Incidental Mutation 'R6181:Arhgef2'
ID |
488061 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Arhgef2
|
Ensembl Gene |
ENSMUSG00000028059 |
Gene Name |
Rho/Rac guanine nucleotide exchange factor 2 |
Synonyms |
Lfc, Lbcl1, LFP40, P40, GEFH1, GEF-H1 |
MMRRC Submission |
044323-MU
|
Accession Numbers |
|
Essential gene? |
Possibly essential
(E-score: 0.664)
|
Stock # |
R6181 (G1)
|
Quality Score |
225.009 |
Status
|
Not validated
|
Chromosome |
3 |
Chromosomal Location |
88513273-88555359 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
T to A
at 88542927 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Valine to Glutamic Acid
at position 358
(V358E)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000134840
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000029694]
[ENSMUST00000107510]
[ENSMUST00000170653]
[ENSMUST00000175745]
[ENSMUST00000175779]
[ENSMUST00000175903]
[ENSMUST00000175911]
[ENSMUST00000176500]
[ENSMUST00000176539]
[ENSMUST00000176243]
[ENSMUST00000176307]
[ENSMUST00000176316]
[ENSMUST00000176804]
[ENSMUST00000177303]
[ENSMUST00000177498]
[ENSMUST00000176879]
[ENSMUST00000177023]
|
AlphaFold |
Q60875 |
Predicted Effect |
probably damaging
Transcript: ENSMUST00000029694
AA Change: V375E
PolyPhen 2
Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
|
SMART Domains |
Protein: ENSMUSP00000029694 Gene: ENSMUSG00000028059 AA Change: V375E
Domain | Start | End | E-Value | Type |
C1
|
40 |
86 |
4.22e-9 |
SMART |
low complexity region
|
90 |
95 |
N/A |
INTRINSIC |
low complexity region
|
133 |
146 |
N/A |
INTRINSIC |
RhoGEF
|
240 |
432 |
1.86e-58 |
SMART |
PH
|
474 |
574 |
9.56e-11 |
SMART |
coiled coil region
|
588 |
619 |
N/A |
INTRINSIC |
low complexity region
|
812 |
827 |
N/A |
INTRINSIC |
coiled coil region
|
829 |
866 |
N/A |
INTRINSIC |
low complexity region
|
872 |
888 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000107510
AA Change: V348E
PolyPhen 2
Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
|
SMART Domains |
Protein: ENSMUSP00000103134 Gene: ENSMUSG00000028059 AA Change: V348E
Domain | Start | End | E-Value | Type |
C1
|
13 |
59 |
4.22e-9 |
SMART |
low complexity region
|
63 |
68 |
N/A |
INTRINSIC |
low complexity region
|
106 |
119 |
N/A |
INTRINSIC |
RhoGEF
|
213 |
405 |
1.86e-58 |
SMART |
PH
|
447 |
547 |
9.56e-11 |
SMART |
coiled coil region
|
561 |
592 |
N/A |
INTRINSIC |
low complexity region
|
785 |
800 |
N/A |
INTRINSIC |
coiled coil region
|
802 |
839 |
N/A |
INTRINSIC |
low complexity region
|
845 |
861 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000170653
AA Change: V346E
PolyPhen 2
Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
|
SMART Domains |
Protein: ENSMUSP00000127843 Gene: ENSMUSG00000028059 AA Change: V346E
Domain | Start | End | E-Value | Type |
C1
|
13 |
59 |
4.22e-9 |
SMART |
low complexity region
|
63 |
68 |
N/A |
INTRINSIC |
low complexity region
|
104 |
117 |
N/A |
INTRINSIC |
RhoGEF
|
211 |
403 |
1.86e-58 |
SMART |
PH
|
445 |
545 |
9.56e-11 |
SMART |
coiled coil region
|
559 |
590 |
N/A |
INTRINSIC |
low complexity region
|
783 |
798 |
N/A |
INTRINSIC |
coiled coil region
|
800 |
837 |
N/A |
INTRINSIC |
low complexity region
|
843 |
859 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000175745
|
SMART Domains |
Protein: ENSMUSP00000135044 Gene: ENSMUSG00000028059
Domain | Start | End | E-Value | Type |
C1
|
13 |
59 |
4.22e-9 |
SMART |
low complexity region
|
63 |
68 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000175779
AA Change: V360E
PolyPhen 2
Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)
|
SMART Domains |
Protein: ENSMUSP00000135177 Gene: ENSMUSG00000028059 AA Change: V360E
Domain | Start | End | E-Value | Type |
C1
|
25 |
71 |
4.22e-9 |
SMART |
low complexity region
|
75 |
80 |
N/A |
INTRINSIC |
low complexity region
|
118 |
131 |
N/A |
INTRINSIC |
RhoGEF
|
225 |
417 |
1.86e-58 |
SMART |
PH
|
459 |
559 |
9.56e-11 |
SMART |
coiled coil region
|
573 |
604 |
N/A |
INTRINSIC |
low complexity region
|
797 |
812 |
N/A |
INTRINSIC |
coiled coil region
|
814 |
851 |
N/A |
INTRINSIC |
low complexity region
|
857 |
873 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000175903
AA Change: V358E
PolyPhen 2
Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)
|
SMART Domains |
Protein: ENSMUSP00000135168 Gene: ENSMUSG00000028059 AA Change: V358E
Domain | Start | End | E-Value | Type |
C1
|
25 |
71 |
4.22e-9 |
SMART |
low complexity region
|
75 |
80 |
N/A |
INTRINSIC |
low complexity region
|
118 |
131 |
N/A |
INTRINSIC |
RhoGEF
|
223 |
415 |
1.86e-58 |
SMART |
PH
|
457 |
557 |
9.56e-11 |
SMART |
coiled coil region
|
571 |
602 |
N/A |
INTRINSIC |
low complexity region
|
795 |
810 |
N/A |
INTRINSIC |
coiled coil region
|
812 |
849 |
N/A |
INTRINSIC |
low complexity region
|
855 |
871 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000175911
AA Change: V367E
PolyPhen 2
Score 0.994 (Sensitivity: 0.69; Specificity: 0.97)
|
SMART Domains |
Protein: ENSMUSP00000135428 Gene: ENSMUSG00000028059 AA Change: V367E
Domain | Start | End | E-Value | Type |
C1
|
32 |
78 |
4.22e-9 |
SMART |
low complexity region
|
82 |
87 |
N/A |
INTRINSIC |
low complexity region
|
125 |
138 |
N/A |
INTRINSIC |
RhoGEF
|
232 |
424 |
1.86e-58 |
SMART |
PH
|
466 |
566 |
9.56e-11 |
SMART |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000176500
AA Change: V360E
PolyPhen 2
Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)
|
SMART Domains |
Protein: ENSMUSP00000134834 Gene: ENSMUSG00000028059 AA Change: V360E
Domain | Start | End | E-Value | Type |
C1
|
25 |
71 |
4.22e-9 |
SMART |
low complexity region
|
75 |
80 |
N/A |
INTRINSIC |
low complexity region
|
118 |
131 |
N/A |
INTRINSIC |
RhoGEF
|
225 |
417 |
1.86e-58 |
SMART |
PH
|
459 |
559 |
9.56e-11 |
SMART |
coiled coil region
|
573 |
604 |
N/A |
INTRINSIC |
low complexity region
|
797 |
812 |
N/A |
INTRINSIC |
coiled coil region
|
814 |
851 |
N/A |
INTRINSIC |
low complexity region
|
857 |
873 |
N/A |
INTRINSIC |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000176123
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000176301
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000176401
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000176528
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000176079
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000176400
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000176539
|
SMART Domains |
Protein: ENSMUSP00000135612 Gene: ENSMUSG00000028059
Domain | Start | End | E-Value | Type |
C1
|
25 |
71 |
4.22e-9 |
SMART |
low complexity region
|
75 |
80 |
N/A |
INTRINSIC |
low complexity region
|
118 |
131 |
N/A |
INTRINSIC |
Blast:RhoGEF
|
184 |
253 |
2e-28 |
BLAST |
PDB:4D0N|B
|
196 |
255 |
1e-17 |
PDB |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000176243
|
SMART Domains |
Protein: ENSMUSP00000135771 Gene: ENSMUSG00000028059
Domain | Start | End | E-Value | Type |
C1
|
13 |
59 |
4.22e-9 |
SMART |
low complexity region
|
63 |
68 |
N/A |
INTRINSIC |
low complexity region
|
104 |
117 |
N/A |
INTRINSIC |
Blast:RhoGEF
|
170 |
203 |
1e-14 |
BLAST |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000176307
|
SMART Domains |
Protein: ENSMUSP00000134843 Gene: ENSMUSG00000028059
Domain | Start | End | E-Value | Type |
C1
|
13 |
59 |
4.22e-9 |
SMART |
low complexity region
|
63 |
68 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000176316
|
SMART Domains |
Protein: ENSMUSP00000135808 Gene: ENSMUSG00000028059
Domain | Start | End | E-Value | Type |
C1
|
32 |
78 |
4.22e-9 |
SMART |
low complexity region
|
82 |
87 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000176804
AA Change: V373E
PolyPhen 2
Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)
|
SMART Domains |
Protein: ENSMUSP00000135397 Gene: ENSMUSG00000028059 AA Change: V373E
Domain | Start | End | E-Value | Type |
C1
|
40 |
86 |
4.22e-9 |
SMART |
low complexity region
|
90 |
95 |
N/A |
INTRINSIC |
low complexity region
|
133 |
146 |
N/A |
INTRINSIC |
RhoGEF
|
238 |
430 |
1.86e-58 |
SMART |
PH
|
472 |
572 |
9.56e-11 |
SMART |
coiled coil region
|
586 |
617 |
N/A |
INTRINSIC |
low complexity region
|
810 |
825 |
N/A |
INTRINSIC |
coiled coil region
|
827 |
864 |
N/A |
INTRINSIC |
low complexity region
|
870 |
886 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000177303
AA Change: V346E
PolyPhen 2
Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)
|
SMART Domains |
Protein: ENSMUSP00000135131 Gene: ENSMUSG00000028059 AA Change: V346E
Domain | Start | End | E-Value | Type |
C1
|
13 |
59 |
4.22e-9 |
SMART |
low complexity region
|
63 |
68 |
N/A |
INTRINSIC |
low complexity region
|
106 |
119 |
N/A |
INTRINSIC |
RhoGEF
|
211 |
403 |
1.86e-58 |
SMART |
PH
|
445 |
545 |
9.56e-11 |
SMART |
coiled coil region
|
559 |
590 |
N/A |
INTRINSIC |
low complexity region
|
783 |
798 |
N/A |
INTRINSIC |
coiled coil region
|
800 |
837 |
N/A |
INTRINSIC |
low complexity region
|
843 |
859 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000177498
AA Change: V358E
PolyPhen 2
Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
|
SMART Domains |
Protein: ENSMUSP00000134840 Gene: ENSMUSG00000028059 AA Change: V358E
Domain | Start | End | E-Value | Type |
C1
|
25 |
71 |
4.22e-9 |
SMART |
low complexity region
|
75 |
80 |
N/A |
INTRINSIC |
low complexity region
|
116 |
129 |
N/A |
INTRINSIC |
RhoGEF
|
223 |
415 |
1.86e-58 |
SMART |
PH
|
457 |
557 |
9.56e-11 |
SMART |
coiled coil region
|
571 |
602 |
N/A |
INTRINSIC |
low complexity region
|
795 |
810 |
N/A |
INTRINSIC |
coiled coil region
|
812 |
849 |
N/A |
INTRINSIC |
low complexity region
|
855 |
871 |
N/A |
INTRINSIC |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000177091
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000177120
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000177418
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000176879
|
SMART Domains |
Protein: ENSMUSP00000134766 Gene: ENSMUSG00000028059
Domain | Start | End | E-Value | Type |
C1
|
32 |
78 |
4.22e-9 |
SMART |
low complexity region
|
82 |
87 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000177023
|
SMART Domains |
Protein: ENSMUSP00000134859 Gene: ENSMUSG00000028059
Domain | Start | End | E-Value | Type |
C1
|
25 |
71 |
4.22e-9 |
SMART |
low complexity region
|
75 |
80 |
N/A |
INTRINSIC |
low complexity region
|
116 |
129 |
N/A |
INTRINSIC |
Blast:RhoGEF
|
182 |
208 |
5e-9 |
BLAST |
|
Coding Region Coverage |
- 1x: 99.9%
- 3x: 99.7%
- 10x: 98.4%
- 20x: 95.6%
|
Validation Efficiency |
|
MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] Rho GTPases play a fundamental role in numerous cellular processes that are initiated by extracellular stimuli that work through G protein coupled receptors. The encoded protein may form complex with G proteins and stimulate rho-dependent signals. Alternatively spliced transcript variants encoding different isoforms have been identified.[provided by RefSeq, Jun 2009] PHENOTYPE: Mice homozygous for a gene trap allele exhibit impaired response to viral infection. [provided by MGI curators]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 74 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Akr1b7 |
A |
G |
6: 34,392,313 (GRCm39) |
H42R |
possibly damaging |
Het |
Ankrd26 |
T |
A |
6: 118,525,838 (GRCm39) |
H369L |
probably benign |
Het |
Ano7 |
T |
C |
1: 93,323,081 (GRCm39) |
S474P |
probably damaging |
Het |
Aox3 |
T |
C |
1: 58,198,105 (GRCm39) |
V639A |
probably benign |
Het |
Brpf3 |
A |
G |
17: 29,029,555 (GRCm39) |
Y505C |
probably damaging |
Het |
Casd1 |
A |
G |
6: 4,619,331 (GRCm39) |
T120A |
probably damaging |
Het |
Ccdc121 |
A |
G |
5: 31,645,399 (GRCm39) |
E384G |
probably damaging |
Het |
Cd200l1 |
A |
G |
16: 45,238,260 (GRCm39) |
S185P |
probably benign |
Het |
Clasp1 |
T |
G |
1: 118,347,547 (GRCm39) |
S32A |
probably benign |
Het |
Clca3a2 |
A |
T |
3: 144,796,469 (GRCm39) |
L246* |
probably null |
Het |
Clcn7 |
A |
G |
17: 25,370,702 (GRCm39) |
I353V |
possibly damaging |
Het |
Cluap1 |
T |
A |
16: 3,751,608 (GRCm39) |
D322E |
probably benign |
Het |
Cmtm4 |
A |
C |
8: 105,082,997 (GRCm39) |
|
probably null |
Het |
Cntnap2 |
C |
T |
6: 46,736,742 (GRCm39) |
P723S |
probably damaging |
Het |
Col6a3 |
T |
A |
1: 90,744,096 (GRCm39) |
T84S |
possibly damaging |
Het |
Corin |
A |
G |
5: 72,529,439 (GRCm39) |
|
probably null |
Het |
Cubn |
G |
A |
2: 13,354,687 (GRCm39) |
T1903I |
probably benign |
Het |
Cyp27b1 |
A |
C |
10: 126,886,279 (GRCm39) |
D320A |
probably damaging |
Het |
Cyp2j6 |
G |
C |
4: 96,424,323 (GRCm39) |
L145V |
probably damaging |
Het |
Dennd2a |
T |
C |
6: 39,462,554 (GRCm39) |
K652R |
probably benign |
Het |
Dnah8 |
G |
A |
17: 30,967,542 (GRCm39) |
D2585N |
probably benign |
Het |
Dock1 |
T |
A |
7: 134,760,251 (GRCm39) |
M1638K |
probably damaging |
Het |
Efcab3 |
T |
C |
11: 104,722,159 (GRCm39) |
S1924P |
probably benign |
Het |
Eya1 |
T |
C |
1: 14,373,096 (GRCm39) |
S8G |
probably damaging |
Het |
Fam193a |
T |
A |
5: 34,600,884 (GRCm39) |
|
probably null |
Het |
Fbxw11 |
T |
A |
11: 32,692,575 (GRCm39) |
N515K |
probably benign |
Het |
Gm6408 |
T |
C |
5: 146,420,582 (GRCm39) |
V154A |
possibly damaging |
Het |
Guf1 |
A |
G |
5: 69,719,059 (GRCm39) |
Y235C |
probably damaging |
Het |
Hnrnpul2 |
C |
T |
19: 8,800,596 (GRCm39) |
S224L |
possibly damaging |
Het |
Igkv8-19 |
T |
A |
6: 70,317,968 (GRCm39) |
D86V |
probably damaging |
Het |
Iqcf1 |
A |
T |
9: 106,379,174 (GRCm39) |
D61V |
probably damaging |
Het |
Lrp5 |
T |
C |
19: 3,678,427 (GRCm39) |
D476G |
probably damaging |
Het |
Luzp1 |
A |
G |
4: 136,270,578 (GRCm39) |
T934A |
probably benign |
Het |
Mboat7 |
A |
T |
7: 3,686,884 (GRCm39) |
Y319N |
probably benign |
Het |
Mdn1 |
A |
G |
4: 32,715,953 (GRCm39) |
E2045G |
probably damaging |
Het |
Mfsd14b |
T |
C |
13: 65,260,398 (GRCm39) |
R12G |
probably benign |
Het |
Micall2 |
T |
A |
5: 139,702,506 (GRCm39) |
T246S |
probably benign |
Het |
Npepps |
A |
G |
11: 97,132,830 (GRCm39) |
V299A |
probably damaging |
Het |
Or2y11 |
T |
A |
11: 49,443,120 (GRCm39) |
V182D |
probably damaging |
Het |
P2ry13 |
A |
G |
3: 59,117,328 (GRCm39) |
V150A |
probably benign |
Het |
Pdc |
T |
C |
1: 150,209,021 (GRCm39) |
I168T |
probably damaging |
Het |
Pde8b |
C |
T |
13: 95,223,316 (GRCm39) |
E313K |
probably benign |
Het |
Pgap1 |
C |
T |
1: 54,551,936 (GRCm39) |
G499R |
probably benign |
Het |
Ppp1r15b |
T |
A |
1: 133,060,261 (GRCm39) |
C259* |
probably null |
Het |
Pramel21 |
T |
A |
4: 143,342,828 (GRCm39) |
|
probably null |
Het |
Ptgs1 |
A |
G |
2: 36,141,131 (GRCm39) |
E526G |
probably damaging |
Het |
Ptpn21 |
A |
G |
12: 98,666,258 (GRCm39) |
L271P |
probably damaging |
Het |
Rbm47 |
T |
C |
5: 66,183,833 (GRCm39) |
T257A |
possibly damaging |
Het |
Rfc3 |
C |
T |
5: 151,570,985 (GRCm39) |
D104N |
probably damaging |
Het |
Rhobtb3 |
A |
G |
13: 76,058,808 (GRCm39) |
I330T |
probably benign |
Het |
Rnf207 |
T |
C |
4: 152,393,305 (GRCm39) |
T570A |
probably benign |
Het |
Rusf1 |
A |
G |
7: 127,896,632 (GRCm39) |
|
probably null |
Het |
Sbpl |
T |
C |
17: 24,172,466 (GRCm39) |
H151R |
probably damaging |
Het |
Sstr3 |
T |
C |
15: 78,423,661 (GRCm39) |
D362G |
probably benign |
Het |
St7 |
T |
C |
6: 17,694,363 (GRCm39) |
|
probably null |
Het |
Tasor |
T |
A |
14: 27,194,235 (GRCm39) |
M1145K |
probably benign |
Het |
Tdrd6 |
A |
G |
17: 43,939,788 (GRCm39) |
V420A |
probably damaging |
Het |
Tet2 |
C |
A |
3: 133,193,520 (GRCm39) |
E305* |
probably null |
Het |
Tmem209 |
A |
T |
6: 30,505,970 (GRCm39) |
V68E |
probably damaging |
Het |
Tmod4 |
A |
T |
3: 95,035,118 (GRCm39) |
I208F |
probably damaging |
Het |
Tpo |
G |
A |
12: 30,181,884 (GRCm39) |
L4F |
probably benign |
Het |
Urb1 |
T |
C |
16: 90,575,982 (GRCm39) |
H858R |
probably benign |
Het |
Utrn |
A |
G |
10: 12,615,200 (GRCm39) |
W324R |
probably damaging |
Het |
V1rd19 |
T |
A |
7: 23,702,640 (GRCm39) |
F35L |
possibly damaging |
Het |
Vmn1r170 |
C |
A |
7: 23,305,692 (GRCm39) |
N31K |
probably damaging |
Het |
Vmn1r192 |
T |
A |
13: 22,371,452 (GRCm39) |
Y256F |
probably damaging |
Het |
Vmn2r124 |
T |
C |
17: 18,294,019 (GRCm39) |
I702T |
possibly damaging |
Het |
Vmn2r96 |
G |
A |
17: 18,804,126 (GRCm39) |
A459T |
probably benign |
Het |
Vwf |
G |
T |
6: 125,543,109 (GRCm39) |
A132S |
probably damaging |
Het |
Zfp202 |
G |
A |
9: 40,118,638 (GRCm39) |
G17E |
probably damaging |
Het |
Zfp608 |
A |
G |
18: 55,028,700 (GRCm39) |
S1238P |
possibly damaging |
Het |
Zfp804a |
G |
T |
2: 82,087,486 (GRCm39) |
M438I |
probably damaging |
Het |
Zgrf1 |
G |
A |
3: 127,381,590 (GRCm39) |
G246S |
probably damaging |
Het |
Zwint |
T |
C |
10: 72,492,431 (GRCm39) |
V115A |
probably benign |
Het |
|
Other mutations in Arhgef2 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL01913:Arhgef2
|
APN |
3 |
88,539,226 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02165:Arhgef2
|
APN |
3 |
88,553,527 (GRCm39) |
missense |
probably damaging |
1.00 |
monument
|
UTSW |
3 |
88,540,955 (GRCm39) |
critical splice donor site |
probably null |
|
R0090:Arhgef2
|
UTSW |
3 |
88,546,655 (GRCm39) |
missense |
probably damaging |
1.00 |
R0330:Arhgef2
|
UTSW |
3 |
88,549,808 (GRCm39) |
missense |
probably damaging |
1.00 |
R0414:Arhgef2
|
UTSW |
3 |
88,539,575 (GRCm39) |
splice site |
probably benign |
|
R0631:Arhgef2
|
UTSW |
3 |
88,541,743 (GRCm39) |
missense |
probably damaging |
0.99 |
R1635:Arhgef2
|
UTSW |
3 |
88,546,628 (GRCm39) |
critical splice acceptor site |
probably null |
|
R1688:Arhgef2
|
UTSW |
3 |
88,547,607 (GRCm39) |
missense |
probably benign |
0.32 |
R1751:Arhgef2
|
UTSW |
3 |
88,551,260 (GRCm39) |
missense |
probably damaging |
1.00 |
R1767:Arhgef2
|
UTSW |
3 |
88,551,260 (GRCm39) |
missense |
probably damaging |
1.00 |
R1836:Arhgef2
|
UTSW |
3 |
88,546,766 (GRCm39) |
missense |
probably damaging |
1.00 |
R1853:Arhgef2
|
UTSW |
3 |
88,540,222 (GRCm39) |
missense |
possibly damaging |
0.48 |
R1934:Arhgef2
|
UTSW |
3 |
88,537,098 (GRCm39) |
missense |
probably damaging |
0.96 |
R2155:Arhgef2
|
UTSW |
3 |
88,543,351 (GRCm39) |
missense |
probably damaging |
1.00 |
R2206:Arhgef2
|
UTSW |
3 |
88,537,221 (GRCm39) |
missense |
probably damaging |
1.00 |
R2360:Arhgef2
|
UTSW |
3 |
88,541,723 (GRCm39) |
missense |
probably damaging |
1.00 |
R3916:Arhgef2
|
UTSW |
3 |
88,540,340 (GRCm39) |
missense |
probably damaging |
1.00 |
R4090:Arhgef2
|
UTSW |
3 |
88,551,185 (GRCm39) |
missense |
probably benign |
0.01 |
R4732:Arhgef2
|
UTSW |
3 |
88,539,247 (GRCm39) |
nonsense |
probably null |
|
R4733:Arhgef2
|
UTSW |
3 |
88,539,247 (GRCm39) |
nonsense |
probably null |
|
R4837:Arhgef2
|
UTSW |
3 |
88,540,250 (GRCm39) |
missense |
probably damaging |
1.00 |
R4952:Arhgef2
|
UTSW |
3 |
88,549,769 (GRCm39) |
missense |
probably damaging |
1.00 |
R5152:Arhgef2
|
UTSW |
3 |
88,536,875 (GRCm39) |
splice site |
probably null |
|
R5194:Arhgef2
|
UTSW |
3 |
88,542,956 (GRCm39) |
missense |
probably damaging |
1.00 |
R5250:Arhgef2
|
UTSW |
3 |
88,540,955 (GRCm39) |
critical splice donor site |
probably null |
|
R5334:Arhgef2
|
UTSW |
3 |
88,553,636 (GRCm39) |
missense |
probably damaging |
0.96 |
R5514:Arhgef2
|
UTSW |
3 |
88,550,304 (GRCm39) |
missense |
probably benign |
0.01 |
R5560:Arhgef2
|
UTSW |
3 |
88,541,744 (GRCm39) |
missense |
probably damaging |
0.97 |
R5595:Arhgef2
|
UTSW |
3 |
88,550,283 (GRCm39) |
missense |
probably benign |
0.00 |
R5879:Arhgef2
|
UTSW |
3 |
88,550,924 (GRCm39) |
splice site |
probably null |
|
R5910:Arhgef2
|
UTSW |
3 |
88,542,327 (GRCm39) |
missense |
probably damaging |
1.00 |
R5914:Arhgef2
|
UTSW |
3 |
88,543,176 (GRCm39) |
missense |
probably benign |
|
R5918:Arhgef2
|
UTSW |
3 |
88,543,387 (GRCm39) |
missense |
probably damaging |
1.00 |
R6489:Arhgef2
|
UTSW |
3 |
88,550,321 (GRCm39) |
missense |
probably damaging |
1.00 |
R7167:Arhgef2
|
UTSW |
3 |
88,551,179 (GRCm39) |
missense |
possibly damaging |
0.56 |
R7289:Arhgef2
|
UTSW |
3 |
88,543,192 (GRCm39) |
missense |
probably benign |
|
R7318:Arhgef2
|
UTSW |
3 |
88,539,610 (GRCm39) |
missense |
probably damaging |
0.98 |
R7353:Arhgef2
|
UTSW |
3 |
88,542,993 (GRCm39) |
missense |
possibly damaging |
0.94 |
R7402:Arhgef2
|
UTSW |
3 |
88,540,873 (GRCm39) |
missense |
probably damaging |
1.00 |
R7441:Arhgef2
|
UTSW |
3 |
88,551,262 (GRCm39) |
missense |
probably damaging |
0.96 |
R7899:Arhgef2
|
UTSW |
3 |
88,528,569 (GRCm39) |
missense |
probably damaging |
1.00 |
R7934:Arhgef2
|
UTSW |
3 |
88,537,221 (GRCm39) |
missense |
probably damaging |
1.00 |
R8002:Arhgef2
|
UTSW |
3 |
88,554,117 (GRCm39) |
missense |
probably damaging |
1.00 |
R8254:Arhgef2
|
UTSW |
3 |
88,549,910 (GRCm39) |
missense |
probably damaging |
1.00 |
R8297:Arhgef2
|
UTSW |
3 |
88,546,739 (GRCm39) |
missense |
probably benign |
0.00 |
R8314:Arhgef2
|
UTSW |
3 |
88,528,600 (GRCm39) |
missense |
probably benign |
0.00 |
R8350:Arhgef2
|
UTSW |
3 |
88,553,527 (GRCm39) |
missense |
probably damaging |
1.00 |
R8450:Arhgef2
|
UTSW |
3 |
88,553,527 (GRCm39) |
missense |
probably damaging |
1.00 |
R8755:Arhgef2
|
UTSW |
3 |
88,536,850 (GRCm39) |
missense |
probably benign |
0.00 |
R9632:Arhgef2
|
UTSW |
3 |
88,528,576 (GRCm39) |
missense |
probably benign |
0.43 |
R9710:Arhgef2
|
UTSW |
3 |
88,528,576 (GRCm39) |
missense |
probably benign |
0.43 |
V1662:Arhgef2
|
UTSW |
3 |
88,540,636 (GRCm39) |
missense |
probably damaging |
1.00 |
|
Predicted Primers |
PCR Primer
(F):5'- TGCTCGTCACCACAGATCTG -3'
(R):5'- CTTCACTAGTCCTAGGGCTGAC -3'
Sequencing Primer
(F):5'- ACAGATCTGTGGCATTCTCTTAC -3'
(R):5'- TCCAGCATGAGAGAGAGTTCAACC -3'
|
Posted On |
2017-10-10 |