Incidental Mutation 'R0502:Utp25'
ID 47176
Institutional Source Beutler Lab
Gene Symbol Utp25
Ensembl Gene ENSMUSG00000016181
Gene Name UTP25 small subunit processome component
Synonyms AA408296, mDef, Diexf
MMRRC Submission 038697-MU
Accession Numbers
Essential gene? Probably essential (E-score: 0.970) question?
Stock # R0502 (G1)
Quality Score 225
Status Validated
Chromosome 1
Chromosomal Location 192786707-192812603 bp(-) (GRCm39)
Type of Mutation splice site
DNA Base Change (assembly) A to T at 192797136 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000141676 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000085555] [ENSMUST00000193460] [ENSMUST00000195291]
AlphaFold no structure available at present
Predicted Effect probably benign
Transcript: ENSMUST00000085555
SMART Domains Protein: ENSMUSP00000082691
Gene: ENSMUSG00000016181

DomainStartEndE-ValueType
low complexity region 51 70 N/A INTRINSIC
coiled coil region 72 113 N/A INTRINSIC
low complexity region 123 139 N/A INTRINSIC
low complexity region 217 224 N/A INTRINSIC
Pfam:UTP25 288 763 6.1e-200 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000193070
Predicted Effect probably benign
Transcript: ENSMUST00000193460
SMART Domains Protein: ENSMUSP00000142059
Gene: ENSMUSG00000016181

DomainStartEndE-ValueType
Pfam:DUF1253 1 205 6.8e-78 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000194412
Predicted Effect probably benign
Transcript: ENSMUST00000195291
SMART Domains Protein: ENSMUSP00000141676
Gene: ENSMUSG00000016181

DomainStartEndE-ValueType
low complexity region 51 70 N/A INTRINSIC
coiled coil region 72 113 N/A INTRINSIC
low complexity region 123 139 N/A INTRINSIC
low complexity region 217 224 N/A INTRINSIC
Pfam:DUF1253 325 634 6.9e-100 PFAM
Meta Mutation Damage Score 0.0898 question?
Coding Region Coverage
  • 1x: 99.3%
  • 3x: 98.6%
  • 10x: 97.0%
  • 20x: 94.7%
Validation Efficiency 100% (63/63)
Allele List at MGI
Other mutations in this stock
Total: 63 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
9930111J21Rik1 T C 11: 48,838,322 (GRCm39) H755R possibly damaging Het
Ano1 A G 7: 144,150,952 (GRCm39) L821P probably damaging Het
Apol10b T A 15: 77,476,349 (GRCm39) probably benign Het
Atp2c2 A G 8: 120,461,316 (GRCm39) E279G probably null Het
Ccar2 A G 14: 70,378,431 (GRCm39) S625P probably benign Het
Ccdc110 A G 8: 46,387,761 (GRCm39) probably benign Het
Cep350 A T 1: 155,776,629 (GRCm39) probably null Het
Chd3 A G 11: 69,244,931 (GRCm39) V1203A probably damaging Het
Col24a1 A G 3: 145,251,071 (GRCm39) probably benign Het
Col6a6 A T 9: 105,644,550 (GRCm39) M1246K probably benign Het
Crot A G 5: 9,026,075 (GRCm39) V304A possibly damaging Het
Dapk1 T A 13: 60,878,662 (GRCm39) probably null Het
Dicer1 A T 12: 104,671,319 (GRCm39) S984T probably damaging Het
Dmbt1 G A 7: 130,699,403 (GRCm39) probably null Het
Dnah7b A T 1: 46,258,704 (GRCm39) E1965V probably damaging Het
Dpp4 G T 2: 62,195,332 (GRCm39) N315K probably damaging Het
Eeig2 G A 3: 108,900,001 (GRCm39) R116C probably damaging Het
Fat4 T A 3: 39,057,073 (GRCm39) S4256R probably damaging Het
Fcho1 C T 8: 72,165,204 (GRCm39) A418T probably benign Het
Gpatch4 A G 3: 87,962,672 (GRCm39) D295G probably benign Het
Gpbar1 A T 1: 74,318,551 (GRCm39) I265F probably benign Het
Gria1 T G 11: 57,080,542 (GRCm39) V175G probably damaging Het
Hacl1 A T 14: 31,344,941 (GRCm39) probably benign Het
Hnrnpc A G 14: 52,312,629 (GRCm39) probably benign Het
Hoxa13 CCG CCGCG 6: 52,237,618 (GRCm39) probably null Het
Ifnar1 T A 16: 91,298,639 (GRCm39) C419S probably damaging Het
Irx4 T A 13: 73,414,703 (GRCm39) probably null Het
Itga2 T G 13: 114,982,392 (GRCm39) N1038H probably benign Het
Kif16b C T 2: 142,554,075 (GRCm39) D908N probably benign Het
Lamc1 A G 1: 153,122,678 (GRCm39) probably benign Het
Lrig3 A G 10: 125,844,605 (GRCm39) T690A probably damaging Het
Lrp2 T C 2: 69,341,361 (GRCm39) K940E probably damaging Het
Macf1 A G 4: 123,363,608 (GRCm39) S1775P probably damaging Het
Mrps27 G T 13: 99,546,303 (GRCm39) probably benign Het
Ncam1 A G 9: 49,481,118 (GRCm39) probably benign Het
Nopchap1 A G 10: 83,197,920 (GRCm39) D42G probably damaging Het
Or2z2 T C 11: 58,346,140 (GRCm39) I212V possibly damaging Het
Or51a5 A T 7: 102,771,643 (GRCm39) M112K possibly damaging Het
Pbrm1 T G 14: 30,786,777 (GRCm39) D631E probably benign Het
Pdc A T 1: 150,204,165 (GRCm39) probably benign Het
Pkd1 T C 17: 24,793,766 (GRCm39) S1818P probably damaging Het
Ptpru T C 4: 131,520,954 (GRCm39) N784S probably benign Het
Rab35 G A 5: 115,783,723 (GRCm39) R170Q probably benign Het
Rerg A T 6: 137,033,305 (GRCm39) C123* probably null Het
Ros1 A G 10: 52,070,919 (GRCm39) probably benign Het
Siglece A G 7: 43,309,355 (GRCm39) Y68H probably damaging Het
Slc28a2 T A 2: 122,288,762 (GRCm39) probably null Het
Slc4a11 T C 2: 130,530,077 (GRCm39) K234E probably damaging Het
Sqor C T 2: 122,639,970 (GRCm39) P158S probably benign Het
Tcerg1 C T 18: 42,656,021 (GRCm39) P110S unknown Het
Tm6sf2 T A 8: 70,530,591 (GRCm39) Y224N probably damaging Het
Tmem39b A C 4: 129,580,779 (GRCm39) Y238D possibly damaging Het
Ttll10 T C 4: 156,132,005 (GRCm39) probably benign Het
Ubap2l A T 3: 89,916,520 (GRCm39) L898Q probably damaging Het
Uggt1 A T 1: 36,199,027 (GRCm39) V1207E probably damaging Het
Uhrf2 A G 19: 30,070,176 (GRCm39) D775G probably damaging Het
Vmn1r196 G A 13: 22,477,557 (GRCm39) M65I probably benign Het
Vmn1r87 T G 7: 12,865,583 (GRCm39) T235P probably damaging Het
Vmn2r96 T A 17: 18,804,262 (GRCm39) M504K probably benign Het
Zdbf2 A T 1: 63,344,449 (GRCm39) I943F possibly damaging Het
Zfp78 A G 7: 6,376,157 (GRCm39) D22G probably damaging Het
Zfp827 C T 8: 79,905,706 (GRCm39) probably null Het
Zfyve9 A T 4: 108,576,961 (GRCm39) L40* probably null Het
Other mutations in Utp25
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00754:Utp25 APN 1 192,797,309 (GRCm39) missense probably damaging 1.00
IGL01700:Utp25 APN 1 192,800,573 (GRCm39) missense probably damaging 1.00
IGL02076:Utp25 APN 1 192,812,367 (GRCm39) missense probably damaging 1.00
IGL02121:Utp25 APN 1 192,800,586 (GRCm39) missense probably benign 0.05
IGL02666:Utp25 APN 1 192,789,904 (GRCm39) nonsense probably null
IGL02997:Utp25 APN 1 192,802,892 (GRCm39) missense probably benign 0.34
3-1:Utp25 UTSW 1 192,800,588 (GRCm39) missense probably benign 0.07
R0099:Utp25 UTSW 1 192,810,778 (GRCm39) missense probably damaging 1.00
R0395:Utp25 UTSW 1 192,805,984 (GRCm39) missense possibly damaging 0.69
R0973:Utp25 UTSW 1 192,797,011 (GRCm39) missense probably damaging 0.98
R0973:Utp25 UTSW 1 192,797,011 (GRCm39) missense probably damaging 0.98
R0974:Utp25 UTSW 1 192,797,011 (GRCm39) missense probably damaging 0.98
R1815:Utp25 UTSW 1 192,800,591 (GRCm39) missense probably benign 0.26
R1930:Utp25 UTSW 1 192,800,617 (GRCm39) missense probably damaging 1.00
R1931:Utp25 UTSW 1 192,800,617 (GRCm39) missense probably damaging 1.00
R1937:Utp25 UTSW 1 192,804,401 (GRCm39) missense probably damaging 1.00
R2847:Utp25 UTSW 1 192,810,759 (GRCm39) missense probably benign 0.41
R2848:Utp25 UTSW 1 192,810,759 (GRCm39) missense probably benign 0.41
R3412:Utp25 UTSW 1 192,810,810 (GRCm39) missense possibly damaging 0.93
R3414:Utp25 UTSW 1 192,810,810 (GRCm39) missense possibly damaging 0.93
R4471:Utp25 UTSW 1 192,812,445 (GRCm39) missense possibly damaging 0.68
R4627:Utp25 UTSW 1 192,790,003 (GRCm39) missense probably benign 0.00
R4644:Utp25 UTSW 1 192,810,788 (GRCm39) missense probably damaging 1.00
R4761:Utp25 UTSW 1 192,796,230 (GRCm39) missense probably damaging 1.00
R4791:Utp25 UTSW 1 192,810,575 (GRCm39) missense probably benign
R4793:Utp25 UTSW 1 192,796,116 (GRCm39) missense probably null 0.56
R4858:Utp25 UTSW 1 192,796,072 (GRCm39) missense probably damaging 1.00
R4944:Utp25 UTSW 1 192,797,262 (GRCm39) missense probably damaging 1.00
R5162:Utp25 UTSW 1 192,796,089 (GRCm39) missense probably damaging 1.00
R5347:Utp25 UTSW 1 192,810,687 (GRCm39) missense probably benign
R5837:Utp25 UTSW 1 192,800,701 (GRCm39) missense probably damaging 1.00
R6113:Utp25 UTSW 1 192,811,810 (GRCm39) missense probably null 0.01
R6455:Utp25 UTSW 1 192,810,684 (GRCm39) missense probably benign 0.07
R6563:Utp25 UTSW 1 192,800,698 (GRCm39) missense probably damaging 1.00
R6636:Utp25 UTSW 1 192,796,075 (GRCm39) missense probably damaging 1.00
R7018:Utp25 UTSW 1 192,797,163 (GRCm39) missense probably benign 0.06
R7037:Utp25 UTSW 1 192,803,031 (GRCm39) splice site probably null
R8027:Utp25 UTSW 1 192,800,530 (GRCm39) missense probably benign
R8042:Utp25 UTSW 1 192,796,980 (GRCm39) missense
R8092:Utp25 UTSW 1 192,802,671 (GRCm39) missense probably benign 0.00
R8243:Utp25 UTSW 1 192,796,937 (GRCm39) missense probably benign
R8691:Utp25 UTSW 1 192,796,110 (GRCm39) missense probably benign 0.41
R9485:Utp25 UTSW 1 192,812,541 (GRCm39) unclassified probably benign
RF021:Utp25 UTSW 1 192,802,974 (GRCm39) missense probably benign
X0050:Utp25 UTSW 1 192,806,040 (GRCm39) missense probably benign 0.23
Z1177:Utp25 UTSW 1 192,796,983 (GRCm39) missense probably damaging 1.00
Predicted Primers PCR Primer
(F):5'- CGTTACCTGGCATCGATCACTGAAG -3'
(R):5'- TTGCACCAAGCATTTGATGAACCAC -3'

Sequencing Primer
(F):5'- CCATTCTCTGGAAGACGTGAG -3'
(R):5'- TTTGATGAACCACATGAACCTGC -3'
Posted On 2013-06-12