Incidental Mutation 'R3617:Pip'
ID 473064
Institutional Source Beutler Lab
Gene Symbol Pip
Ensembl Gene ENSMUSG00000058499
Gene Name prolactin induced protein
Synonyms GCDFP-15, mSMGP, gross cystic disease fluid protein 15
MMRRC Submission 040674-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.060) question?
Stock # R3617 (G1)
Quality Score 225
Status Not validated
Chromosome 6
Chromosomal Location 41824483-41828999 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to G at 41828871 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Threonine to Alanine at position 139 (T139A)
Ref Sequence ENSEMBL: ENSMUSP00000074818 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000075351] [ENSMUST00000120605] [ENSMUST00000203244]
AlphaFold P02816
Predicted Effect probably benign
Transcript: ENSMUST00000075351
AA Change: T139A

PolyPhen 2 Score 0.230 (Sensitivity: 0.91; Specificity: 0.88)
SMART Domains Protein: ENSMUSP00000074818
Gene: ENSMUSG00000058499
AA Change: T139A

DomainStartEndE-ValueType
Pfam:SVA 1 126 5.9e-56 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000120605
SMART Domains Protein: ENSMUSP00000113417
Gene: ENSMUSG00000014104

DomainStartEndE-ValueType
Pfam:SVA 1 85 1.4e-35 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000203244
SMART Domains Protein: ENSMUSP00000144995
Gene: ENSMUSG00000058499

DomainStartEndE-ValueType
Pfam:SVA 1 107 3.2e-42 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000204575
Coding Region Coverage
  • 1x: 99.1%
  • 3x: 98.5%
  • 10x: 97.1%
  • 20x: 94.4%
Validation Efficiency 98% (41/42)
MGI Phenotype PHENOTYPE: Mice homozygous for a knock-out allele exhibit enlarged submandibular lymph nodes, enlarged medulla of the thymus and abnormal prostate gland dorsolateral lobe morphology. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 41 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abcc9 A G 6: 142,625,015 (GRCm39) V460A probably damaging Het
Aplf T C 6: 87,648,865 (GRCm39) I25V possibly damaging Het
Ascc3 A G 10: 50,494,281 (GRCm39) T239A probably benign Het
Bahd1 G A 2: 118,753,004 (GRCm39) R757H probably damaging Het
Cbfa2t2 A T 2: 154,278,904 (GRCm39) probably benign Het
Ccdc168 T C 1: 44,100,114 (GRCm39) D328G probably benign Het
Cdkn1c C T 7: 143,013,531 (GRCm39) probably benign Het
Cfap46 A G 7: 139,219,515 (GRCm39) S1317P probably benign Het
Cntln C T 4: 84,923,214 (GRCm39) Q560* probably null Het
Cntn2 G C 1: 132,456,361 (GRCm39) A161G probably benign Het
Crybg1 A G 10: 43,832,782 (GRCm39) I1991T possibly damaging Het
Cttnbp2 T C 6: 18,414,189 (GRCm39) E952G probably damaging Het
Dhx36 T C 3: 62,379,428 (GRCm39) T887A possibly damaging Het
Dhx36 A G 3: 62,394,481 (GRCm39) F512L probably benign Het
Fthl17f A G X: 8,929,862 (GRCm39) T153A probably benign Het
Gad1-ps T A 10: 99,281,260 (GRCm39) noncoding transcript Het
Gba2 C T 4: 43,573,803 (GRCm39) R163H probably damaging Het
Gm10717 A G 9: 3,025,532 (GRCm39) Y39C probably benign Het
Gm17019 A T 5: 15,081,081 (GRCm39) M120K possibly damaging Het
Helz2 C T 2: 180,874,854 (GRCm39) R1880H probably damaging Het
Ifi204 T C 1: 173,583,283 (GRCm39) I312V possibly damaging Het
Kncn T C 4: 115,743,089 (GRCm39) F55L probably benign Het
Kndc1 G A 7: 139,481,976 (GRCm39) probably benign Het
Nat8f3 C A 6: 85,738,670 (GRCm39) A31S probably benign Het
Ndst4 T C 3: 125,231,782 (GRCm39) I117T probably benign Het
Ndufa9 G T 6: 126,826,071 (GRCm39) probably benign Het
Nup42 T C 5: 24,387,325 (GRCm39) S372P probably benign Het
Pde6a A G 18: 61,364,575 (GRCm39) probably benign Het
Pigw T C 11: 84,769,133 (GRCm39) I65M probably damaging Het
Rel A T 11: 23,695,780 (GRCm39) D202E probably damaging Het
Rhot2 A G 17: 26,059,955 (GRCm39) probably benign Het
Sh3rf3 G A 10: 58,922,685 (GRCm39) R587Q possibly damaging Het
Sim1 T A 10: 50,785,624 (GRCm39) M231K probably damaging Het
Slc12a9 G A 5: 137,330,759 (GRCm39) T47M probably damaging Het
Slc4a4 A G 5: 89,382,663 (GRCm39) D1036G probably benign Het
Tas2r143 A T 6: 42,377,997 (GRCm39) I276F probably benign Het
Tgfbr3 A T 5: 107,288,485 (GRCm39) F392Y possibly damaging Het
Tmem266 T C 9: 55,307,918 (GRCm39) V148A probably damaging Het
Ubiad1 A G 4: 148,520,817 (GRCm39) I269T probably benign Het
Vwc2l A G 1: 70,768,041 (GRCm39) probably null Het
Zbtb49 G A 5: 38,357,975 (GRCm39) probably benign Het
Other mutations in Pip
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL02893:Pip APN 6 41,824,596 (GRCm39) missense probably damaging 0.99
R0312:Pip UTSW 6 41,826,798 (GRCm39) missense possibly damaging 0.82
R0539:Pip UTSW 6 41,826,819 (GRCm39) nonsense probably null
R1432:Pip UTSW 6 41,826,852 (GRCm39) missense probably benign 0.41
R3122:Pip UTSW 6 41,828,819 (GRCm39) missense probably damaging 0.99
R6431:Pip UTSW 6 41,828,391 (GRCm39) missense possibly damaging 0.58
R7180:Pip UTSW 6 41,824,565 (GRCm39) missense probably damaging 1.00
R8236:Pip UTSW 6 41,824,596 (GRCm39) missense probably damaging 0.99
R8534:Pip UTSW 6 41,828,421 (GRCm39) missense probably benign 0.29
R9077:Pip UTSW 6 41,828,388 (GRCm39) missense probably damaging 1.00
R9400:Pip UTSW 6 41,828,782 (GRCm39) missense probably benign 0.27
X0054:Pip UTSW 6 41,828,472 (GRCm39) missense probably damaging 0.99
Predicted Primers
Posted On 2017-04-14