Incidental Mutation 'R3962:Ccdc13'
ID 475128
Institutional Source Beutler Lab
Gene Symbol Ccdc13
Ensembl Gene ENSMUSG00000079235
Gene Name coiled-coil domain containing 13
Synonyms 2900041A11Rik
MMRRC Submission 040837-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.083) question?
Stock # R3962 (G1)
Quality Score 225
Status Not validated
Chromosome 9
Chromosomal Location 121626693-121668527 bp(-) (GRCm39)
Type of Mutation intron
DNA Base Change (assembly) G to A at 121628005 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000128061 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000135986] [ENSMUST00000142783] [ENSMUST00000155511]
AlphaFold D3YV10
Predicted Effect noncoding transcript
Transcript: ENSMUST00000126851
Predicted Effect probably benign
Transcript: ENSMUST00000135986
SMART Domains Protein: ENSMUSP00000114787
Gene: ENSMUSG00000079235

DomainStartEndE-ValueType
coiled coil region 19 46 N/A INTRINSIC
coiled coil region 70 103 N/A INTRINSIC
coiled coil region 139 178 N/A INTRINSIC
coiled coil region 206 248 N/A INTRINSIC
low complexity region 293 304 N/A INTRINSIC
coiled coil region 323 370 N/A INTRINSIC
coiled coil region 428 458 N/A INTRINSIC
coiled coil region 550 604 N/A INTRINSIC
coiled coil region 648 670 N/A INTRINSIC
Predicted Effect noncoding transcript
Transcript: ENSMUST00000140929
Predicted Effect unknown
Transcript: ENSMUST00000142783
AA Change: T204I
SMART Domains Protein: ENSMUSP00000130887
Gene: ENSMUSG00000079235
AA Change: T204I

DomainStartEndE-ValueType
coiled coil region 68 122 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000155511
Coding Region Coverage
  • 1x: 99.1%
  • 3x: 98.5%
  • 10x: 97.0%
  • 20x: 93.9%
Validation Efficiency 96% (48/50)
Allele List at MGI
Other mutations in this stock
Total: 49 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
9930111J21Rik1 T C 11: 48,838,803 (GRCm39) T595A possibly damaging Het
Abca12 A T 1: 71,313,674 (GRCm39) probably null Het
Ablim2 C T 5: 35,969,519 (GRCm39) R211C probably damaging Het
Actn4 C A 7: 28,597,647 (GRCm39) probably null Het
B3gnt5 A G 16: 19,587,798 (GRCm39) S6G probably benign Het
Bod1l T G 5: 41,966,064 (GRCm39) E2667A probably benign Het
Ccdc15 G T 9: 37,231,782 (GRCm39) R181S probably damaging Het
Ccnd1 G A 7: 144,487,787 (GRCm39) T230M probably damaging Het
Cdcp1 T C 9: 123,011,446 (GRCm39) T344A possibly damaging Het
Fam161a T C 11: 22,973,507 (GRCm39) M275T possibly damaging Het
Fbxo15 A G 18: 84,977,372 (GRCm39) T95A probably benign Het
Fndc5 T C 4: 129,033,688 (GRCm39) V152A probably benign Het
Galk2 A T 2: 125,735,293 (GRCm39) N107I probably benign Het
Glmn A T 5: 107,708,911 (GRCm39) probably benign Het
Gm5082 T C 13: 41,809,894 (GRCm39) noncoding transcript Het
Gm5828 C T 1: 16,838,868 (GRCm39) noncoding transcript Het
Haus6 C T 4: 86,530,041 (GRCm39) A4T possibly damaging Het
Hmgcs2 G A 3: 98,198,354 (GRCm39) V86M possibly damaging Het
Hrg G A 16: 22,774,825 (GRCm39) V152I possibly damaging Het
Itga2 A T 13: 114,976,054 (GRCm39) V1106E probably damaging Het
Itga9 G A 9: 118,457,254 (GRCm39) D122N possibly damaging Het
Kif21a T A 15: 90,869,612 (GRCm39) E413V probably damaging Het
Klk1 A G 7: 43,878,973 (GRCm39) T256A possibly damaging Het
L1td1 T C 4: 98,625,686 (GRCm39) V627A probably benign Het
Larp4 C A 15: 99,910,026 (GRCm39) Q652K probably damaging Het
Ltbp3 G A 19: 5,804,050 (GRCm39) R854Q probably benign Het
Minar1 G A 9: 89,483,963 (GRCm39) T478I probably damaging Het
Moxd2 T A 6: 40,862,331 (GRCm39) M163L probably benign Het
Myo15a G A 11: 60,370,654 (GRCm39) R1138H probably benign Het
Oasl2 A G 5: 115,035,808 (GRCm39) D28G probably benign Het
Or6c207 A T 10: 129,104,535 (GRCm39) I219N probably damaging Het
Platr26 A T 2: 71,549,849 (GRCm39) noncoding transcript Het
Ptdss1 A G 13: 67,142,075 (GRCm39) H411R probably benign Het
Ptpra A G 2: 30,325,672 (GRCm39) T147A probably damaging Het
Rfx2 T C 17: 57,092,302 (GRCm39) Y307C probably damaging Het
Rtn3 T C 19: 7,435,510 (GRCm39) S142G probably damaging Het
Shisa6 A G 11: 66,108,302 (GRCm39) V525A probably damaging Het
Slc4a3 A G 1: 75,533,398 (GRCm39) S1007G probably damaging Het
Spmip5 A G 19: 58,777,541 (GRCm39) Y82H probably damaging Het
Srsf3 C T 17: 29,255,430 (GRCm39) probably benign Het
Taar8a A G 10: 23,953,054 (GRCm39) I219M probably damaging Het
Tars2 A G 3: 95,662,068 (GRCm39) probably null Het
Tfap2d A G 1: 19,189,189 (GRCm39) N245S probably damaging Het
Tlr6 T A 5: 65,112,328 (GRCm39) H193L probably benign Het
Tomm20l T C 12: 71,164,352 (GRCm39) V78A probably benign Het
Tsc2 G A 17: 24,840,140 (GRCm39) probably benign Het
Usp2 A G 9: 43,986,954 (GRCm39) D84G possibly damaging Het
V1ra8 A G 6: 90,180,466 (GRCm39) N223S probably benign Het
Wnk2 C A 13: 49,224,453 (GRCm39) R1122L probably damaging Het
Other mutations in Ccdc13
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01111:Ccdc13 APN 9 121,639,150 (GRCm39) splice site probably benign
IGL01306:Ccdc13 APN 9 121,656,429 (GRCm39) missense probably benign 0.37
ANU23:Ccdc13 UTSW 9 121,656,429 (GRCm39) missense probably benign 0.37
R0112:Ccdc13 UTSW 9 121,642,547 (GRCm39) missense probably damaging 0.98
R0144:Ccdc13 UTSW 9 121,656,417 (GRCm39) missense probably damaging 0.98
R0360:Ccdc13 UTSW 9 121,627,282 (GRCm39) missense probably damaging 1.00
R0364:Ccdc13 UTSW 9 121,627,282 (GRCm39) missense probably damaging 1.00
R1441:Ccdc13 UTSW 9 121,642,515 (GRCm39) missense probably benign 0.44
R1674:Ccdc13 UTSW 9 121,638,208 (GRCm39) missense probably damaging 1.00
R1691:Ccdc13 UTSW 9 121,654,134 (GRCm39) splice site probably null
R1710:Ccdc13 UTSW 9 121,648,647 (GRCm39) missense probably damaging 1.00
R3821:Ccdc13 UTSW 9 121,660,085 (GRCm39) missense probably damaging 1.00
R3822:Ccdc13 UTSW 9 121,660,085 (GRCm39) missense probably damaging 1.00
R4695:Ccdc13 UTSW 9 121,649,826 (GRCm39) missense probably damaging 1.00
R4758:Ccdc13 UTSW 9 121,662,800 (GRCm39) missense possibly damaging 0.91
R5058:Ccdc13 UTSW 9 121,646,613 (GRCm39) intron probably benign
R5283:Ccdc13 UTSW 9 121,637,254 (GRCm39) missense probably damaging 1.00
R5436:Ccdc13 UTSW 9 121,628,109 (GRCm39) missense probably benign 0.06
R5601:Ccdc13 UTSW 9 121,629,638 (GRCm39) nonsense probably null
R5623:Ccdc13 UTSW 9 121,662,799 (GRCm39) missense probably damaging 0.99
R5653:Ccdc13 UTSW 9 121,627,853 (GRCm39) makesense probably null
R5665:Ccdc13 UTSW 9 121,643,356 (GRCm39) missense probably damaging 0.99
R5975:Ccdc13 UTSW 9 121,656,301 (GRCm39) missense probably benign 0.00
R6212:Ccdc13 UTSW 9 121,627,975 (GRCm39) intron probably benign
R6213:Ccdc13 UTSW 9 121,627,975 (GRCm39) intron probably benign
R6214:Ccdc13 UTSW 9 121,627,975 (GRCm39) intron probably benign
R6215:Ccdc13 UTSW 9 121,627,975 (GRCm39) intron probably benign
R6222:Ccdc13 UTSW 9 121,627,975 (GRCm39) intron probably benign
R6223:Ccdc13 UTSW 9 121,627,975 (GRCm39) intron probably benign
R6257:Ccdc13 UTSW 9 121,627,975 (GRCm39) intron probably benign
R7053:Ccdc13 UTSW 9 121,662,904 (GRCm39) missense probably damaging 0.97
R7664:Ccdc13 UTSW 9 121,643,279 (GRCm39) missense probably benign 0.01
R7909:Ccdc13 UTSW 9 121,662,926 (GRCm39) missense probably benign 0.01
R7943:Ccdc13 UTSW 9 121,628,196 (GRCm39) missense unknown
R8464:Ccdc13 UTSW 9 121,649,824 (GRCm39) missense probably damaging 0.98
R8827:Ccdc13 UTSW 9 121,645,765 (GRCm39) missense probably benign 0.09
R9445:Ccdc13 UTSW 9 121,627,156 (GRCm39) missense probably benign 0.01
RF006:Ccdc13 UTSW 9 121,643,273 (GRCm39) missense probably damaging 1.00
Predicted Primers
Posted On 2017-04-14