Mutagenetix > Incidental Mutation

Incidental Mutation 'R5975:Ntsr1'

471667

Institutional Source

Beutler Lab

Gene Symbol

Ntsr1

Ensembl Gene

ENSMUSG00000027568

Gene Name

neurotensin receptor 1

Synonyms

Ntsr1, NTR1, NTR-1, NT-1R

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.071) question?

Stock #

R5975 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

180499976-180544980 bp(+) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

T to A at 180500788 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Leucine to Glutamine at position 124 (L124Q)

Ref Sequence

ENSEMBL: ENSMUSP00000127548 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000029084] [ENSMUST00000170448]

AlphaFold

O88319

Predicted Effect

probably damaging
Transcript: ENSMUST00000029084
AA Change: L124Q

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000029084
Gene: ENSMUSG00000027568
AA Change: L124Q

Domain	Start	End	E-Value	Type
low complexity region	31	49	N/A	INTRINSIC
Pfam:7tm_1	80	369	7.5e-55	PFAM
Pfam:7TM_GPCR_Srv	82	386	1e-8	PFAM
low complexity region	392	398	N/A	INTRINSIC

Predicted Effect

probably damaging
Transcript: ENSMUST00000170448
AA Change: L124Q

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000127548
Gene: ENSMUSG00000027568
AA Change: L124Q

Domain	Start	End	E-Value	Type
low complexity region	31	49	N/A	INTRINSIC
Pfam:7tm_4	70	283	6.7e-9	PFAM
Pfam:7tm_1	80	369	2e-51	PFAM
Pfam:7TM_GPCR_Srv	83	386	1.8e-8	PFAM
low complexity region	392	398	N/A	INTRINSIC

Meta Mutation Damage Score

0.8999

Coding Region Coverage

1x: 99.9%
3x: 99.5%
10x: 97.8%
20x: 93.3%

Validation Efficiency

98% (80/82)

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] Neurotensin receptor 1 belongs to the large superfamily of G-protein coupled receptors. NTSR1 mediates the multiple functions of neurotensin, such as hypotension, hyperglycemia, hypothermia, antinociception, and regulation of intestinal motility and secretion. [provided by RefSeq, Jul 2008]
PHENOTYPE: Mice deficient for this marker have normal baseline prepulse inhibition responses and acoustic startle responses. Mice are heavier, eat more, and have lower body temperatures. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 71 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
4932438A13Rik	C	T	3: 36,969,221	T2233I	possibly damaging	Het
9430038I01Rik	T	C	7: 137,387,292		probably benign	Het
Abhd14a	A	T	9: 106,443,951		probably null	Het
Actn2	T	C	13: 12,340,497	N2D	probably benign	Het
Adcy9	T	C	16: 4,311,567	E722G	probably damaging	Het
Alox12	C	A	11: 70,242,783	V572L	possibly damaging	Het
Ankrd11	T	C	8: 122,889,749	I2434V	possibly damaging	Het
Anks1	T	A	17: 27,991,447		probably null	Het
Bpifa3	T	A	2: 154,136,321	S148T	probably damaging	Het
Bptf	C	T	11: 107,035,864		probably benign	Het
Cabin1	A	T	10: 75,657,839	L1655H	probably damaging	Het
Ccdc13	G	T	9: 121,827,235	Q171K	probably benign	Het
Ccdc33	T	A	9: 58,117,478	Q155L	possibly damaging	Het
Cckbr	G	A	7: 105,470,619	G280E	probably benign	Het
Cdk11b	G	A	4: 155,648,240		probably benign	Het
Celsr1	G	T	15: 85,919,038		probably null	Het
Cenpj	A	T	14: 56,564,066	I150N	possibly damaging	Het
Cep135	C	A	5: 76,640,890	A1110E	possibly damaging	Het
Chit1	C	A	1: 134,146,626	H224N	probably damaging	Het
Cul5	T	C	9: 53,622,793	R680G	probably damaging	Het
Dhx58	C	A	11: 100,702,209	R224L	probably damaging	Het
Dlx1	C	A	2: 71,531,009	N122K	probably damaging	Het
Dnah5	A	C	15: 28,234,282	D279A	probably damaging	Het
Enpp3	A	G	10: 24,774,842	W799R	probably benign	Het
Ercc5	A	G	1: 44,173,406	T675A	probably benign	Het
Farsa	T	A	8: 84,864,432		probably null	Het
Fbxw15	A	T	9: 109,555,252	V397D	probably damaging	Het
Fcrl5	G	A	3: 87,442,103	V62I	probably benign	Het
Gart	A	G	16: 91,624,336	S815P	probably damaging	Het
Glrx5	A	G	12: 105,040,323	N111S	possibly damaging	Het
Gm10845	A	G	14: 79,863,174		noncoding transcript	Het
Gm11639	A	G	11: 104,687,549		probably benign	Het
Gm8882	A	G	6: 132,362,073	S61P	unknown	Het
Gm9925	T	A	18: 74,065,516		probably benign	Het
Gsdme	T	C	6: 50,227,359	N206S	probably benign	Het
Helz2	T	C	2: 181,231,050	S2459G	probably benign	Het
Hnrnpul1	A	G	7: 25,754,359	S93P	possibly damaging	Het
Ints2	A	T	11: 86,226,748	I716N	possibly damaging	Het
Lmnb2	G	A	10: 80,905,128	Q248*	probably null	Het
Map3k7cl	A	G	16: 87,570,321	I32V	probably benign	Het
Mfsd4b4	A	T	10: 39,892,470	I255N	probably benign	Het
Myh6	A	G	14: 54,950,508	I1163T	probably benign	Het
Nphs1	A	T	7: 30,466,115	T636S	possibly damaging	Het
Obscn	C	T	11: 59,122,619		probably null	Het
P4ha2	G	A	11: 54,126,412		probably null	Het
Pcdha9	T	A	18: 36,999,111	V411D	probably benign	Het
Pkhd1l1	A	T	15: 44,525,988	I1380F	probably damaging	Het
Plekha1	T	C	7: 130,892,253	V106A	probably benign	Het
Plekhm1	A	T	11: 103,376,691	V818E	possibly damaging	Het
Pprc1	T	G	19: 46,065,370		probably benign	Het
Prmt9	T	C	8: 77,561,018		probably benign	Het
Rab26	T	C	17: 24,530,399	N193D	possibly damaging	Het
Rnf111	A	G	9: 70,429,580	S942P	probably damaging	Het
Scgb2b18	T	C	7: 33,173,225	T52A	probably damaging	Het
Syt3	C	T	7: 44,392,763	Q349*	probably null	Het
Tas2r107	T	C	6: 131,659,780	N102S	probably benign	Het
Tas2r126	T	A	6: 42,435,000	Y156N	possibly damaging	Het
Tcaf2	A	T	6: 42,642,778	I105N	probably benign	Het
Tet1	A	C	10: 62,879,773	M81R	probably benign	Het
Togaram2	T	C	17: 71,729,205	Y897H	probably damaging	Het
Trerf1	A	T	17: 47,314,271		noncoding transcript	Het
Ttn	G	A	2: 76,761,235	T12703I	probably damaging	Het
Unc79	A	G	12: 103,125,626	K1735E	possibly damaging	Het
Usp54	G	A	14: 20,583,351	T372I	possibly damaging	Het
Wdr24	T	C	17: 25,827,128	S476P	probably benign	Het
Wdr78	G	A	4: 103,049,589	P676S	probably benign	Het
Zbtb1	T	C	12: 76,386,275	I345T	possibly damaging	Het
Zcrb1	T	A	15: 93,395,615	I29L	probably benign	Het
Zfp341	T	A	2: 154,630,441	C315S	probably damaging	Het
Zfp623	C	A	15: 75,948,163	R323S	probably benign	Het
Zfp831	T	A	2: 174,644,092	Y187N	possibly damaging	Het

Other mutations in Ntsr1

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01088:Ntsr1	APN	2	180542542	missense	probably damaging	0.99
IGL01765:Ntsr1	APN	2	180538717	missense	possibly damaging	0.56
IGL02137:Ntsr1	APN	2	180538835	critical splice donor site	probably null
IGL02321:Ntsr1	APN	2	180538834	critical splice donor site	probably null
IGL03349:Ntsr1	APN	2	180500502	missense	probably benign
R0482:Ntsr1	UTSW	2	180501056	missense	possibly damaging	0.54
R0542:Ntsr1	UTSW	2	180542581	missense	probably damaging	1.00
R1081:Ntsr1	UTSW	2	180538756	missense	probably benign	0.14
R1241:Ntsr1	UTSW	2	180500601	missense	probably damaging	1.00
R1540:Ntsr1	UTSW	2	180542647	missense	probably damaging	0.99
R3718:Ntsr1	UTSW	2	180542706	missense	probably benign	0.00
R4206:Ntsr1	UTSW	2	180500752	missense	probably damaging	1.00
R5481:Ntsr1	UTSW	2	180541520	missense	possibly damaging	0.79
R5703:Ntsr1	UTSW	2	180500433	missense	probably damaging	0.98
R6643:Ntsr1	UTSW	2	180500926	missense	probably damaging	1.00
R6754:Ntsr1	UTSW	2	180542683	missense	probably benign	0.00
R7295:Ntsr1	UTSW	2	180500932	missense	probably damaging	1.00
R7316:Ntsr1	UTSW	2	180500752	missense	probably damaging	1.00
R7765:Ntsr1	UTSW	2	180538817	missense	probably damaging	0.99
R7822:Ntsr1	UTSW	2	180538690	missense	probably damaging	1.00
R8087:Ntsr1	UTSW	2	180500172	unclassified	probably benign
R8555:Ntsr1	UTSW	2	180538677	missense	probably benign	0.08
R9447:Ntsr1	UTSW	2	180538747	missense	probably benign	0.10
R9628:Ntsr1	UTSW	2	180541481	missense	probably damaging	1.00
R9629:Ntsr1	UTSW	2	180541481	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- ACCTGGACGTGAACACTGAC -3'
(R):5'- GCACTGATGAATTTCTTGGTGC -3'

Sequencing Primer
(F):5'- ATTCCAAGGTGCTGGTGACC -3'
(R):5'- ATGAATTTCTTGGTGCGGCTGC -3'

Posted On

2017-03-31