Incidental Mutation 'R6031:Jade2'
ID 480414
Institutional Source Beutler Lab
Gene Symbol Jade2
Ensembl Gene ENSMUSG00000020387
Gene Name jade family PHD finger 2
Synonyms 1200017K05Rik, Phf15
MMRRC Submission 044203-MU
Accession Numbers
Essential gene? Non essential (E-score: 0.000) question?
Stock # R6031 (G1)
Quality Score 175.009
Status Not validated
Chromosome 11
Chromosomal Location 51704282-51748480 bp(-) (GRCm39)
Type of Mutation nonsense
DNA Base Change (assembly) G to T at 51717413 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Cysteine to Stop codon at position 314 (C314*)
Ref Sequence ENSEMBL: ENSMUSP00000104719 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000020655] [ENSMUST00000109090] [ENSMUST00000109091]
AlphaFold Q6ZQF7
Predicted Effect probably null
Transcript: ENSMUST00000020655
AA Change: C314*
SMART Domains Protein: ENSMUSP00000020655
Gene: ENSMUSG00000020387
AA Change: C314*

DomainStartEndE-ValueType
Pfam:EPL1 39 177 3.4e-17 PFAM
PHD 201 247 1.35e-10 SMART
PHD 310 365 1.74e-4 SMART
Predicted Effect probably null
Transcript: ENSMUST00000109090
AA Change: C314*
SMART Domains Protein: ENSMUSP00000104718
Gene: ENSMUSG00000020387
AA Change: C314*

DomainStartEndE-ValueType
Pfam:EPL1 39 177 2e-17 PFAM
PHD 201 247 1.35e-10 SMART
PHD 310 365 1.74e-4 SMART
Predicted Effect probably null
Transcript: ENSMUST00000109091
AA Change: C314*
SMART Domains Protein: ENSMUSP00000104719
Gene: ENSMUSG00000020387
AA Change: C314*

DomainStartEndE-ValueType
Pfam:EPL1 2 176 9.6e-9 PFAM
PHD 201 247 1.35e-10 SMART
PHD 310 365 1.74e-4 SMART
Coding Region Coverage
  • 1x: 99.9%
  • 3x: 99.5%
  • 10x: 96.7%
  • 20x: 88.0%
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 66 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
1700010I14Rik T C 17: 9,214,084 (GRCm39) Y304H possibly damaging Het
Add2 A G 6: 86,075,655 (GRCm39) E268G probably damaging Het
Akr1b1 A C 6: 34,289,609 (GRCm39) V67G probably benign Het
Alms1 A T 6: 85,599,937 (GRCm39) N1588Y probably damaging Het
Arhgap23 A T 11: 97,366,965 (GRCm39) D1082V probably damaging Het
Asb6 A G 2: 30,714,207 (GRCm39) V301A probably benign Het
Ascc3 C T 10: 50,718,279 (GRCm39) R1991* probably null Het
Atg7 T A 6: 114,648,194 (GRCm39) C31S probably benign Het
Camsap2 A T 1: 136,208,176 (GRCm39) N1105K possibly damaging Het
Ccdc125 C T 13: 100,820,877 (GRCm39) probably null Het
Ccdc63 T C 5: 122,267,799 (GRCm39) I56V possibly damaging Het
Cpd T C 11: 76,681,714 (GRCm39) E1143G probably benign Het
Cpt1a T A 19: 3,421,556 (GRCm39) probably null Het
Creb3l2 A T 6: 37,311,369 (GRCm39) D473E probably benign Het
Crocc A T 4: 140,761,668 (GRCm39) probably null Het
Ctsd A T 7: 141,930,451 (GRCm39) C364S probably damaging Het
Disp2 G T 2: 118,620,275 (GRCm39) V336L probably benign Het
Efr3b A G 12: 4,017,106 (GRCm39) I782T possibly damaging Het
Fam98a A G 17: 75,846,427 (GRCm39) V230A probably damaging Het
Fat3 T A 9: 15,899,788 (GRCm39) T3082S probably benign Het
Frmd3 T C 4: 74,105,688 (GRCm39) Y445H probably damaging Het
Galt G A 4: 41,757,202 (GRCm39) R185Q probably benign Het
Gatb T C 3: 85,520,818 (GRCm39) I309T possibly damaging Het
Gfi1b G A 2: 28,503,820 (GRCm39) Q127* probably null Het
Gfpt1 C A 6: 87,063,302 (GRCm39) T563N probably damaging Het
Gria1 A G 11: 57,108,608 (GRCm39) D237G probably damaging Het
Hspbp1 A T 7: 4,666,465 (GRCm39) V305D probably benign Het
Hyls1 G A 9: 35,472,480 (GRCm39) S312F probably benign Het
Iars1 T C 13: 49,859,307 (GRCm39) V9A probably damaging Het
Ipo4 G A 14: 55,869,596 (GRCm39) P355S probably damaging Het
Kri1 T C 9: 21,186,565 (GRCm39) E597G probably benign Het
Mcub A G 3: 129,720,038 (GRCm39) Y152H probably damaging Het
Med23 C T 10: 24,779,646 (GRCm39) R542* probably null Het
Ndc80 T C 17: 71,818,483 (GRCm39) N291S probably benign Het
Nop2 T C 6: 125,110,529 (GRCm39) probably null Het
Nrxn1 T C 17: 90,896,218 (GRCm39) N984S probably damaging Het
Ntm A C 9: 28,920,671 (GRCm39) L86R probably damaging Het
Numa1 T A 7: 101,661,219 (GRCm39) D1847E possibly damaging Het
Odf2l A G 3: 144,845,624 (GRCm39) Q334R probably damaging Het
Or10ak11 A T 4: 118,687,588 (GRCm39) probably null Het
Or2ag2 C T 7: 106,485,134 (GRCm39) V297I possibly damaging Het
Or4a39 T A 2: 89,237,316 (GRCm39) T36S probably damaging Het
Or5ac17 T C 16: 59,036,296 (GRCm39) R227G probably benign Het
Or6ae1 A T 7: 139,742,722 (GRCm39) V47E possibly damaging Het
Or6c203 A G 10: 129,010,224 (GRCm39) V222A probably benign Het
Pacc1 A G 1: 191,073,037 (GRCm39) R153G probably benign Het
Pcdhb19 A T 18: 37,630,776 (GRCm39) K190N probably damaging Het
Pdik1l A G 4: 134,006,352 (GRCm39) F197L probably damaging Het
Rnf113a2 T C 12: 84,464,764 (GRCm39) F219L probably damaging Het
Rnf208 A C 2: 25,133,776 (GRCm39) T157P probably damaging Het
Scn8a A T 15: 100,881,865 (GRCm39) D644V probably damaging Het
Thbs3 T A 3: 89,125,401 (GRCm39) C204S probably damaging Het
Tlr3 A G 8: 45,851,565 (GRCm39) I444T probably damaging Het
Trpm8 A T 1: 88,282,191 (GRCm39) I696F possibly damaging Het
Ttn A T 2: 76,660,941 (GRCm39) V7422D possibly damaging Het
Ufl1 A G 4: 25,278,038 (GRCm39) V139A probably benign Het
Uggt2 A T 14: 119,308,238 (GRCm39) V381D probably benign Het
Vgll3 T A 16: 65,636,367 (GRCm39) Y173N probably damaging Het
Vmn1r9 A G 6: 57,048,158 (GRCm39) T78A probably benign Het
Vps13b T A 15: 35,472,114 (GRCm39) L806M probably damaging Het
Vps13d A C 4: 144,895,079 (GRCm39) H394Q probably benign Het
Wdr53 T A 16: 32,075,536 (GRCm39) V247D probably damaging Het
Wdr81 A T 11: 75,338,695 (GRCm39) L1488Q probably damaging Het
Zc3h6 A G 2: 128,809,732 (GRCm39) D3G possibly damaging Het
Zfp93 G T 7: 23,975,725 (GRCm39) C570F probably damaging Het
Zfp943 C T 17: 22,212,357 (GRCm39) T481I probably benign Het
Other mutations in Jade2
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01323:Jade2 APN 11 51,716,165 (GRCm39) missense possibly damaging 0.95
IGL01935:Jade2 APN 11 51,719,211 (GRCm39) missense possibly damaging 0.95
IGL02885:Jade2 APN 11 51,722,123 (GRCm39) missense probably damaging 1.00
IGL02987:Jade2 APN 11 51,721,308 (GRCm39) missense probably damaging 1.00
IGL02990:Jade2 APN 11 51,722,074 (GRCm39) splice site probably benign
IGL03172:Jade2 APN 11 51,716,198 (GRCm39) missense probably damaging 1.00
R0116:Jade2 UTSW 11 51,722,136 (GRCm39) missense probably damaging 1.00
R1917:Jade2 UTSW 11 51,709,365 (GRCm39) missense possibly damaging 0.95
R3410:Jade2 UTSW 11 51,708,050 (GRCm39) missense probably benign
R3886:Jade2 UTSW 11 51,721,326 (GRCm39) missense possibly damaging 0.79
R4846:Jade2 UTSW 11 51,711,975 (GRCm39) missense probably benign
R4916:Jade2 UTSW 11 51,707,909 (GRCm39) missense probably benign 0.01
R5420:Jade2 UTSW 11 51,709,434 (GRCm39) missense probably benign 0.21
R5446:Jade2 UTSW 11 51,707,786 (GRCm39) missense probably benign
R5657:Jade2 UTSW 11 51,707,814 (GRCm39) missense probably damaging 1.00
R6031:Jade2 UTSW 11 51,717,413 (GRCm39) nonsense probably null
R6116:Jade2 UTSW 11 51,726,460 (GRCm39) missense probably damaging 0.99
R7039:Jade2 UTSW 11 51,719,186 (GRCm39) missense probably damaging 0.97
R7270:Jade2 UTSW 11 51,708,011 (GRCm39) missense possibly damaging 0.89
R7702:Jade2 UTSW 11 51,707,744 (GRCm39) missense probably damaging 1.00
R7797:Jade2 UTSW 11 51,708,126 (GRCm39) missense probably benign 0.00
R8054:Jade2 UTSW 11 51,709,441 (GRCm39) missense probably benign 0.00
R8243:Jade2 UTSW 11 51,708,045 (GRCm39) missense probably benign
R8371:Jade2 UTSW 11 51,715,959 (GRCm39) missense probably benign 0.04
R8984:Jade2 UTSW 11 51,715,906 (GRCm39) missense probably damaging 1.00
R9020:Jade2 UTSW 11 51,708,454 (GRCm39) missense probably benign 0.00
R9135:Jade2 UTSW 11 51,715,951 (GRCm39) missense probably benign
R9143:Jade2 UTSW 11 51,715,930 (GRCm39) missense probably benign 0.00
Z1177:Jade2 UTSW 11 51,739,821 (GRCm39) missense probably null 0.20
Z1177:Jade2 UTSW 11 51,707,817 (GRCm39) missense probably damaging 0.96
Predicted Primers
Posted On 2017-06-26