Mutagenetix > Incidental Mutation

Incidental Mutation 'R6184:Zfp599'

488148

Institutional Source

Beutler Lab

Gene Symbol

Zfp599

Ensembl Gene

ENSMUSG00000062794

Gene Name

zinc finger protein 599

Synonyms

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.069) question?

Stock #

R6184 (G1)

Quality Score

225.009

Status

Not validated

Chromosome

Chromosomal Location

22158726-22171191 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 22160947 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Tyrosine to Cysteine at position 406 (Y406C)

Ref Sequence

ENSEMBL: ENSMUSP00000083462 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000086281]

AlphaFold

E9PWP1

Predicted Effect

probably benign
Transcript: ENSMUST00000086281
AA Change: Y406C

PolyPhen 2 Score 0.180 (Sensitivity: 0.92; Specificity: 0.87)

SMART Domains

Protein: ENSMUSP00000083462
Gene: ENSMUSG00000062794
AA Change: Y406C

Domain	Start	End	E-Value	Type
KRAB	4	64	5.35e-33	SMART
ZnF_C2H2	228	250	5.59e-4	SMART
ZnF_C2H2	256	278	2.43e-4	SMART
ZnF_C2H2	284	306	1.69e-3	SMART
ZnF_C2H2	312	334	8.94e-3	SMART
ZnF_C2H2	340	362	8.47e-4	SMART
ZnF_C2H2	368	390	5.06e-2	SMART
ZnF_C2H2	396	418	7.9e-4	SMART
ZnF_C2H2	424	446	7.67e-2	SMART
ZnF_C2H2	452	474	1.64e-1	SMART
ZnF_C2H2	480	503	7.37e-4	SMART

Coding Region Coverage

1x: 99.9%
3x: 99.6%
10x: 98.2%
20x: 95.1%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 45 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
2410004P03Rik	A	G	12: 17,057,179 (GRCm39)	F106S	probably benign	Het
Adgrv1	A	T	13: 81,581,957 (GRCm39)	F4696I	probably benign	Het
Ank2	T	C	3: 126,756,047 (GRCm39)	I1073V	probably damaging	Het
Card11	A	T	5: 140,884,033 (GRCm39)	D415E	probably damaging	Het
Clec16a	G	A	16: 10,390,792 (GRCm39)		probably null	Het
Coro2a	T	C	4: 46,540,504 (GRCm39)	T472A	probably benign	Het
D130043K22Rik	T	A	13: 25,069,574 (GRCm39)	F878I	probably damaging	Het
D5Ertd579e	G	T	5: 36,787,127 (GRCm39)	D80E	probably damaging	Het
Ddrgk1	A	T	2: 130,506,481 (GRCm39)	V2E	possibly damaging	Het
Disp1	T	C	1: 182,867,896 (GRCm39)	H1508R	probably benign	Het
Dmtf1	T	C	5: 9,176,656 (GRCm39)	N344S	probably benign	Het
Eml5	A	G	12: 98,829,388 (GRCm39)	V503A	possibly damaging	Het
Fat1	A	G	8: 45,406,429 (GRCm39)	H1060R	probably benign	Het
Fbxw8	C	T	5: 118,251,814 (GRCm39)	R233Q	probably damaging	Het
Fer1l4	T	C	2: 155,890,211 (GRCm39)	K238R	probably damaging	Het
Flg	T	A	3: 93,187,357 (GRCm39)	S270T	probably benign	Het
Gm10801	TC	TCGCC	2: 98,494,151 (GRCm39)		probably benign	Het
Gm3604	A	T	13: 62,519,659 (GRCm39)	V32D	probably damaging	Het
Gnl2	T	G	4: 124,948,022 (GRCm39)		probably null	Het
Gpr162	A	G	6: 124,838,204 (GRCm39)	S149P	probably damaging	Het
Il2ra	T	A	2: 11,652,790 (GRCm39)		probably benign	Het
Kics2	T	C	10: 121,586,810 (GRCm39)	L375P	probably damaging	Het
Kmt5b	T	A	19: 3,854,499 (GRCm39)	M254K	probably damaging	Het
Lrriq3	T	C	3: 154,835,039 (GRCm39)	I258T	probably benign	Het
Mbnl1	T	C	3: 60,523,165 (GRCm39)	L328S	probably damaging	Het
Mboat2	A	G	12: 25,001,430 (GRCm39)	D277G	possibly damaging	Het
Mug2	A	G	6: 122,014,005 (GRCm39)	I364V	probably benign	Het
Myh7	G	A	14: 55,226,315 (GRCm39)	R442C	probably damaging	Het
Nin	A	G	12: 70,090,511 (GRCm39)	L968P	probably damaging	Het
Or1l8	T	C	2: 36,817,404 (GRCm39)	T241A	probably damaging	Het
Or5w14	A	T	2: 87,542,188 (GRCm39)	Y21N	probably benign	Het
Or8g53	T	G	9: 39,683,916 (GRCm39)	Y60S	probably damaging	Het
Per1	C	T	11: 68,993,730 (GRCm39)	P403S	probably damaging	Het
Ppip5k2	T	C	1: 97,661,730 (GRCm39)	I723V	possibly damaging	Het
Ptprg	A	G	14: 12,153,943 (GRCm38)	T555A	probably benign	Het
Rgsl1	C	T	1: 153,703,194 (GRCm39)	M187I	probably benign	Het
Sec31a	A	G	5: 100,517,453 (GRCm39)		probably null	Het
Sptbn5	C	T	2: 119,889,898 (GRCm39)		probably benign	Het
Sry	C	G	Y: 2,662,975 (GRCm39)	Q228H	unknown	Het
Stx1b	G	A	7: 127,407,077 (GRCm39)	T206I	possibly damaging	Het
Tsc22d4	T	A	5: 137,757,351 (GRCm39)	M35K	probably damaging	Het
Zc2hc1c	A	G	12: 85,343,218 (GRCm39)	K452E	probably damaging	Het
Zfp386	A	G	12: 116,024,133 (GRCm39)	N582S	possibly damaging	Het
Zfp457	A	G	13: 67,440,976 (GRCm39)	V437A	possibly damaging	Het
Zfyve26	G	A	12: 79,315,501 (GRCm39)	S1325F	probably damaging	Het

Other mutations in Zfp599

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00580:Zfp599	APN	9	22,160,768 (GRCm39)	missense	possibly damaging	0.94
IGL00845:Zfp599	APN	9	22,162,814 (GRCm39)	splice site	probably benign
R0136:Zfp599	UTSW	9	22,161,038 (GRCm39)	missense	probably benign	0.13
R0239:Zfp599	UTSW	9	22,161,055 (GRCm39)	missense	probably damaging	1.00
R0239:Zfp599	UTSW	9	22,161,055 (GRCm39)	missense	probably damaging	1.00
R0421:Zfp599	UTSW	9	22,161,843 (GRCm39)	splice site	probably benign
R1699:Zfp599	UTSW	9	22,161,700 (GRCm39)	missense	probably benign	0.20
R1723:Zfp599	UTSW	9	22,169,361 (GRCm39)	missense	probably damaging	1.00
R1899:Zfp599	UTSW	9	22,162,845 (GRCm39)	missense	probably benign	0.00
R4231:Zfp599	UTSW	9	22,161,041 (GRCm39)	nonsense	probably null
R4233:Zfp599	UTSW	9	22,161,041 (GRCm39)	nonsense	probably null
R4236:Zfp599	UTSW	9	22,161,041 (GRCm39)	nonsense	probably null
R4931:Zfp599	UTSW	9	22,169,419 (GRCm39)	missense	probably damaging	0.98
R5117:Zfp599	UTSW	9	22,161,396 (GRCm39)	nonsense	probably null
R5615:Zfp599	UTSW	9	22,165,165 (GRCm39)	missense	probably benign
R5759:Zfp599	UTSW	9	22,160,957 (GRCm39)	missense	probably damaging	1.00
R5915:Zfp599	UTSW	9	22,161,130 (GRCm39)	missense	probably damaging	1.00
R6188:Zfp599	UTSW	9	22,161,286 (GRCm39)	missense	probably damaging	1.00
R6657:Zfp599	UTSW	9	22,161,538 (GRCm39)	missense	probably damaging	1.00
R6736:Zfp599	UTSW	9	22,161,140 (GRCm39)	missense	probably damaging	1.00
R6752:Zfp599	UTSW	9	22,160,840 (GRCm39)	missense	probably damaging	1.00
R7071:Zfp599	UTSW	9	22,169,392 (GRCm39)	missense	probably benign	0.38
R7643:Zfp599	UTSW	9	22,161,188 (GRCm39)	missense	probably benign	0.19
R7714:Zfp599	UTSW	9	22,161,811 (GRCm39)	missense	probably benign	0.07
R7951:Zfp599	UTSW	9	22,160,764 (GRCm39)	missense	probably damaging	1.00
R7967:Zfp599	UTSW	9	22,160,830 (GRCm39)	missense	possibly damaging	0.66
R8014:Zfp599	UTSW	9	22,160,777 (GRCm39)	missense	probably benign	0.03
R8187:Zfp599	UTSW	9	22,161,111 (GRCm39)	nonsense	probably null
R9562:Zfp599	UTSW	9	22,160,999 (GRCm39)	missense	probably damaging	0.98
R9684:Zfp599	UTSW	9	22,160,824 (GRCm39)	missense	probably damaging	1.00
R9722:Zfp599	UTSW	9	22,160,741 (GRCm39)	missense	probably damaging	0.96
RF005:Zfp599	UTSW	9	22,165,180 (GRCm39)	missense	probably benign	0.03
RF024:Zfp599	UTSW	9	22,165,180 (GRCm39)	missense	probably benign	0.03

Predicted Primers

PCR Primer
(F):5'- ATACTTTGATGTCGAATGAGGTGTGAC -3'
(R):5'- TGCTCTCAGGGAAAACTTACTC -3'

Sequencing Primer
(F):5'- GGGAGAAAGCTTTCCCACAGTC -3'
(R):5'- CTGAATGTGGGAAAGCTTTCTACC -3'

Posted On

2017-10-10