Incidental Mutation 'R6176:Slit1'
ID |
487796 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Slit1
|
Ensembl Gene |
ENSMUSG00000025020 |
Gene Name |
slit guidance ligand 1 |
Synonyms |
Slil1 |
MMRRC Submission |
044318-MU
|
Accession Numbers |
|
Essential gene? |
Non essential
(E-score: 0.000)
|
Stock # |
R6176 (G1)
|
Quality Score |
225.009 |
Status
|
Validated
|
Chromosome |
19 |
Chromosomal Location |
41588696-41732104 bp(-) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
T to C
at 41626034 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Lysine to Arginine
at position 576
(K576R)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000129034
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000025993]
[ENSMUST00000166496]
[ENSMUST00000169141]
|
AlphaFold |
Q80TR4 |
Predicted Effect |
probably damaging
Transcript: ENSMUST00000025993
AA Change: K576R
PolyPhen 2
Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
|
SMART Domains |
Protein: ENSMUSP00000025993 Gene: ENSMUSG00000025020 AA Change: K576R
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
32 |
N/A |
INTRINSIC |
LRRNT
|
33 |
65 |
5.68e-9 |
SMART |
LRR
|
59 |
83 |
4.58e1 |
SMART |
LRR
|
84 |
107 |
4.7e0 |
SMART |
LRR_TYP
|
108 |
131 |
1.95e-3 |
SMART |
LRR
|
133 |
155 |
6.05e0 |
SMART |
LRR
|
157 |
179 |
3.98e1 |
SMART |
LRR_TYP
|
180 |
203 |
3.44e-4 |
SMART |
LRRCT
|
215 |
264 |
3.51e-6 |
SMART |
LRRNT
|
281 |
313 |
3e-8 |
SMART |
LRR
|
307 |
331 |
6.41e1 |
SMART |
LRR_TYP
|
332 |
355 |
8.22e-2 |
SMART |
LRR_TYP
|
356 |
379 |
9.08e-4 |
SMART |
LRR
|
380 |
403 |
2.82e0 |
SMART |
LRR_TYP
|
404 |
427 |
5.42e-2 |
SMART |
LRRCT
|
439 |
488 |
5.78e-7 |
SMART |
LRRNT
|
512 |
544 |
1.04e-7 |
SMART |
LRR_TYP
|
564 |
587 |
3.39e-3 |
SMART |
LRR
|
589 |
611 |
2.08e1 |
SMART |
LRR_TYP
|
612 |
635 |
1.56e-2 |
SMART |
LRR_TYP
|
636 |
659 |
4.11e-2 |
SMART |
LRRCT
|
671 |
720 |
2.89e-7 |
SMART |
LRRNT
|
733 |
765 |
4.87e-8 |
SMART |
LRR
|
783 |
806 |
1.22e1 |
SMART |
LRR_TYP
|
807 |
830 |
9.73e-4 |
SMART |
LRR_TYP
|
831 |
854 |
9.58e-3 |
SMART |
LRRCT
|
866 |
915 |
5.6e-14 |
SMART |
EGF
|
928 |
962 |
5.08e-7 |
SMART |
EGF
|
967 |
1003 |
1.74e-5 |
SMART |
EGF_CA
|
1005 |
1041 |
1.05e-8 |
SMART |
EGF
|
1046 |
1081 |
1.21e-4 |
SMART |
EGF_CA
|
1083 |
1119 |
3.64e-8 |
SMART |
FOLN
|
1086 |
1108 |
8.44e0 |
SMART |
FOLN
|
1127 |
1149 |
1.4e0 |
SMART |
EGF
|
1127 |
1160 |
1.78e-2 |
SMART |
LamG
|
1183 |
1319 |
4.43e-38 |
SMART |
EGF
|
1338 |
1371 |
6.76e-3 |
SMART |
EGF
|
1377 |
1410 |
3.38e-3 |
SMART |
FOLN
|
1418 |
1440 |
2.25e1 |
SMART |
EGF
|
1418 |
1451 |
1.28e-3 |
SMART |
CT
|
1462 |
1531 |
3.15e-4 |
SMART |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000166496
AA Change: K576R
PolyPhen 2
Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
|
SMART Domains |
Protein: ENSMUSP00000128381 Gene: ENSMUSG00000025020 AA Change: K576R
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
32 |
N/A |
INTRINSIC |
LRRNT
|
33 |
65 |
5.68e-9 |
SMART |
LRR
|
59 |
83 |
4.58e1 |
SMART |
LRR
|
84 |
107 |
4.7e0 |
SMART |
LRR_TYP
|
108 |
131 |
1.95e-3 |
SMART |
LRR
|
133 |
155 |
6.05e0 |
SMART |
LRR
|
157 |
179 |
3.98e1 |
SMART |
LRR_TYP
|
180 |
203 |
3.44e-4 |
SMART |
LRRCT
|
215 |
264 |
3.51e-6 |
SMART |
LRRNT
|
281 |
313 |
3e-8 |
SMART |
LRR
|
307 |
331 |
6.41e1 |
SMART |
LRR_TYP
|
332 |
355 |
8.22e-2 |
SMART |
LRR_TYP
|
356 |
379 |
9.08e-4 |
SMART |
LRR
|
380 |
403 |
2.82e0 |
SMART |
LRR_TYP
|
404 |
427 |
5.42e-2 |
SMART |
LRRCT
|
439 |
488 |
5.78e-7 |
SMART |
LRRNT
|
512 |
544 |
1.04e-7 |
SMART |
LRR_TYP
|
564 |
587 |
3.39e-3 |
SMART |
LRR
|
589 |
611 |
2.08e1 |
SMART |
LRR_TYP
|
612 |
635 |
1.56e-2 |
SMART |
LRR_TYP
|
636 |
659 |
4.11e-2 |
SMART |
LRRCT
|
671 |
720 |
2.89e-7 |
SMART |
LRRNT
|
733 |
765 |
4.87e-8 |
SMART |
LRR
|
783 |
806 |
1.22e1 |
SMART |
LRR_TYP
|
807 |
830 |
9.73e-4 |
SMART |
LRR_TYP
|
831 |
854 |
9.58e-3 |
SMART |
LRRCT
|
866 |
915 |
5.6e-14 |
SMART |
EGF
|
928 |
962 |
5.08e-7 |
SMART |
EGF
|
967 |
1003 |
1.74e-5 |
SMART |
EGF_CA
|
1005 |
1041 |
1.05e-8 |
SMART |
EGF
|
1046 |
1081 |
1.21e-4 |
SMART |
EGF_CA
|
1083 |
1119 |
3.64e-8 |
SMART |
FOLN
|
1086 |
1108 |
8.44e0 |
SMART |
FOLN
|
1127 |
1149 |
1.4e0 |
SMART |
EGF
|
1127 |
1160 |
1.78e-2 |
SMART |
LamG
|
1183 |
1319 |
4.43e-38 |
SMART |
EGF
|
1338 |
1371 |
6.76e-3 |
SMART |
EGF
|
1377 |
1410 |
3.38e-3 |
SMART |
low complexity region
|
1437 |
1458 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000169141
AA Change: K576R
PolyPhen 2
Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
|
SMART Domains |
Protein: ENSMUSP00000129034 Gene: ENSMUSG00000025020 AA Change: K576R
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
32 |
N/A |
INTRINSIC |
LRRNT
|
33 |
65 |
5.68e-9 |
SMART |
LRR
|
59 |
83 |
4.58e1 |
SMART |
LRR
|
84 |
107 |
4.7e0 |
SMART |
LRR_TYP
|
108 |
131 |
1.95e-3 |
SMART |
LRR
|
133 |
155 |
6.05e0 |
SMART |
LRR
|
157 |
179 |
3.98e1 |
SMART |
LRR_TYP
|
180 |
203 |
3.44e-4 |
SMART |
LRRCT
|
215 |
264 |
3.51e-6 |
SMART |
LRRNT
|
281 |
313 |
3e-8 |
SMART |
LRR
|
307 |
331 |
6.41e1 |
SMART |
LRR_TYP
|
332 |
355 |
8.22e-2 |
SMART |
LRR_TYP
|
356 |
379 |
9.08e-4 |
SMART |
LRR
|
380 |
403 |
2.82e0 |
SMART |
LRR_TYP
|
404 |
427 |
5.42e-2 |
SMART |
LRRCT
|
439 |
488 |
5.78e-7 |
SMART |
LRRNT
|
512 |
544 |
1.04e-7 |
SMART |
LRR_TYP
|
564 |
587 |
3.39e-3 |
SMART |
LRR
|
589 |
611 |
2.08e1 |
SMART |
LRR_TYP
|
612 |
635 |
1.56e-2 |
SMART |
LRR_TYP
|
636 |
659 |
4.11e-2 |
SMART |
LRRCT
|
671 |
720 |
2.89e-7 |
SMART |
LRRNT
|
733 |
765 |
4.87e-8 |
SMART |
LRR
|
783 |
806 |
1.22e1 |
SMART |
LRR_TYP
|
807 |
830 |
9.73e-4 |
SMART |
LRR_TYP
|
831 |
854 |
9.58e-3 |
SMART |
LRRCT
|
866 |
915 |
5.6e-14 |
SMART |
EGF
|
928 |
962 |
5.08e-7 |
SMART |
EGF
|
967 |
1003 |
1.74e-5 |
SMART |
EGF_CA
|
1005 |
1041 |
1.05e-8 |
SMART |
EGF
|
1046 |
1081 |
1.21e-4 |
SMART |
EGF_CA
|
1083 |
1119 |
3.64e-8 |
SMART |
FOLN
|
1086 |
1108 |
8.44e0 |
SMART |
FOLN
|
1127 |
1149 |
1.4e0 |
SMART |
EGF
|
1127 |
1160 |
1.78e-2 |
SMART |
LamG
|
1183 |
1319 |
4.43e-38 |
SMART |
EGF
|
1338 |
1371 |
6.76e-3 |
SMART |
EGF
|
1377 |
1410 |
3.38e-3 |
SMART |
FOLN
|
1418 |
1440 |
2.25e1 |
SMART |
EGF
|
1418 |
1451 |
1.28e-3 |
SMART |
|
Coding Region Coverage |
- 1x: 99.9%
- 3x: 99.6%
- 10x: 98.2%
- 20x: 94.9%
|
Validation Efficiency |
97% (60/62) |
MGI Phenotype |
PHENOTYPE: Mice homozygous for a reporter allele exhibit normal interneuron numbers and morphology. [provided by MGI curators]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 64 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Akna |
T |
C |
4: 63,295,969 (GRCm39) |
Q966R |
probably benign |
Het |
Amn |
A |
G |
12: 111,240,590 (GRCm39) |
D74G |
possibly damaging |
Het |
Ank2 |
T |
A |
3: 126,739,120 (GRCm39) |
T2255S |
probably benign |
Het |
Ankfy1 |
G |
A |
11: 72,645,285 (GRCm39) |
C788Y |
probably benign |
Het |
Apaf1 |
A |
G |
10: 90,895,433 (GRCm39) |
|
probably null |
Het |
Asl |
T |
A |
5: 130,047,720 (GRCm39) |
H82L |
probably benign |
Het |
Atrn |
A |
G |
2: 130,788,011 (GRCm39) |
E271G |
probably benign |
Het |
B4galnt3 |
A |
G |
6: 120,201,125 (GRCm39) |
F184S |
probably damaging |
Het |
C1s2 |
T |
A |
6: 124,602,768 (GRCm39) |
H481L |
probably damaging |
Het |
Cav2 |
A |
G |
6: 17,286,918 (GRCm39) |
D58G |
possibly damaging |
Het |
Cc2d2a |
A |
T |
5: 43,866,455 (GRCm39) |
H755L |
probably benign |
Het |
Ccdc65 |
A |
G |
15: 98,606,433 (GRCm39) |
|
probably null |
Het |
Celsr3 |
A |
T |
9: 108,705,554 (GRCm39) |
Y679F |
probably damaging |
Het |
Cep135 |
A |
T |
5: 76,772,490 (GRCm39) |
Y625F |
probably benign |
Het |
Cfhr1 |
A |
G |
1: 139,478,654 (GRCm39) |
S58P |
probably damaging |
Het |
Clip4 |
T |
A |
17: 72,113,628 (GRCm39) |
C259* |
probably null |
Het |
Cyp2j12 |
T |
A |
4: 96,029,074 (GRCm39) |
Q69L |
probably damaging |
Het |
Dock3 |
G |
A |
9: 106,790,147 (GRCm39) |
T1484I |
probably benign |
Het |
Ecscr |
CCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCT |
CCTGCTGCTGCTGCTGCTGCTGCTGCTGCT |
18: 35,849,813 (GRCm39) |
|
probably benign |
Het |
Efcab3 |
A |
T |
11: 104,683,383 (GRCm39) |
I1604F |
probably benign |
Het |
Fam43b |
T |
C |
4: 138,122,522 (GRCm39) |
D266G |
probably damaging |
Het |
Fbxl13 |
T |
A |
5: 21,705,498 (GRCm39) |
I618F |
possibly damaging |
Het |
Gne |
C |
T |
4: 44,053,019 (GRCm39) |
|
probably benign |
Het |
Gnpat |
T |
A |
8: 125,605,593 (GRCm39) |
V321E |
probably damaging |
Het |
Gpatch8 |
G |
A |
11: 102,378,350 (GRCm39) |
A200V |
unknown |
Het |
Grid1 |
C |
A |
14: 35,284,504 (GRCm39) |
A749E |
probably benign |
Het |
Grip2 |
C |
T |
6: 91,756,832 (GRCm39) |
V540I |
probably benign |
Het |
Ice2 |
C |
T |
9: 69,324,354 (GRCm39) |
T759M |
probably damaging |
Het |
Jrk |
G |
T |
15: 74,578,189 (GRCm39) |
N365K |
possibly damaging |
Het |
Kank4 |
A |
G |
4: 98,653,791 (GRCm39) |
I879T |
probably damaging |
Het |
Krtap20-1 |
T |
A |
16: 88,812,288 (GRCm39) |
Y24* |
probably null |
Het |
Lao1 |
T |
A |
4: 118,819,197 (GRCm39) |
M1K |
probably null |
Het |
Mlf1 |
A |
G |
3: 67,291,927 (GRCm39) |
R31G |
probably damaging |
Het |
Nt5c3b |
T |
C |
11: 100,330,974 (GRCm39) |
|
probably benign |
Het |
Nusap1 |
A |
G |
2: 119,460,902 (GRCm39) |
R132G |
probably benign |
Het |
Or11g1 |
A |
G |
14: 50,651,847 (GRCm39) |
Y282C |
probably damaging |
Het |
Or1e16 |
AGCGGTCGTAGGC |
AGC |
11: 73,286,480 (GRCm39) |
|
probably null |
Het |
Or5w20 |
G |
A |
2: 87,727,280 (GRCm39) |
V254I |
probably benign |
Het |
Or8d2b |
A |
C |
9: 38,788,673 (GRCm39) |
D67A |
probably damaging |
Het |
Paqr9 |
G |
T |
9: 95,442,828 (GRCm39) |
V273L |
possibly damaging |
Het |
Pcdha9 |
A |
T |
18: 37,131,984 (GRCm39) |
D351V |
probably benign |
Het |
Pcdhga1 |
A |
G |
18: 37,797,282 (GRCm39) |
D762G |
probably benign |
Het |
Pde3a |
T |
A |
6: 141,444,615 (GRCm39) |
L1141Q |
possibly damaging |
Het |
Pga5 |
T |
A |
19: 10,649,149 (GRCm39) |
|
probably null |
Het |
Phldb3 |
C |
A |
7: 24,326,127 (GRCm39) |
R570S |
probably damaging |
Het |
Slc22a6 |
A |
C |
19: 8,599,161 (GRCm39) |
E264A |
probably damaging |
Het |
Slc49a4 |
C |
T |
16: 35,525,167 (GRCm39) |
M426I |
probably benign |
Het |
Sox21 |
T |
C |
14: 118,473,040 (GRCm39) |
K3R |
possibly damaging |
Het |
Stk32c |
A |
T |
7: 138,700,691 (GRCm39) |
D297E |
probably benign |
Het |
Suclg1 |
T |
C |
6: 73,252,326 (GRCm39) |
V323A |
probably damaging |
Het |
Tas1r2 |
T |
G |
4: 139,396,199 (GRCm39) |
C513G |
probably damaging |
Het |
Tbc1d23 |
A |
G |
16: 56,992,152 (GRCm39) |
Y603H |
probably damaging |
Het |
Tbc1d31 |
T |
C |
15: 57,816,192 (GRCm39) |
V642A |
probably damaging |
Het |
Tle2 |
A |
T |
10: 81,423,168 (GRCm39) |
D486V |
probably damaging |
Het |
Tmem232 |
A |
G |
17: 65,792,867 (GRCm39) |
I110T |
probably damaging |
Het |
Tmem39b |
A |
G |
4: 129,586,894 (GRCm39) |
Y106H |
probably damaging |
Het |
Trpm4 |
T |
G |
7: 44,976,100 (GRCm39) |
N229T |
probably damaging |
Het |
Tspo |
A |
G |
15: 83,458,007 (GRCm39) |
T120A |
probably benign |
Het |
Ttc28 |
G |
A |
5: 111,371,851 (GRCm39) |
A767T |
probably damaging |
Het |
Usp53 |
G |
A |
3: 122,727,652 (GRCm39) |
Q977* |
probably null |
Het |
Vmn1r215 |
T |
A |
13: 23,260,528 (GRCm39) |
D189E |
probably damaging |
Het |
Vmn2r12 |
T |
C |
5: 109,233,866 (GRCm39) |
Y782C |
probably benign |
Het |
Vmn2r54 |
A |
G |
7: 12,349,908 (GRCm39) |
L558P |
probably damaging |
Het |
Zfp268 |
T |
A |
4: 145,350,628 (GRCm39) |
C688* |
probably null |
Het |
|
Other mutations in Slit1 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00162:Slit1
|
APN |
19 |
41,639,274 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL00515:Slit1
|
APN |
19 |
41,612,940 (GRCm39) |
missense |
probably damaging |
0.97 |
IGL00909:Slit1
|
APN |
19 |
41,590,694 (GRCm39) |
missense |
possibly damaging |
0.89 |
IGL00953:Slit1
|
APN |
19 |
41,590,739 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01116:Slit1
|
APN |
19 |
41,594,824 (GRCm39) |
missense |
possibly damaging |
0.93 |
IGL01457:Slit1
|
APN |
19 |
41,599,483 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01688:Slit1
|
APN |
19 |
41,717,545 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01720:Slit1
|
APN |
19 |
41,622,653 (GRCm39) |
missense |
probably benign |
0.01 |
IGL01925:Slit1
|
APN |
19 |
41,596,817 (GRCm39) |
missense |
probably damaging |
0.98 |
IGL02008:Slit1
|
APN |
19 |
41,634,579 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL02312:Slit1
|
APN |
19 |
41,590,119 (GRCm39) |
missense |
possibly damaging |
0.66 |
IGL02398:Slit1
|
APN |
19 |
41,590,676 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02542:Slit1
|
APN |
19 |
41,615,687 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02559:Slit1
|
APN |
19 |
41,709,524 (GRCm39) |
missense |
probably benign |
0.01 |
IGL02609:Slit1
|
APN |
19 |
41,590,743 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL02623:Slit1
|
APN |
19 |
41,640,122 (GRCm39) |
missense |
probably damaging |
0.98 |
IGL02729:Slit1
|
APN |
19 |
41,591,773 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL03230:Slit1
|
APN |
19 |
41,717,524 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL03387:Slit1
|
APN |
19 |
41,591,881 (GRCm39) |
missense |
possibly damaging |
0.57 |
PIT4576001:Slit1
|
UTSW |
19 |
41,612,988 (GRCm39) |
missense |
possibly damaging |
0.52 |
R0366:Slit1
|
UTSW |
19 |
41,599,470 (GRCm39) |
missense |
probably damaging |
1.00 |
R0432:Slit1
|
UTSW |
19 |
41,731,732 (GRCm39) |
missense |
probably damaging |
0.98 |
R0496:Slit1
|
UTSW |
19 |
41,596,750 (GRCm39) |
splice site |
probably benign |
|
R0722:Slit1
|
UTSW |
19 |
41,596,874 (GRCm39) |
missense |
probably damaging |
1.00 |
R1468:Slit1
|
UTSW |
19 |
41,596,823 (GRCm39) |
missense |
probably damaging |
1.00 |
R1468:Slit1
|
UTSW |
19 |
41,596,823 (GRCm39) |
missense |
probably damaging |
1.00 |
R1488:Slit1
|
UTSW |
19 |
41,596,824 (GRCm39) |
missense |
probably damaging |
1.00 |
R1615:Slit1
|
UTSW |
19 |
41,639,110 (GRCm39) |
splice site |
probably benign |
|
R1694:Slit1
|
UTSW |
19 |
41,626,031 (GRCm39) |
missense |
possibly damaging |
0.69 |
R1762:Slit1
|
UTSW |
19 |
41,591,774 (GRCm39) |
missense |
probably damaging |
1.00 |
R1842:Slit1
|
UTSW |
19 |
41,709,477 (GRCm39) |
critical splice donor site |
probably null |
|
R1844:Slit1
|
UTSW |
19 |
41,614,012 (GRCm39) |
missense |
probably damaging |
1.00 |
R1940:Slit1
|
UTSW |
19 |
41,619,215 (GRCm39) |
missense |
probably damaging |
1.00 |
R2087:Slit1
|
UTSW |
19 |
41,625,922 (GRCm39) |
missense |
probably benign |
0.00 |
R2094:Slit1
|
UTSW |
19 |
41,594,819 (GRCm39) |
missense |
probably damaging |
0.99 |
R2095:Slit1
|
UTSW |
19 |
41,594,819 (GRCm39) |
missense |
probably damaging |
0.99 |
R2104:Slit1
|
UTSW |
19 |
41,590,686 (GRCm39) |
missense |
possibly damaging |
0.69 |
R2305:Slit1
|
UTSW |
19 |
41,599,455 (GRCm39) |
missense |
probably benign |
0.03 |
R2972:Slit1
|
UTSW |
19 |
41,599,455 (GRCm39) |
missense |
probably benign |
0.03 |
R2973:Slit1
|
UTSW |
19 |
41,599,455 (GRCm39) |
missense |
probably benign |
0.03 |
R2974:Slit1
|
UTSW |
19 |
41,599,455 (GRCm39) |
missense |
probably benign |
0.03 |
R3159:Slit1
|
UTSW |
19 |
41,592,812 (GRCm39) |
missense |
probably benign |
|
R3752:Slit1
|
UTSW |
19 |
41,635,406 (GRCm39) |
critical splice donor site |
probably null |
|
R4095:Slit1
|
UTSW |
19 |
41,596,925 (GRCm39) |
intron |
probably benign |
|
R4282:Slit1
|
UTSW |
19 |
41,602,856 (GRCm39) |
missense |
probably benign |
|
R4417:Slit1
|
UTSW |
19 |
41,602,908 (GRCm39) |
missense |
probably damaging |
1.00 |
R4607:Slit1
|
UTSW |
19 |
41,605,232 (GRCm39) |
missense |
probably benign |
0.10 |
R4729:Slit1
|
UTSW |
19 |
41,635,459 (GRCm39) |
missense |
probably damaging |
1.00 |
R4756:Slit1
|
UTSW |
19 |
41,637,452 (GRCm39) |
missense |
probably damaging |
1.00 |
R4764:Slit1
|
UTSW |
19 |
41,709,483 (GRCm39) |
nonsense |
probably null |
|
R4849:Slit1
|
UTSW |
19 |
41,637,983 (GRCm39) |
missense |
probably benign |
0.17 |
R4874:Slit1
|
UTSW |
19 |
41,717,493 (GRCm39) |
critical splice donor site |
probably null |
|
R5581:Slit1
|
UTSW |
19 |
41,605,102 (GRCm39) |
critical splice donor site |
probably null |
|
R5699:Slit1
|
UTSW |
19 |
41,613,959 (GRCm39) |
critical splice donor site |
probably null |
|
R5888:Slit1
|
UTSW |
19 |
41,731,735 (GRCm39) |
missense |
probably damaging |
1.00 |
R5906:Slit1
|
UTSW |
19 |
41,594,813 (GRCm39) |
missense |
probably damaging |
1.00 |
R6277:Slit1
|
UTSW |
19 |
41,588,948 (GRCm39) |
missense |
possibly damaging |
0.81 |
R6702:Slit1
|
UTSW |
19 |
41,603,309 (GRCm39) |
missense |
possibly damaging |
0.95 |
R6860:Slit1
|
UTSW |
19 |
41,605,154 (GRCm39) |
missense |
probably benign |
0.10 |
R7015:Slit1
|
UTSW |
19 |
41,618,325 (GRCm39) |
nonsense |
probably null |
|
R7172:Slit1
|
UTSW |
19 |
41,623,105 (GRCm39) |
missense |
probably damaging |
1.00 |
R7512:Slit1
|
UTSW |
19 |
41,589,074 (GRCm39) |
missense |
probably damaging |
1.00 |
R7568:Slit1
|
UTSW |
19 |
41,590,074 (GRCm39) |
missense |
probably damaging |
1.00 |
R7614:Slit1
|
UTSW |
19 |
41,622,639 (GRCm39) |
missense |
probably damaging |
1.00 |
R7650:Slit1
|
UTSW |
19 |
41,618,363 (GRCm39) |
missense |
probably damaging |
1.00 |
R7687:Slit1
|
UTSW |
19 |
41,639,128 (GRCm39) |
missense |
probably benign |
0.03 |
R7732:Slit1
|
UTSW |
19 |
41,592,847 (GRCm39) |
missense |
probably benign |
0.01 |
R7947:Slit1
|
UTSW |
19 |
41,599,248 (GRCm39) |
missense |
probably benign |
|
R7947:Slit1
|
UTSW |
19 |
41,599,247 (GRCm39) |
missense |
probably damaging |
1.00 |
R8171:Slit1
|
UTSW |
19 |
41,715,512 (GRCm39) |
missense |
probably damaging |
0.97 |
R8217:Slit1
|
UTSW |
19 |
41,612,959 (GRCm39) |
missense |
possibly damaging |
0.60 |
R8355:Slit1
|
UTSW |
19 |
41,634,473 (GRCm39) |
missense |
probably damaging |
1.00 |
R9025:Slit1
|
UTSW |
19 |
41,612,968 (GRCm39) |
missense |
probably benign |
0.01 |
R9124:Slit1
|
UTSW |
19 |
41,594,951 (GRCm39) |
missense |
probably benign |
0.02 |
R9288:Slit1
|
UTSW |
19 |
41,613,144 (GRCm39) |
intron |
probably benign |
|
R9343:Slit1
|
UTSW |
19 |
41,615,737 (GRCm39) |
missense |
probably damaging |
1.00 |
R9435:Slit1
|
UTSW |
19 |
41,591,764 (GRCm39) |
critical splice donor site |
probably null |
|
R9563:Slit1
|
UTSW |
19 |
41,596,874 (GRCm39) |
missense |
probably damaging |
1.00 |
R9564:Slit1
|
UTSW |
19 |
41,591,861 (GRCm39) |
missense |
probably benign |
0.16 |
R9595:Slit1
|
UTSW |
19 |
41,637,851 (GRCm39) |
missense |
probably damaging |
1.00 |
R9667:Slit1
|
UTSW |
19 |
41,731,832 (GRCm39) |
nonsense |
probably null |
|
X0023:Slit1
|
UTSW |
19 |
41,590,079 (GRCm39) |
missense |
probably benign |
|
|
Predicted Primers |
PCR Primer
(F):5'- GATTGATCCTCAGGGTTCCC -3'
(R):5'- AAATGTGAGTTTCCCACTGGTG -3'
Sequencing Primer
(F):5'- ACCCTCCTGCCAGTGAAG -3'
(R):5'- CACTGGTGGGAGGGTGC -3'
|
Posted On |
2017-10-10 |