Incidental Mutation 'R5975:Dhx58'
ID 471707
Institutional Source Beutler Lab
Gene Symbol Dhx58
Ensembl Gene ENSMUSG00000017830
Gene Name DEXH (Asp-Glu-X-His) box polypeptide 58
Synonyms D11Lgp2e, B430001I08Rik, LPG2
Accession Numbers
Is this an essential gene? Probably non essential (E-score: 0.131) question?
Stock # R5975 (G1)
Quality Score 224
Status Validated
Chromosome 11
Chromosomal Location 100694884-100704271 bp(-) (GRCm38)
Type of Mutation missense
DNA Base Change (assembly) C to A at 100702209 bp (GRCm38)
Zygosity Heterozygous
Amino Acid Change Arginine to Leucine at position 224 (R224L)
Ref Sequence ENSEMBL: ENSMUSP00000017974 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000006973] [ENSMUST00000017974] [ENSMUST00000103118]
AlphaFold Q99J87
Predicted Effect probably benign
Transcript: ENSMUST00000006973
SMART Domains Protein: ENSMUSP00000006973
Gene: ENSMUSG00000020918

DomainStartEndE-ValueType
low complexity region 21 72 N/A INTRINSIC
Pfam:PCAF_N 81 332 1.2e-155 PFAM
low complexity region 398 417 N/A INTRINSIC
Pfam:Acetyltransf_7 538 621 5e-13 PFAM
Pfam:Acetyltransf_1 545 620 3.2e-11 PFAM
low complexity region 659 675 N/A INTRINSIC
BROMO 718 826 6.87e-38 SMART
Predicted Effect probably damaging
Transcript: ENSMUST00000017974
AA Change: R224L

PolyPhen 2 Score 0.975 (Sensitivity: 0.76; Specificity: 0.96)
SMART Domains Protein: ENSMUSP00000017974
Gene: ENSMUSG00000017830
AA Change: R224L

DomainStartEndE-ValueType
DEXDc 2 207 2.86e-22 SMART
HELICc 387 475 3.85e-14 SMART
Blast:HELICc 497 543 4e-12 BLAST
Pfam:RIG-I_C-RD 552 667 1.5e-37 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000103118
SMART Domains Protein: ENSMUSP00000099407
Gene: ENSMUSG00000020918

DomainStartEndE-ValueType
low complexity region 21 72 N/A INTRINSIC
Pfam:PCAF_N 81 331 4.4e-120 PFAM
low complexity region 398 417 N/A INTRINSIC
Pfam:Acetyltransf_7 539 622 1.2e-11 PFAM
Pfam:Acetyltransf_1 547 621 3.1e-11 PFAM
low complexity region 660 676 N/A INTRINSIC
BROMO 719 827 6.87e-38 SMART
Predicted Effect noncoding transcript
Transcript: ENSMUST00000126167
Predicted Effect noncoding transcript
Transcript: ENSMUST00000126299
Predicted Effect noncoding transcript
Transcript: ENSMUST00000132930
Predicted Effect noncoding transcript
Transcript: ENSMUST00000137154
Predicted Effect noncoding transcript
Transcript: ENSMUST00000149869
Predicted Effect noncoding transcript
Transcript: ENSMUST00000150656
Predicted Effect noncoding transcript
Transcript: ENSMUST00000153526
Meta Mutation Damage Score 0.6452 question?
Coding Region Coverage
  • 1x: 99.9%
  • 3x: 99.5%
  • 10x: 97.8%
  • 20x: 93.3%
Validation Efficiency 98% (80/82)
MGI Phenotype PHENOTYPE: Mice homozygous for a knock-out allele exhibit increased susceptibility to EMCV infection and decreased susceptibility to VSV infection. Mice homozygous for a different knock-out allele exhibit increased susceptibility to WNV infection. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 71 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
4932438A13Rik C T 3: 36,969,221 T2233I possibly damaging Het
9430038I01Rik T C 7: 137,387,292 probably benign Het
Abhd14a A T 9: 106,443,951 probably null Het
Actn2 T C 13: 12,340,497 N2D probably benign Het
Adcy9 T C 16: 4,311,567 E722G probably damaging Het
Alox12 C A 11: 70,242,783 V572L possibly damaging Het
Ankrd11 T C 8: 122,889,749 I2434V possibly damaging Het
Anks1 T A 17: 27,991,447 probably null Het
Bpifa3 T A 2: 154,136,321 S148T probably damaging Het
Bptf C T 11: 107,035,864 probably benign Het
Cabin1 A T 10: 75,657,839 L1655H probably damaging Het
Ccdc13 G T 9: 121,827,235 Q171K probably benign Het
Ccdc33 T A 9: 58,117,478 Q155L possibly damaging Het
Cckbr G A 7: 105,470,619 G280E probably benign Het
Cdk11b G A 4: 155,648,240 probably benign Het
Celsr1 G T 15: 85,919,038 probably null Het
Cenpj A T 14: 56,564,066 I150N possibly damaging Het
Cep135 C A 5: 76,640,890 A1110E possibly damaging Het
Chit1 C A 1: 134,146,626 H224N probably damaging Het
Cul5 T C 9: 53,622,793 R680G probably damaging Het
Dlx1 C A 2: 71,531,009 N122K probably damaging Het
Dnah5 A C 15: 28,234,282 D279A probably damaging Het
Enpp3 A G 10: 24,774,842 W799R probably benign Het
Ercc5 A G 1: 44,173,406 T675A probably benign Het
Farsa T A 8: 84,864,432 probably null Het
Fbxw15 A T 9: 109,555,252 V397D probably damaging Het
Fcrl5 G A 3: 87,442,103 V62I probably benign Het
Gart A G 16: 91,624,336 S815P probably damaging Het
Glrx5 A G 12: 105,040,323 N111S possibly damaging Het
Gm10845 A G 14: 79,863,174 noncoding transcript Het
Gm11639 A G 11: 104,687,549 probably benign Het
Gm8882 A G 6: 132,362,073 S61P unknown Het
Gm9925 T A 18: 74,065,516 probably benign Het
Gsdme T C 6: 50,227,359 N206S probably benign Het
Helz2 T C 2: 181,231,050 S2459G probably benign Het
Hnrnpul1 A G 7: 25,754,359 S93P possibly damaging Het
Ints2 A T 11: 86,226,748 I716N possibly damaging Het
Lmnb2 G A 10: 80,905,128 Q248* probably null Het
Map3k7cl A G 16: 87,570,321 I32V probably benign Het
Mfsd4b4 A T 10: 39,892,470 I255N probably benign Het
Myh6 A G 14: 54,950,508 I1163T probably benign Het
Nphs1 A T 7: 30,466,115 T636S possibly damaging Het
Ntsr1 T A 2: 180,500,788 L124Q probably damaging Het
Obscn C T 11: 59,122,619 probably null Het
P4ha2 G A 11: 54,126,412 probably null Het
Pcdha9 T A 18: 36,999,111 V411D probably benign Het
Pkhd1l1 A T 15: 44,525,988 I1380F probably damaging Het
Plekha1 T C 7: 130,892,253 V106A probably benign Het
Plekhm1 A T 11: 103,376,691 V818E possibly damaging Het
Pprc1 T G 19: 46,065,370 probably benign Het
Prmt9 T C 8: 77,561,018 probably benign Het
Rab26 T C 17: 24,530,399 N193D possibly damaging Het
Rnf111 A G 9: 70,429,580 S942P probably damaging Het
Scgb2b18 T C 7: 33,173,225 T52A probably damaging Het
Syt3 C T 7: 44,392,763 Q349* probably null Het
Tas2r107 T C 6: 131,659,780 N102S probably benign Het
Tas2r126 T A 6: 42,435,000 Y156N possibly damaging Het
Tcaf2 A T 6: 42,642,778 I105N probably benign Het
Tet1 A C 10: 62,879,773 M81R probably benign Het
Togaram2 T C 17: 71,729,205 Y897H probably damaging Het
Trerf1 A T 17: 47,314,271 noncoding transcript Het
Ttn G A 2: 76,761,235 T12703I probably damaging Het
Unc79 A G 12: 103,125,626 K1735E possibly damaging Het
Usp54 G A 14: 20,583,351 T372I possibly damaging Het
Wdr24 T C 17: 25,827,128 S476P probably benign Het
Wdr78 G A 4: 103,049,589 P676S probably benign Het
Zbtb1 T C 12: 76,386,275 I345T possibly damaging Het
Zcrb1 T A 15: 93,395,615 I29L probably benign Het
Zfp341 T A 2: 154,630,441 C315S probably damaging Het
Zfp623 C A 15: 75,948,163 R323S probably benign Het
Zfp831 T A 2: 174,644,092 Y187N possibly damaging Het
Other mutations in Dhx58
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01395:Dhx58 APN 11 100703926 missense probably damaging 0.97
IGL02476:Dhx58 APN 11 100702264 missense probably benign 0.00
R0103:Dhx58 UTSW 11 100695270 missense probably damaging 1.00
R0103:Dhx58 UTSW 11 100695270 missense probably damaging 1.00
R0137:Dhx58 UTSW 11 100696997 missense probably damaging 0.99
R0164:Dhx58 UTSW 11 100695324 missense probably benign 0.42
R0164:Dhx58 UTSW 11 100695324 missense probably benign 0.42
R0369:Dhx58 UTSW 11 100701548 critical splice donor site probably null
R0390:Dhx58 UTSW 11 100699264 missense probably damaging 1.00
R0606:Dhx58 UTSW 11 100702251 missense probably benign 0.00
R1710:Dhx58 UTSW 11 100703574 missense probably benign 0.20
R1816:Dhx58 UTSW 11 100703152 missense probably damaging 0.98
R1993:Dhx58 UTSW 11 100703490 splice site probably null
R2281:Dhx58 UTSW 11 100698154 critical splice donor site probably null
R3176:Dhx58 UTSW 11 100696979 missense probably damaging 1.00
R3276:Dhx58 UTSW 11 100696979 missense probably damaging 1.00
R4651:Dhx58 UTSW 11 100701359 missense probably damaging 1.00
R4652:Dhx58 UTSW 11 100701359 missense probably damaging 1.00
R4716:Dhx58 UTSW 11 100696971 splice site probably null
R5030:Dhx58 UTSW 11 100696137 missense probably damaging 1.00
R5082:Dhx58 UTSW 11 100696976 missense probably benign 0.29
R5098:Dhx58 UTSW 11 100695173 missense probably benign
R5394:Dhx58 UTSW 11 100698208 missense probably benign 0.00
R5397:Dhx58 UTSW 11 100703920 missense probably damaging 1.00
R5787:Dhx58 UTSW 11 100701319 missense possibly damaging 0.91
R6310:Dhx58 UTSW 11 100699367 missense probably benign 0.01
R6935:Dhx58 UTSW 11 100698406 splice site probably null
R7311:Dhx58 UTSW 11 100698171 missense probably benign
R7908:Dhx58 UTSW 11 100695304 missense probably damaging 0.99
R8317:Dhx58 UTSW 11 100703562 missense probably damaging 1.00
R8821:Dhx58 UTSW 11 100703980 missense probably damaging 1.00
R8831:Dhx58 UTSW 11 100703980 missense probably damaging 1.00
Predicted Primers PCR Primer
(F):5'- AGACTATGGACTTGGGCTATGG -3'
(R):5'- TAACTTCCAGTGGAGTGGCC -3'

Sequencing Primer
(F):5'- GCTATGGGTGCCTCAAAGC -3'
(R):5'- GCTTTTCTGTCCTTAGCCAGG -3'
Posted On 2017-03-31