 (GRCm39) missense probably damaging 1.00
IGL03069:Snx31 APN 15 36,525,749 (GRCm39) nonsense probably null
IGL03182:Snx31 APN 15 36,525,833 (GRCm39) missense probably benign 0.00
R0755:Snx31 UTSW 15 36,534,576 (GRCm39) missense probably damaging 0.99
R1005:Snx31 UTSW 15 36,517,837 (GRCm39) splice site probably benign
R1463:Snx31 UTSW 15 36,539,444 (GRCm39) missense probably null 1.00
R1513:Snx31 UTSW 15 36,545,745 (GRCm39) missense probably damaging 0.99
R2030:Snx31 UTSW 15 36,525,848 (GRCm39) missense probably benign 0.31
R3404:Snx31 UTSW 15 36,525,799 (GRCm39) missense probably benign 0.00
R3720:Snx31 UTSW 15 36,523,704 (GRCm39) critical splice acceptor site probably null
R4152:Snx31 UTSW 15 36,525,785 (GRCm39) missense probably benign
R4474:Snx31 UTSW 15 36,546,256 (GRCm39) intron probably benign
R4729:Snx31 UTSW 15 36,523,698 (GRCm39) missense possibly damaging 0.92
R4998:Snx31 UTSW 15 36,539,513 (GRCm39) missense probably damaging 0.96
R5010:Snx31 UTSW 15 36,555,469 (GRCm39) missense probably damaging 1.00
R5375:Snx31 UTSW 15 36,525,730 (GRCm39) missense probably damaging 0.99
R5893:Snx31 UTSW 15 36,523,601 (GRCm39) missense probably damaging 0.98
R6211:Snx31 UTSW 15 36,547,030 (GRCm39) missense probably damaging 0.98
R7198:Snx31 UTSW 15 36,555,455 (GRCm39) missense probably benign 0.04
R7293:Snx31 UTSW 15 36,523,596 (GRCm39) missense probably damaging 0.97
R7329:Snx31 UTSW 15 36,555,621 (GRCm39) missense probably benign 0.00
R7741:Snx31 UTSW 15 36,523,587 (GRCm39) critical splice donor site probably null
R8057:Snx31 UTSW 15 36,523,606 (GRCm39) missense probably damaging 0.98
R8791:Snx31 UTSW 15 36,537,678 (GRCm39) missense probably benign 0.01
R8806:Snx31 UTSW 15 36,537,698 (GRCm39) missense probably damaging 1.00
R9349:Snx31 UTSW 15 36,555,430 (GRCm39) missense probably damaging 1.00
R9655:Snx31 UTSW 15 36,534,582 (GRCm39) missense probably damaging 1.00
Predicted Primers PCR Primer
(F):5'- ATTTCAGTCCCGTGCCAGTG -3'
(R):5'- AACTTTGCCCCTCTGGATGG -3'

Sequencing Primer
(F):5'- TCCCGTGCCAGTGAAGGAC -3'
(R):5'- TGCTGAGTTACTGCCACG -3'
Posted On 2017-03-31