Mutagenetix > Incidental Mutation

Incidental Mutation 'R3945:Zfp988'

474786

Institutional Source

Beutler Lab

Gene Symbol

Zfp988

Ensembl Gene

ENSMUSG00000078498

Gene Name

zinc finger protein 988

Synonyms

Gm13151

MMRRC Submission

040926-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.161) question?

Stock #

R3945 (G1)

Quality Score

Status

Validated

Chromosome

Chromosomal Location

147390131-147418191 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to C at 147417242 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Lysine to Glutamine at position 559 (K559Q)

Ref Sequence

ENSEMBL: ENSMUSP00000120413 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000148762] [ENSMUST00000166764]

AlphaFold

F6VKC7

Predicted Effect

probably benign
Transcript: ENSMUST00000148762
AA Change: K559Q

PolyPhen 2 Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)

SMART Domains

Protein: ENSMUSP00000120413
Gene: ENSMUSG00000078498
AA Change: K559Q

Domain	Start	End	E-Value	Type
KRAB	13	76	4.74e-16	SMART
ZnF_C2H2	240	262	2.61e-4	SMART
ZnF_C2H2	268	290	1.3e-4	SMART
ZnF_C2H2	296	318	9.73e-4	SMART
ZnF_C2H2	324	346	7.78e-3	SMART
ZnF_C2H2	352	374	1.3e-4	SMART
ZnF_C2H2	380	402	8.34e-3	SMART
ZnF_C2H2	408	430	2.79e-4	SMART
ZnF_C2H2	436	458	3.74e-5	SMART
ZnF_C2H2	464	486	1.3e-4	SMART
ZnF_C2H2	492	514	1.5e-4	SMART
ZnF_C2H2	520	542	2.43e-4	SMART
ZnF_C2H2	548	570	9.73e-4	SMART
ZnF_C2H2	576	598	1.56e-2	SMART
ZnF_C2H2	604	626	2.53e-2	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000166764

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000181084

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000181486

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000181752

Meta Mutation Damage Score

0.0898

Coding Region Coverage

1x: 99.2%
3x: 98.7%
10x: 97.4%
20x: 95.4%

Validation Efficiency

100% (54/54)

Allele List at MGI

Other mutations in this stock

Total: 49 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
4930407I10Rik	T	C	15: 81,949,601 (GRCm39)	L1166P	probably damaging	Het
Actn4	T	C	7: 28,611,661 (GRCm39)		probably null	Het
Adamts17	A	T	7: 66,770,687 (GRCm39)	E905V	probably benign	Het
Adck5	A	G	15: 76,479,400 (GRCm39)	N485S	probably damaging	Het
Agr3	C	A	12: 35,997,512 (GRCm39)		probably benign	Het
Ankrd12	G	A	17: 66,283,098 (GRCm39)	T1921I	probably damaging	Het
Ascl2	T	C	7: 142,521,708 (GRCm39)	S247G	probably benign	Het
Atp7b	T	C	8: 22,510,880 (GRCm39)	E422G	probably benign	Het
Bltp2	T	C	11: 78,180,790 (GRCm39)	I2229T	probably damaging	Het
C630050I24Rik	C	T	8: 107,845,894 (GRCm39)	R15*	probably null	Het
Cabin1	T	G	10: 75,581,093 (GRCm39)	Q411P	probably damaging	Het
Chrne	T	C	11: 70,507,869 (GRCm39)	I277V	possibly damaging	Het
Coch	A	G	12: 51,648,595 (GRCm39)		probably null	Het
Corin	A	G	5: 72,515,767 (GRCm39)	V429A	probably damaging	Het
Cpa3	A	T	3: 20,279,281 (GRCm39)	N219K	probably damaging	Het
Creb3l1	T	C	2: 91,821,556 (GRCm39)	E273G	probably damaging	Het
Csmd1	A	C	8: 15,960,619 (GRCm39)		probably null	Het
Ddx59	A	G	1: 136,362,356 (GRCm39)	D527G	probably damaging	Het
Defa25	G	A	8: 21,574,506 (GRCm39)	V17I	probably null	Het
Efs	A	G	14: 55,158,108 (GRCm39)		probably benign	Het
Ern2	A	G	7: 121,775,753 (GRCm39)	M447T	probably benign	Het
Fgfr2	C	T	7: 129,779,485 (GRCm39)	E596K	possibly damaging	Het
Filip1	T	C	9: 79,725,649 (GRCm39)	K990R	probably benign	Het
Ipo8	T	A	6: 148,719,615 (GRCm39)	Q110L	probably damaging	Het
Kank4	T	A	4: 98,659,517 (GRCm39)	I854F	probably damaging	Het
Mst1	G	A	9: 107,962,052 (GRCm39)	C681Y	probably damaging	Het
Nr2c2	C	T	6: 92,140,119 (GRCm39)	R464W	probably damaging	Het
Or1s2	A	G	19: 13,758,786 (GRCm39)	E270G	probably benign	Het
Or4f4b	C	T	2: 111,314,032 (GRCm39)	Q86*	probably null	Het
Pde11a	T	C	2: 75,906,275 (GRCm39)		probably benign	Het
Ptprq	A	G	10: 107,522,253 (GRCm39)		probably benign	Het
Rcbtb1	G	A	14: 59,462,225 (GRCm39)		probably null	Het
Rpl37	G	A	15: 5,147,176 (GRCm39)	R72H	probably benign	Het
Samd9l	A	T	6: 3,377,029 (GRCm39)	S77R	possibly damaging	Het
Sin3b	A	G	8: 73,460,067 (GRCm39)	D218G	possibly damaging	Het
Slc22a23	A	G	13: 34,367,109 (GRCm39)	I633T	probably damaging	Het
Spen	T	C	4: 141,204,664 (GRCm39)	D1321G	unknown	Het
Ssh2	T	C	11: 77,345,494 (GRCm39)	S1160P	possibly damaging	Het
Synrg	T	A	11: 83,914,232 (GRCm39)	D952E	probably damaging	Het
Tigd3	A	G	19: 5,942,461 (GRCm39)	F223S	probably damaging	Het
Trim66	G	A	7: 109,071,475 (GRCm39)	T608I	possibly damaging	Het
Trmt13	A	G	3: 116,375,167 (GRCm39)	F447S	probably damaging	Het
Trpc2	T	C	7: 101,737,486 (GRCm39)	I800T	possibly damaging	Het
Ugt3a1	A	T	15: 9,370,184 (GRCm39)	I443F	possibly damaging	Het
Vamp2	C	A	11: 68,980,000 (GRCm39)	P24Q	unknown	Het
Vmn1r113	A	G	7: 20,521,637 (GRCm39)	Y143C	probably benign	Het
Vmn1r14	T	A	6: 57,211,254 (GRCm39)	N277K	probably benign	Het
Vmn1r181	T	A	7: 23,683,577 (GRCm39)	V14E	probably damaging	Het
Wdfy4	A	T	14: 32,688,352 (GRCm39)	I3086N	probably damaging	Het

Other mutations in Zfp988

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL02282:Zfp988	APN	4	147,416,125 (GRCm39)	nonsense	probably null
R1672:Zfp988	UTSW	4	147,415,739 (GRCm39)	missense	probably benign
R1834:Zfp988	UTSW	4	147,417,344 (GRCm39)	missense	probably damaging	0.97
R2324:Zfp988	UTSW	4	147,417,242 (GRCm39)	missense	probably benign
R2380:Zfp988	UTSW	4	147,417,242 (GRCm39)	missense	probably benign
R3795:Zfp988	UTSW	4	147,416,040 (GRCm39)	missense	possibly damaging	0.51
R4024:Zfp988	UTSW	4	147,417,242 (GRCm39)	missense	probably benign
R5012:Zfp988	UTSW	4	147,416,060 (GRCm39)	missense	probably benign
R5059:Zfp988	UTSW	4	147,416,372 (GRCm39)	nonsense	probably null
R6008:Zfp988	UTSW	4	147,416,259 (GRCm39)	missense	probably benign	0.16
R6245:Zfp988	UTSW	4	147,416,470 (GRCm39)	nonsense	probably null
R6549:Zfp988	UTSW	4	147,416,310 (GRCm39)	missense	probably benign	0.03
R7658:Zfp988	UTSW	4	147,416,751 (GRCm39)	missense	probably damaging	1.00
R8309:Zfp988	UTSW	4	147,416,765 (GRCm39)	missense	probably damaging	0.99
R8439:Zfp988	UTSW	4	147,416,808 (GRCm39)	missense	probably benign	0.01
R9159:Zfp988	UTSW	4	147,416,450 (GRCm39)	missense	possibly damaging	0.91

Predicted Primers

PCR Primer
(F):5'- GCAATGAATGTGGCAAATGCTTTAC -3'
(R):5'- TCACTGTTACAGTCTAGGAAATAGGCC -3'

Sequencing Primer
(F):5'- cagtgaatgtggcaaatgc -3'
(R):5'- TGAATACCAAGATGGAATTTTCGGG -3'

Posted On

2017-04-14