Incidental Mutation 'R5988:Trpm1'
ID |
481818 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Trpm1
|
Ensembl Gene |
ENSMUSG00000030523 |
Gene Name |
transient receptor potential cation channel, subfamily M, member 1 |
Synonyms |
Mlsn1, melastatin, 4732499L03Rik, LTRPC1 |
MMRRC Submission |
044168-MU
|
Accession Numbers |
|
Essential gene? |
Non essential
(E-score: 0.000)
|
Stock # |
R5988 (G1)
|
Quality Score |
130.008 |
Status
|
Not validated
|
Chromosome |
7 |
Chromosomal Location |
63803583-63919523 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
T to A
at 63876553 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Serine to Arginine
at position 535
(S535R)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000146140
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000085222]
[ENSMUST00000177102]
[ENSMUST00000205348]
[ENSMUST00000205994]
[ENSMUST00000206263]
[ENSMUST00000206277]
[ENSMUST00000206314]
|
AlphaFold |
Q2TV84 |
Predicted Effect |
probably benign
Transcript: ENSMUST00000085222
AA Change: S651R
PolyPhen 2
Score 0.164 (Sensitivity: 0.92; Specificity: 0.87)
|
SMART Domains |
Protein: ENSMUSP00000082318 Gene: ENSMUSG00000030523 AA Change: S651R
Domain | Start | End | E-Value | Type |
low complexity region
|
8 |
28 |
N/A |
INTRINSIC |
low complexity region
|
183 |
195 |
N/A |
INTRINSIC |
low complexity region
|
289 |
307 |
N/A |
INTRINSIC |
low complexity region
|
456 |
491 |
N/A |
INTRINSIC |
Blast:ANK
|
505 |
533 |
1e-5 |
BLAST |
low complexity region
|
621 |
650 |
N/A |
INTRINSIC |
low complexity region
|
823 |
835 |
N/A |
INTRINSIC |
transmembrane domain
|
876 |
895 |
N/A |
INTRINSIC |
Pfam:Ion_trans
|
907 |
1120 |
6e-16 |
PFAM |
transmembrane domain
|
1150 |
1167 |
N/A |
INTRINSIC |
low complexity region
|
1216 |
1225 |
N/A |
INTRINSIC |
PDB:3E7K|H
|
1228 |
1279 |
1e-7 |
PDB |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000177102
|
SMART Domains |
Protein: ENSMUSP00000134947 Gene: ENSMUSG00000030523
Domain | Start | End | E-Value | Type |
low complexity region
|
67 |
79 |
N/A |
INTRINSIC |
low complexity region
|
173 |
191 |
N/A |
INTRINSIC |
low complexity region
|
340 |
375 |
N/A |
INTRINSIC |
Blast:ANK
|
389 |
417 |
1e-5 |
BLAST |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000205348
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000205434
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000205939
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000205994
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000206263
AA Change: S535R
PolyPhen 2
Score 0.164 (Sensitivity: 0.92; Specificity: 0.87)
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000206277
AA Change: S651R
PolyPhen 2
Score 0.161 (Sensitivity: 0.92; Specificity: 0.87)
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000206740
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000206314
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000206000
|
Coding Region Coverage |
- 1x: 99.8%
- 3x: 99.1%
- 10x: 95.3%
- 20x: 84.3%
|
Validation Efficiency |
|
MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a member of the transient receptor potential melastatin subfamily of transient receptor potential ion channels. The encoded protein is a calcium permeable cation channel that is expressed in melanocytes and may play a role in melanin synthesis. Specific mutations in this gene are the cause autosomal recessive complete congenital stationary night blindness-1C. The expression of this protein is inversely correlated with melanoma aggressiveness and as such it is used as a prognostic marker for melanoma metastasis. Alternate splicing results in multiple transcript variants. [provided by RefSeq, Oct 2011] PHENOTYPE: Homozygous mutants have defects in rod and cone electrophysiology affecting the photoresponses. [provided by MGI curators]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 104 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Actr8 |
T |
A |
14: 29,715,030 (GRCm39) |
M615K |
possibly damaging |
Het |
Acvr1c |
A |
T |
2: 58,205,886 (GRCm39) |
C25S |
probably damaging |
Het |
Adk |
A |
T |
14: 21,473,616 (GRCm39) |
E291V |
probably benign |
Het |
Ahnak |
C |
A |
19: 8,986,711 (GRCm39) |
|
probably benign |
Het |
Alg11 |
A |
G |
8: 22,552,044 (GRCm39) |
T63A |
probably benign |
Het |
Alox12 |
A |
T |
11: 70,142,413 (GRCm39) |
S272T |
probably benign |
Het |
Armc10 |
T |
A |
5: 21,865,581 (GRCm39) |
S195T |
probably damaging |
Het |
AW209491 |
C |
T |
13: 14,812,365 (GRCm39) |
A406V |
probably benign |
Het |
Baat |
G |
A |
4: 49,502,871 (GRCm39) |
P84S |
probably damaging |
Het |
BB014433 |
G |
A |
8: 15,091,854 (GRCm39) |
T333I |
probably damaging |
Het |
BC035947 |
G |
A |
1: 78,475,843 (GRCm39) |
R230* |
probably null |
Het |
Bcr |
G |
A |
10: 75,011,167 (GRCm39) |
G26E |
probably benign |
Het |
Ccdc88b |
T |
C |
19: 6,833,348 (GRCm39) |
E233G |
probably damaging |
Het |
Cep295 |
A |
G |
9: 15,252,770 (GRCm39) |
F353L |
probably damaging |
Het |
Chd8 |
T |
C |
14: 52,455,395 (GRCm39) |
M1031V |
probably damaging |
Het |
Col17a1 |
C |
G |
19: 47,642,659 (GRCm39) |
G885R |
probably damaging |
Het |
Cyp11a1 |
A |
C |
9: 57,928,117 (GRCm39) |
I214L |
probably benign |
Het |
Cyp3a44 |
A |
T |
5: 145,731,728 (GRCm39) |
S139R |
probably damaging |
Het |
Ddhd2 |
G |
A |
8: 26,238,589 (GRCm39) |
R64C |
probably damaging |
Het |
Dll3 |
A |
G |
7: 27,993,537 (GRCm39) |
W561R |
probably damaging |
Het |
Dnajc3 |
T |
C |
14: 119,195,376 (GRCm39) |
V97A |
possibly damaging |
Het |
Drosha |
C |
T |
15: 12,834,582 (GRCm39) |
|
probably benign |
Het |
E2f8 |
T |
C |
7: 48,524,743 (GRCm39) |
D302G |
probably damaging |
Het |
Ecd |
C |
G |
14: 20,374,629 (GRCm39) |
D504H |
probably damaging |
Het |
Eif1ad15 |
T |
A |
12: 88,288,202 (GRCm39) |
N17I |
unknown |
Het |
Eif4g2 |
C |
A |
7: 110,676,437 (GRCm39) |
V331L |
probably benign |
Het |
Fam124a |
T |
C |
14: 62,824,986 (GRCm39) |
I160T |
possibly damaging |
Het |
Fat1 |
A |
G |
8: 45,482,493 (GRCm39) |
T3051A |
probably benign |
Het |
Gm10271 |
A |
T |
10: 116,808,497 (GRCm39) |
F6L |
probably damaging |
Het |
Gm572 |
A |
G |
4: 148,752,964 (GRCm39) |
E281G |
possibly damaging |
Het |
Gm9944 |
T |
C |
4: 144,179,775 (GRCm39) |
|
probably benign |
Het |
Gstm5 |
A |
C |
3: 107,803,270 (GRCm39) |
M1L |
probably benign |
Het |
Havcr1 |
A |
G |
11: 46,646,964 (GRCm39) |
T133A |
probably damaging |
Het |
Hey1 |
T |
G |
3: 8,731,379 (GRCm39) |
S68R |
probably damaging |
Het |
Hsf2bp |
C |
T |
17: 32,230,149 (GRCm39) |
|
probably null |
Het |
Id2 |
T |
C |
12: 25,145,723 (GRCm39) |
N96S |
probably benign |
Het |
Ifi206 |
A |
C |
1: 173,308,906 (GRCm39) |
S363R |
possibly damaging |
Het |
Il21r |
T |
C |
7: 125,231,460 (GRCm39) |
F296S |
probably damaging |
Het |
Irgm2 |
A |
G |
11: 58,111,013 (GRCm39) |
T247A |
probably benign |
Het |
Irx5 |
T |
A |
8: 93,087,299 (GRCm39) |
Y410* |
probably null |
Het |
Kmt2c |
A |
G |
5: 25,516,118 (GRCm39) |
I2575T |
probably benign |
Het |
Lmbrd2 |
T |
A |
15: 9,182,493 (GRCm39) |
|
probably null |
Het |
Lrig1 |
A |
C |
6: 94,605,023 (GRCm39) |
S191A |
probably damaging |
Het |
Lrrc37 |
T |
C |
11: 103,506,722 (GRCm39) |
|
probably benign |
Het |
Lypd6b |
T |
A |
2: 49,836,178 (GRCm39) |
C120S |
probably damaging |
Het |
Mpdz |
A |
G |
4: 81,202,812 (GRCm39) |
|
probably null |
Het |
Myh6 |
G |
T |
14: 55,202,851 (GRCm39) |
R23S |
probably damaging |
Het |
Nat8f6 |
C |
T |
6: 85,786,040 (GRCm39) |
M36I |
probably benign |
Het |
Nol8 |
T |
A |
13: 49,826,090 (GRCm39) |
M970K |
possibly damaging |
Het |
Nrxn2 |
T |
C |
19: 6,542,901 (GRCm39) |
F1042L |
possibly damaging |
Het |
Nup160 |
T |
C |
2: 90,519,553 (GRCm39) |
W277R |
probably damaging |
Het |
Ogfr |
A |
T |
2: 180,236,026 (GRCm39) |
T204S |
probably damaging |
Het |
Or10j5 |
T |
A |
1: 172,784,723 (GRCm39) |
Y120* |
probably null |
Het |
Or1ak2 |
A |
G |
2: 36,827,236 (GRCm39) |
Y35C |
probably damaging |
Het |
Or1p1 |
T |
C |
11: 74,179,679 (GRCm39) |
V69A |
probably benign |
Het |
Or2n1d |
T |
C |
17: 38,646,911 (GRCm39) |
F288L |
probably damaging |
Het |
Or52n2b |
A |
T |
7: 104,566,125 (GRCm39) |
V126E |
probably damaging |
Het |
Or8c20 |
T |
C |
9: 38,261,045 (GRCm39) |
V222A |
probably benign |
Het |
Pcdh15 |
A |
G |
10: 74,215,189 (GRCm39) |
I648V |
probably benign |
Het |
Pced1b |
T |
A |
15: 97,282,228 (GRCm39) |
V89E |
probably damaging |
Het |
Phax |
G |
T |
18: 56,708,564 (GRCm39) |
A43S |
probably benign |
Het |
Phf20 |
A |
G |
2: 156,149,250 (GRCm39) |
E976G |
probably damaging |
Het |
Plin4 |
T |
C |
17: 56,416,567 (GRCm39) |
T8A |
probably benign |
Het |
Plxna1 |
G |
A |
6: 89,334,522 (GRCm39) |
Q36* |
probably null |
Het |
Pold1 |
T |
C |
7: 44,190,004 (GRCm39) |
Y394C |
probably damaging |
Het |
Ppp1r26 |
T |
A |
2: 28,342,566 (GRCm39) |
V732E |
probably benign |
Het |
Pramel5 |
A |
T |
4: 143,999,716 (GRCm39) |
C124S |
possibly damaging |
Het |
Prorp |
T |
A |
12: 55,424,002 (GRCm39) |
M441K |
probably damaging |
Het |
Prr14l |
C |
A |
5: 32,988,195 (GRCm39) |
L433F |
probably damaging |
Het |
Ptpn14 |
A |
G |
1: 189,582,584 (GRCm39) |
Y477C |
probably damaging |
Het |
Rcl1 |
T |
A |
19: 29,099,167 (GRCm39) |
I154N |
probably damaging |
Het |
Rfpl4 |
T |
C |
7: 5,118,501 (GRCm39) |
Y23C |
probably damaging |
Het |
Rims1 |
T |
C |
1: 22,635,544 (GRCm39) |
K146E |
probably damaging |
Het |
Rims2 |
A |
T |
15: 39,155,577 (GRCm39) |
K126M |
probably damaging |
Het |
Rpusd4 |
T |
A |
9: 35,183,816 (GRCm39) |
|
probably null |
Het |
Scn7a |
C |
T |
2: 66,556,558 (GRCm39) |
W342* |
probably null |
Het |
Sh3pxd2a |
A |
G |
19: 47,353,077 (GRCm39) |
V128A |
probably benign |
Het |
Slc15a5 |
T |
C |
6: 138,020,529 (GRCm39) |
H268R |
probably benign |
Het |
Slc22a3 |
T |
C |
17: 12,652,782 (GRCm39) |
I321V |
possibly damaging |
Het |
Slc7a6os |
A |
G |
8: 106,928,965 (GRCm39) |
S231P |
probably benign |
Het |
Smad5 |
T |
C |
13: 56,883,798 (GRCm39) |
S395P |
probably damaging |
Het |
Sorbs3 |
G |
A |
14: 70,440,752 (GRCm39) |
T20I |
probably benign |
Het |
Spata9 |
A |
G |
13: 76,116,236 (GRCm39) |
I42V |
probably benign |
Het |
Srl |
C |
T |
16: 4,340,892 (GRCm39) |
C9Y |
unknown |
Het |
Sugp2 |
T |
C |
8: 70,695,875 (GRCm39) |
F283L |
probably benign |
Het |
Syne2 |
T |
C |
12: 75,976,191 (GRCm39) |
|
probably null |
Het |
Taar6 |
A |
G |
10: 23,861,154 (GRCm39) |
Y131H |
probably damaging |
Het |
Tango2 |
T |
C |
16: 18,120,554 (GRCm39) |
T137A |
probably damaging |
Het |
Tas2r106 |
T |
A |
6: 131,655,606 (GRCm39) |
I82L |
probably benign |
Het |
Tbc1d32 |
T |
C |
10: 55,964,433 (GRCm39) |
E922G |
probably damaging |
Het |
Tgfb2 |
G |
T |
1: 186,436,778 (GRCm39) |
P65Q |
probably benign |
Het |
Tjp2 |
T |
G |
19: 24,091,464 (GRCm39) |
I566L |
probably benign |
Het |
Tnrc6a |
T |
A |
7: 122,781,603 (GRCm39) |
N1424K |
probably damaging |
Het |
Trim7 |
A |
T |
11: 48,728,513 (GRCm39) |
M54L |
probably benign |
Het |
Tsc2 |
T |
A |
17: 24,839,740 (GRCm39) |
N417I |
probably damaging |
Het |
Ttn |
T |
C |
2: 76,800,132 (GRCm39) |
R359G |
probably benign |
Het |
Vim |
A |
G |
2: 13,587,296 (GRCm39) |
T458A |
probably benign |
Het |
Vps11 |
A |
T |
9: 44,265,221 (GRCm39) |
S612R |
probably benign |
Het |
Wdfy3 |
A |
G |
5: 102,032,004 (GRCm39) |
S2273P |
probably benign |
Het |
Wwox |
G |
T |
8: 115,433,081 (GRCm39) |
R249L |
probably benign |
Het |
Zbtb4 |
G |
T |
11: 69,669,790 (GRCm39) |
G838C |
probably damaging |
Het |
Zkscan3 |
A |
T |
13: 21,580,461 (GRCm39) |
C76S |
probably damaging |
Het |
Znrf3 |
C |
T |
11: 5,231,776 (GRCm39) |
C483Y |
probably damaging |
Het |
Zscan2 |
A |
G |
7: 80,525,947 (GRCm39) |
K556R |
possibly damaging |
Het |
|
Other mutations in Trpm1 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00093:Trpm1
|
APN |
7 |
63,893,198 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL00465:Trpm1
|
APN |
7 |
63,897,215 (GRCm39) |
missense |
possibly damaging |
0.94 |
IGL01118:Trpm1
|
APN |
7 |
63,885,572 (GRCm39) |
missense |
probably benign |
0.24 |
IGL01148:Trpm1
|
APN |
7 |
63,893,312 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01303:Trpm1
|
APN |
7 |
63,860,578 (GRCm39) |
critical splice acceptor site |
probably benign |
0.00 |
IGL01432:Trpm1
|
APN |
7 |
63,884,767 (GRCm39) |
missense |
probably benign |
0.18 |
IGL01433:Trpm1
|
APN |
7 |
63,854,276 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01506:Trpm1
|
APN |
7 |
63,893,329 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01626:Trpm1
|
APN |
7 |
63,918,637 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01640:Trpm1
|
APN |
7 |
63,876,645 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01899:Trpm1
|
APN |
7 |
63,884,742 (GRCm39) |
missense |
probably benign |
0.24 |
IGL01959:Trpm1
|
APN |
7 |
63,858,723 (GRCm39) |
missense |
possibly damaging |
0.81 |
IGL02210:Trpm1
|
APN |
7 |
63,860,613 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02268:Trpm1
|
APN |
7 |
63,867,362 (GRCm39) |
missense |
probably damaging |
0.96 |
IGL02331:Trpm1
|
APN |
7 |
63,884,800 (GRCm39) |
missense |
probably benign |
0.30 |
IGL02334:Trpm1
|
APN |
7 |
63,895,690 (GRCm39) |
critical splice acceptor site |
probably null |
|
IGL02407:Trpm1
|
APN |
7 |
63,868,869 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02425:Trpm1
|
APN |
7 |
63,890,175 (GRCm39) |
missense |
probably damaging |
0.96 |
IGL02485:Trpm1
|
APN |
7 |
63,918,862 (GRCm39) |
missense |
possibly damaging |
0.52 |
IGL02635:Trpm1
|
APN |
7 |
63,848,972 (GRCm39) |
missense |
probably benign |
0.00 |
IGL02640:Trpm1
|
APN |
7 |
63,868,881 (GRCm39) |
missense |
probably damaging |
0.97 |
IGL02827:Trpm1
|
APN |
7 |
63,868,908 (GRCm39) |
missense |
probably null |
1.00 |
PIT4458001:Trpm1
|
UTSW |
7 |
63,918,309 (GRCm39) |
missense |
possibly damaging |
0.94 |
PIT4544001:Trpm1
|
UTSW |
7 |
63,848,998 (GRCm39) |
intron |
probably benign |
|
R0012:Trpm1
|
UTSW |
7 |
63,918,339 (GRCm39) |
missense |
possibly damaging |
0.88 |
R0014:Trpm1
|
UTSW |
7 |
63,897,970 (GRCm39) |
missense |
probably damaging |
1.00 |
R0056:Trpm1
|
UTSW |
7 |
63,893,334 (GRCm39) |
missense |
probably damaging |
1.00 |
R0445:Trpm1
|
UTSW |
7 |
63,894,590 (GRCm39) |
unclassified |
probably benign |
|
R0463:Trpm1
|
UTSW |
7 |
63,870,002 (GRCm39) |
missense |
probably benign |
0.05 |
R0469:Trpm1
|
UTSW |
7 |
63,873,506 (GRCm39) |
missense |
probably damaging |
1.00 |
R0510:Trpm1
|
UTSW |
7 |
63,873,506 (GRCm39) |
missense |
probably damaging |
1.00 |
R1301:Trpm1
|
UTSW |
7 |
63,852,801 (GRCm39) |
splice site |
probably null |
|
R1397:Trpm1
|
UTSW |
7 |
63,867,406 (GRCm39) |
missense |
probably damaging |
1.00 |
R1588:Trpm1
|
UTSW |
7 |
63,873,565 (GRCm39) |
missense |
possibly damaging |
0.93 |
R1618:Trpm1
|
UTSW |
7 |
63,890,283 (GRCm39) |
missense |
probably damaging |
1.00 |
R1724:Trpm1
|
UTSW |
7 |
63,885,569 (GRCm39) |
nonsense |
probably null |
|
R1827:Trpm1
|
UTSW |
7 |
63,884,755 (GRCm39) |
missense |
probably damaging |
1.00 |
R1829:Trpm1
|
UTSW |
7 |
63,876,530 (GRCm39) |
missense |
probably damaging |
1.00 |
R1835:Trpm1
|
UTSW |
7 |
63,880,016 (GRCm39) |
missense |
probably damaging |
1.00 |
R1864:Trpm1
|
UTSW |
7 |
63,917,764 (GRCm39) |
missense |
probably damaging |
1.00 |
R1895:Trpm1
|
UTSW |
7 |
63,873,556 (GRCm39) |
missense |
probably damaging |
1.00 |
R1946:Trpm1
|
UTSW |
7 |
63,873,556 (GRCm39) |
missense |
probably damaging |
1.00 |
R1959:Trpm1
|
UTSW |
7 |
63,879,978 (GRCm39) |
missense |
probably damaging |
1.00 |
R1960:Trpm1
|
UTSW |
7 |
63,879,978 (GRCm39) |
missense |
probably damaging |
1.00 |
R1980:Trpm1
|
UTSW |
7 |
63,858,182 (GRCm39) |
missense |
possibly damaging |
0.83 |
R1989:Trpm1
|
UTSW |
7 |
63,858,780 (GRCm39) |
intron |
probably null |
|
R2054:Trpm1
|
UTSW |
7 |
63,890,303 (GRCm39) |
missense |
possibly damaging |
0.69 |
R2156:Trpm1
|
UTSW |
7 |
63,884,736 (GRCm39) |
missense |
probably damaging |
1.00 |
R2251:Trpm1
|
UTSW |
7 |
63,859,724 (GRCm39) |
missense |
probably damaging |
1.00 |
R3051:Trpm1
|
UTSW |
7 |
63,918,849 (GRCm39) |
missense |
probably damaging |
1.00 |
R3148:Trpm1
|
UTSW |
7 |
63,884,760 (GRCm39) |
missense |
probably benign |
0.00 |
R3195:Trpm1
|
UTSW |
7 |
63,849,061 (GRCm39) |
nonsense |
probably null |
|
R3615:Trpm1
|
UTSW |
7 |
63,893,318 (GRCm39) |
missense |
probably damaging |
1.00 |
R3616:Trpm1
|
UTSW |
7 |
63,893,318 (GRCm39) |
missense |
probably damaging |
1.00 |
R3623:Trpm1
|
UTSW |
7 |
63,894,601 (GRCm39) |
missense |
probably damaging |
1.00 |
R3624:Trpm1
|
UTSW |
7 |
63,894,601 (GRCm39) |
missense |
probably damaging |
1.00 |
R3721:Trpm1
|
UTSW |
7 |
63,867,475 (GRCm39) |
intron |
probably benign |
|
R3822:Trpm1
|
UTSW |
7 |
63,867,451 (GRCm39) |
intron |
probably benign |
|
R4441:Trpm1
|
UTSW |
7 |
63,851,666 (GRCm39) |
missense |
probably damaging |
1.00 |
R4490:Trpm1
|
UTSW |
7 |
63,858,660 (GRCm39) |
nonsense |
probably null |
|
R4666:Trpm1
|
UTSW |
7 |
63,852,782 (GRCm39) |
missense |
probably damaging |
1.00 |
R4701:Trpm1
|
UTSW |
7 |
63,893,248 (GRCm39) |
missense |
probably damaging |
1.00 |
R4781:Trpm1
|
UTSW |
7 |
63,884,800 (GRCm39) |
missense |
probably benign |
0.30 |
R4811:Trpm1
|
UTSW |
7 |
63,858,054 (GRCm39) |
missense |
probably damaging |
1.00 |
R5017:Trpm1
|
UTSW |
7 |
63,894,580 (GRCm39) |
unclassified |
probably benign |
|
R5030:Trpm1
|
UTSW |
7 |
63,885,579 (GRCm39) |
missense |
probably damaging |
1.00 |
R5195:Trpm1
|
UTSW |
7 |
63,887,441 (GRCm39) |
missense |
possibly damaging |
0.84 |
R5238:Trpm1
|
UTSW |
7 |
63,918,702 (GRCm39) |
missense |
probably damaging |
1.00 |
R5304:Trpm1
|
UTSW |
7 |
63,858,694 (GRCm39) |
missense |
probably benign |
0.00 |
R5575:Trpm1
|
UTSW |
7 |
63,870,018 (GRCm39) |
missense |
possibly damaging |
0.95 |
R5613:Trpm1
|
UTSW |
7 |
63,858,159 (GRCm39) |
missense |
probably damaging |
1.00 |
R5855:Trpm1
|
UTSW |
7 |
63,918,710 (GRCm39) |
nonsense |
probably null |
|
R5947:Trpm1
|
UTSW |
7 |
63,873,547 (GRCm39) |
missense |
probably benign |
0.07 |
R6054:Trpm1
|
UTSW |
7 |
63,918,450 (GRCm39) |
missense |
probably benign |
0.00 |
R6088:Trpm1
|
UTSW |
7 |
63,917,724 (GRCm39) |
missense |
probably damaging |
0.98 |
R6259:Trpm1
|
UTSW |
7 |
63,918,226 (GRCm39) |
missense |
possibly damaging |
0.47 |
R6379:Trpm1
|
UTSW |
7 |
63,848,942 (GRCm39) |
missense |
probably benign |
0.00 |
R6380:Trpm1
|
UTSW |
7 |
63,918,045 (GRCm39) |
missense |
probably benign |
0.24 |
R6429:Trpm1
|
UTSW |
7 |
63,918,252 (GRCm39) |
missense |
probably benign |
0.00 |
R6600:Trpm1
|
UTSW |
7 |
63,803,781 (GRCm39) |
start codon destroyed |
probably null |
0.56 |
R6622:Trpm1
|
UTSW |
7 |
63,890,343 (GRCm39) |
missense |
probably damaging |
0.96 |
R6939:Trpm1
|
UTSW |
7 |
63,918,045 (GRCm39) |
missense |
probably benign |
0.03 |
R6944:Trpm1
|
UTSW |
7 |
63,893,181 (GRCm39) |
missense |
probably damaging |
1.00 |
R7025:Trpm1
|
UTSW |
7 |
63,876,462 (GRCm39) |
critical splice acceptor site |
probably null |
|
R7112:Trpm1
|
UTSW |
7 |
63,885,593 (GRCm39) |
missense |
probably damaging |
0.97 |
R7168:Trpm1
|
UTSW |
7 |
63,918,445 (GRCm39) |
missense |
probably benign |
0.01 |
R7219:Trpm1
|
UTSW |
7 |
63,854,333 (GRCm39) |
missense |
possibly damaging |
0.68 |
R7224:Trpm1
|
UTSW |
7 |
63,868,854 (GRCm39) |
critical splice acceptor site |
probably null |
|
R7285:Trpm1
|
UTSW |
7 |
63,859,729 (GRCm39) |
nonsense |
probably null |
|
R7367:Trpm1
|
UTSW |
7 |
63,918,549 (GRCm39) |
missense |
probably benign |
0.06 |
R7449:Trpm1
|
UTSW |
7 |
63,858,723 (GRCm39) |
missense |
probably benign |
0.14 |
R7466:Trpm1
|
UTSW |
7 |
63,890,330 (GRCm39) |
missense |
probably damaging |
0.99 |
R7498:Trpm1
|
UTSW |
7 |
63,858,657 (GRCm39) |
missense |
possibly damaging |
0.93 |
R7581:Trpm1
|
UTSW |
7 |
63,854,303 (GRCm39) |
missense |
probably benign |
0.00 |
R7776:Trpm1
|
UTSW |
7 |
63,897,939 (GRCm39) |
missense |
probably benign |
0.04 |
R8062:Trpm1
|
UTSW |
7 |
63,851,689 (GRCm39) |
missense |
probably benign |
0.18 |
R8069:Trpm1
|
UTSW |
7 |
63,858,718 (GRCm39) |
missense |
possibly damaging |
0.55 |
R8157:Trpm1
|
UTSW |
7 |
63,849,017 (GRCm39) |
missense |
probably damaging |
1.00 |
R8219:Trpm1
|
UTSW |
7 |
63,851,699 (GRCm39) |
missense |
probably benign |
0.35 |
R8258:Trpm1
|
UTSW |
7 |
63,918,777 (GRCm39) |
missense |
probably benign |
0.10 |
R8259:Trpm1
|
UTSW |
7 |
63,918,777 (GRCm39) |
missense |
probably benign |
0.10 |
R8320:Trpm1
|
UTSW |
7 |
63,918,541 (GRCm39) |
missense |
possibly damaging |
0.56 |
R8536:Trpm1
|
UTSW |
7 |
63,897,155 (GRCm39) |
missense |
probably damaging |
1.00 |
R8544:Trpm1
|
UTSW |
7 |
63,874,356 (GRCm39) |
splice site |
probably null |
|
R8813:Trpm1
|
UTSW |
7 |
63,851,756 (GRCm39) |
missense |
possibly damaging |
0.68 |
R8912:Trpm1
|
UTSW |
7 |
63,918,628 (GRCm39) |
missense |
probably benign |
0.06 |
R8954:Trpm1
|
UTSW |
7 |
63,858,089 (GRCm39) |
missense |
probably damaging |
0.98 |
R9139:Trpm1
|
UTSW |
7 |
63,848,943 (GRCm39) |
missense |
probably benign |
0.00 |
R9205:Trpm1
|
UTSW |
7 |
63,890,319 (GRCm39) |
missense |
possibly damaging |
0.66 |
R9258:Trpm1
|
UTSW |
7 |
63,884,713 (GRCm39) |
missense |
probably benign |
0.01 |
R9283:Trpm1
|
UTSW |
7 |
63,873,623 (GRCm39) |
missense |
probably benign |
0.18 |
R9394:Trpm1
|
UTSW |
7 |
63,918,480 (GRCm39) |
missense |
probably benign |
0.00 |
R9430:Trpm1
|
UTSW |
7 |
63,873,446 (GRCm39) |
missense |
probably benign |
0.38 |
R9537:Trpm1
|
UTSW |
7 |
63,803,616 (GRCm39) |
unclassified |
probably benign |
|
R9616:Trpm1
|
UTSW |
7 |
63,858,132 (GRCm39) |
missense |
probably damaging |
0.99 |
R9774:Trpm1
|
UTSW |
7 |
63,898,041 (GRCm39) |
missense |
possibly damaging |
0.90 |
X0026:Trpm1
|
UTSW |
7 |
63,918,658 (GRCm39) |
missense |
probably benign |
0.05 |
Z1176:Trpm1
|
UTSW |
7 |
63,854,342 (GRCm39) |
critical splice donor site |
probably null |
|
Z1176:Trpm1
|
UTSW |
7 |
63,852,879 (GRCm39) |
critical splice donor site |
probably null |
|
Z1177:Trpm1
|
UTSW |
7 |
63,867,439 (GRCm39) |
missense |
unknown |
|
|
Predicted Primers |
PCR Primer
(F):5'- GGCTTACAAAGTCTCTTAGCGC -3'
(R):5'- CACTTGGAATTGTTGTCCAGATCC -3'
Sequencing Primer
(F):5'- TTAGCGCTTCTGACCCGGAAG -3'
(R):5'- AGATCCTGGGAGATGTCATCCAC -3'
|
Posted On |
2017-06-26 |