Incidental Mutation 'R6103:Vmn2r52'
ID 485378
Institutional Source Beutler Lab
Gene Symbol Vmn2r52
Ensembl Gene ENSMUSG00000091930
Gene Name vomeronasal 2, receptor 52
Synonyms EG384534
MMRRC Submission 044253-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.082) question?
Stock # R6103 (G1)
Quality Score 225.009
Status Validated
Chromosome 7
Chromosomal Location 10158652-10176286 bp(-) (GRCm38)
Type of Mutation missense
DNA Base Change (assembly) G to A at 10171400 bp (GRCm38)
Zygosity Heterozygous
Amino Acid Change Proline to Serine at position 171 (P171S)
Ref Sequence ENSEMBL: ENSMUSP00000129352 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000164918]
AlphaFold L7N2B2
Predicted Effect probably benign
Transcript: ENSMUST00000164918
AA Change: P171S

PolyPhen 2 Score 0.361 (Sensitivity: 0.90; Specificity: 0.89)
SMART Domains Protein: ENSMUSP00000129352
Gene: ENSMUSG00000091930
AA Change: P171S

DomainStartEndE-ValueType
signal peptide 1 18 N/A INTRINSIC
Pfam:ANF_receptor 73 469 8.1e-29 PFAM
Pfam:NCD3G 512 565 1.5e-19 PFAM
Pfam:7tm_3 596 833 1.1e-55 PFAM
Coding Region Coverage
  • 1x: 99.9%
  • 3x: 99.6%
  • 10x: 98.1%
  • 20x: 95.0%
Validation Efficiency 100% (55/55)
Allele List at MGI
Other mutations in this stock
Total: 55 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abcc8 A G 7: 46,119,021 (GRCm38) S926P possibly damaging Het
Acacb T A 5: 114,245,881 (GRCm38) M2157K probably damaging Het
Aco2 T C 15: 81,913,251 (GRCm38) V636A probably benign Het
Adgrf3 T C 5: 30,196,267 (GRCm38) Y51C probably damaging Het
Adprhl1 T C 8: 13,222,055 (GRCm38) T1568A possibly damaging Het
Ank1 T A 8: 23,113,983 (GRCm38) S937T probably damaging Het
Ankrd50 T C 3: 38,454,429 (GRCm38) E340G probably damaging Het
Avpr1b C T 1: 131,609,417 (GRCm38) P90S probably damaging Het
Cacna2d3 T C 14: 29,396,489 (GRCm38) H159R probably damaging Het
Carmil3 A T 14: 55,505,427 (GRCm38) T1185S probably benign Het
Casp2 A T 6: 42,279,880 (GRCm38) R357S probably damaging Het
Ccdc34 A G 2: 110,018,007 (GRCm38) D47G probably benign Het
Cd109 A G 9: 78,698,314 (GRCm38) probably null Het
Cd209d T C 8: 3,878,304 (GRCm38) Y27C probably damaging Het
Cep350 T A 1: 155,924,576 (GRCm38) D1176V probably benign Het
Cpd A T 11: 76,799,799 (GRCm38) S844T probably benign Het
Cyp4x1 A G 4: 115,111,667 (GRCm38) L380P probably damaging Het
Dscam A G 16: 96,825,581 (GRCm38) V376A probably benign Het
Enam T A 5: 88,502,328 (GRCm38) N565K probably damaging Het
Fam110c G A 12: 31,074,795 (GRCm38) W252* probably null Het
Fbxo6 A T 4: 148,149,522 (GRCm38) I39N probably damaging Het
Fgb T C 3: 83,043,863 (GRCm38) D281G probably benign Het
Frem2 T A 3: 53,549,788 (GRCm38) T2048S probably benign Het
Fut8 A T 12: 77,331,947 (GRCm38) probably benign Het
Glmp T C 3: 88,328,031 (GRCm38) S238P probably benign Het
Gm35315 T A 5: 110,078,271 (GRCm38) Y434F probably damaging Het
Gnpnat1 A G 14: 45,383,399 (GRCm38) F71S probably damaging Het
Gpnmb A G 6: 49,042,886 (GRCm38) R64G possibly damaging Het
Grxcr1 T C 5: 68,166,204 (GRCm38) F275S possibly damaging Het
Ift140 T A 17: 25,093,126 (GRCm38) C1314S probably damaging Het
Kif9 T C 9: 110,489,849 (GRCm38) I127T possibly damaging Het
Mmd2 A G 5: 142,567,863 (GRCm38) probably null Het
Ms4a3 A T 19: 11,639,218 (GRCm38) V20D possibly damaging Het
Mtres1 A T 10: 43,532,920 (GRCm38) Y76N probably benign Het
Myh7b A G 2: 155,618,743 (GRCm38) E272G probably damaging Het
Naaladl1 G A 19: 6,108,713 (GRCm38) G292S probably damaging Het
Notch2 T A 3: 98,135,743 (GRCm38) Y1475N possibly damaging Het
Obp2a G A 2: 25,700,151 (GRCm38) E21K probably damaging Het
Or5ar1 A G 2: 85,841,432 (GRCm38) Y120H probably damaging Het
Osbpl10 T A 9: 115,061,872 (GRCm38) Y109* probably null Het
Plcd1 A T 9: 119,072,041 (GRCm38) W749R probably benign Het
Ptpro A G 6: 137,400,706 (GRCm38) E718G possibly damaging Het
Rbm4 C T 19: 4,787,919 (GRCm38) R295H probably damaging Het
Rsrc1 C T 3: 66,994,649 (GRCm38) P44L unknown Het
Setdb2 T C 14: 59,409,532 (GRCm38) probably null Het
Slc25a18 C A 6: 120,789,438 (GRCm38) L131I probably damaging Het
Slc4a10 A G 2: 62,234,465 (GRCm38) H221R probably damaging Het
Tbc1d32 A T 10: 56,150,883 (GRCm38) W757R probably damaging Het
Tmem183a C A 1: 134,348,146 (GRCm38) V331L probably benign Het
Try10 C A 6: 41,356,550 (GRCm38) H76Q probably damaging Het
Ttn T A 2: 76,918,255 (GRCm38) H4150L probably benign Het
Vmn2r88 A G 14: 51,415,369 (GRCm38) T450A probably benign Het
Yipf7 A T 5: 69,541,062 (GRCm38) V34D probably benign Het
Zfp647 G A 15: 76,912,085 (GRCm38) P125L probably damaging Het
Zg16 A G 7: 127,050,576 (GRCm38) V71A probably benign Het
Other mutations in Vmn2r52
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00088:Vmn2r52 APN 7 10,169,096 (GRCm38) missense probably benign 0.30
IGL00328:Vmn2r52 APN 7 10,171,417 (GRCm38) missense probably benign 0.12
IGL00980:Vmn2r52 APN 7 10,171,090 (GRCm38) missense probably damaging 1.00
IGL01468:Vmn2r52 APN 7 10,158,941 (GRCm38) missense probably damaging 1.00
IGL01660:Vmn2r52 APN 7 10,159,180 (GRCm38) missense probably damaging 0.97
IGL02215:Vmn2r52 APN 7 10,171,102 (GRCm38) missense probably damaging 0.97
IGL03030:Vmn2r52 APN 7 10,158,872 (GRCm38) missense probably benign 0.12
IGL03212:Vmn2r52 APN 7 10,159,547 (GRCm38) missense possibly damaging 0.47
FR4589:Vmn2r52 UTSW 7 10,159,020 (GRCm38) missense probably damaging 0.97
PIT4283001:Vmn2r52 UTSW 7 10,170,829 (GRCm38) missense possibly damaging 0.89
R0184:Vmn2r52 UTSW 7 10,159,338 (GRCm38) missense probably damaging 1.00
R0190:Vmn2r52 UTSW 7 10,171,388 (GRCm38) missense probably benign 0.00
R0240:Vmn2r52 UTSW 7 10,159,400 (GRCm38) missense probably damaging 0.99
R0240:Vmn2r52 UTSW 7 10,159,400 (GRCm38) missense probably damaging 0.99
R0257:Vmn2r52 UTSW 7 10,171,055 (GRCm38) nonsense probably null
R0310:Vmn2r52 UTSW 7 10,159,466 (GRCm38) missense probably damaging 1.00
R1831:Vmn2r52 UTSW 7 10,159,488 (GRCm38) missense probably damaging 1.00
R1862:Vmn2r52 UTSW 7 10,173,406 (GRCm38) missense possibly damaging 0.94
R2484:Vmn2r52 UTSW 7 10,169,131 (GRCm38) missense probably damaging 0.96
R2510:Vmn2r52 UTSW 7 10,170,868 (GRCm38) missense probably benign
R3625:Vmn2r52 UTSW 7 10,159,178 (GRCm38) missense probably damaging 1.00
R3803:Vmn2r52 UTSW 7 10,173,512 (GRCm38) missense probably damaging 1.00
R4013:Vmn2r52 UTSW 7 10,170,676 (GRCm38) missense probably benign 0.00
R4283:Vmn2r52 UTSW 7 10,170,638 (GRCm38) missense possibly damaging 0.60
R4324:Vmn2r52 UTSW 7 10,171,013 (GRCm38) missense possibly damaging 0.94
R4578:Vmn2r52 UTSW 7 10,170,690 (GRCm38) missense probably damaging 1.00
R4806:Vmn2r52 UTSW 7 10,159,242 (GRCm38) missense probably damaging 1.00
R5083:Vmn2r52 UTSW 7 10,159,465 (GRCm38) nonsense probably null
R5249:Vmn2r52 UTSW 7 10,176,270 (GRCm38) missense probably benign
R5306:Vmn2r52 UTSW 7 10,170,745 (GRCm38) missense possibly damaging 0.88
R5332:Vmn2r52 UTSW 7 10,169,125 (GRCm38) missense probably benign 0.17
R5617:Vmn2r52 UTSW 7 10,170,934 (GRCm38) missense probably damaging 0.99
R5643:Vmn2r52 UTSW 7 10,171,132 (GRCm38) missense probably damaging 1.00
R5749:Vmn2r52 UTSW 7 10,159,032 (GRCm38) missense probably damaging 1.00
R5763:Vmn2r52 UTSW 7 10,171,304 (GRCm38) missense probably benign 0.01
R6148:Vmn2r52 UTSW 7 10,171,163 (GRCm38) missense probably benign 0.00
R6356:Vmn2r52 UTSW 7 10,168,999 (GRCm38) missense probably benign 0.01
R6412:Vmn2r52 UTSW 7 10,171,009 (GRCm38) missense probably benign
R6657:Vmn2r52 UTSW 7 10,159,163 (GRCm38) missense probably damaging 0.99
R6997:Vmn2r52 UTSW 7 10,169,071 (GRCm38) missense probably benign 0.06
R7395:Vmn2r52 UTSW 7 10,170,817 (GRCm38) missense probably benign 0.00
R7621:Vmn2r52 UTSW 7 10,173,347 (GRCm38) missense probably benign 0.00
R7691:Vmn2r52 UTSW 7 10,159,182 (GRCm38) missense probably damaging 0.97
R7852:Vmn2r52 UTSW 7 10,158,968 (GRCm38) missense probably damaging 1.00
R7908:Vmn2r52 UTSW 7 10,162,950 (GRCm38) missense probably benign
R7909:Vmn2r52 UTSW 7 10,162,950 (GRCm38) missense probably benign
R7912:Vmn2r52 UTSW 7 10,162,950 (GRCm38) missense probably benign
R7913:Vmn2r52 UTSW 7 10,162,950 (GRCm38) missense probably benign
R7938:Vmn2r52 UTSW 7 10,159,373 (GRCm38) missense probably benign 0.12
R8884:Vmn2r52 UTSW 7 10,158,807 (GRCm38) missense probably damaging 1.00
R9003:Vmn2r52 UTSW 7 10,171,254 (GRCm38) missense probably benign 0.07
R9140:Vmn2r52 UTSW 7 10,158,716 (GRCm38) missense probably damaging 0.99
R9141:Vmn2r52 UTSW 7 10,171,404 (GRCm38) nonsense probably null
R9500:Vmn2r52 UTSW 7 10,171,354 (GRCm38) missense probably damaging 1.00
R9562:Vmn2r52 UTSW 7 10,159,549 (GRCm38) missense probably benign 0.22
R9564:Vmn2r52 UTSW 7 10,171,255 (GRCm38) missense probably benign 0.15
R9565:Vmn2r52 UTSW 7 10,159,549 (GRCm38) missense probably benign 0.22
R9597:Vmn2r52 UTSW 7 10,170,792 (GRCm38) nonsense probably null
R9743:Vmn2r52 UTSW 7 10,170,679 (GRCm38) missense possibly damaging 0.81
Z1176:Vmn2r52 UTSW 7 10,171,200 (GRCm38) missense probably damaging 0.97
Z1177:Vmn2r52 UTSW 7 10,169,190 (GRCm38) missense possibly damaging 0.93
Predicted Primers PCR Primer
(F):5'- GGCATATGTGAAAATGTGAGAGATTCC -3'
(R):5'- GTTAAGGAGCTAAGCTTTCAGTTAC -3'

Sequencing Primer
(F):5'- CAAAGGCAAAGCAAATTTCCTTG -3'
(R):5'- GGAGCTAAGCTTTCAGTTACTATTAG -3'
Posted On 2017-08-16