Incidental Mutation 'R0525:Vmn1r86'
ID 48842
Institutional Source Beutler Lab
Gene Symbol Vmn1r86
Ensembl Gene ENSMUSG00000070816
Gene Name vomeronasal 1 receptor 86
Synonyms Gm10301
MMRRC Submission 038718-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.050) question?
Stock # R0525 (G1)
Quality Score 225
Status Validated
Chromosome 7
Chromosomal Location 12835924-12836874 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to C at 12836088 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Lysine to Glutamic Acid at position 213 (K213E)
Ref Sequence ENSEMBL: ENSMUSP00000154464 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000094828] [ENSMUST00000226604] [ENSMUST00000227220] [ENSMUST00000227700]
AlphaFold L7N213
Predicted Effect probably benign
Transcript: ENSMUST00000094828
AA Change: K263E

PolyPhen 2 Score 0.086 (Sensitivity: 0.93; Specificity: 0.85)
SMART Domains Protein: ENSMUSP00000092423
Gene: ENSMUSG00000070816
AA Change: K263E

DomainStartEndE-ValueType
Pfam:TAS2R 1 306 1.1e-14 PFAM
Pfam:V1R 35 301 4e-31 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000210729
Predicted Effect probably benign
Transcript: ENSMUST00000226604
AA Change: K263E

PolyPhen 2 Score 0.086 (Sensitivity: 0.93; Specificity: 0.85)
Predicted Effect probably benign
Transcript: ENSMUST00000227220
AA Change: K263E

PolyPhen 2 Score 0.086 (Sensitivity: 0.93; Specificity: 0.85)
Predicted Effect probably benign
Transcript: ENSMUST00000227700
AA Change: K213E

PolyPhen 2 Score 0.133 (Sensitivity: 0.92; Specificity: 0.86)
Meta Mutation Damage Score 0.0898 question?
Coding Region Coverage
  • 1x: 99.2%
  • 3x: 98.5%
  • 10x: 96.7%
  • 20x: 93.8%
Validation Efficiency 100% (72/72)
Allele List at MGI
Other mutations in this stock
Total: 69 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
4933440M02Rik T A 7: 124,930,671 (GRCm39) noncoding transcript Het
A930002H24Rik A G 17: 64,170,642 (GRCm39) W49R unknown Het
Abca13 G A 11: 9,243,371 (GRCm39) V1745M probably damaging Het
Abca16 T G 7: 120,065,033 (GRCm39) Y563* probably null Het
Acot12 C T 13: 91,908,186 (GRCm39) probably benign Het
Alms1 G A 6: 85,564,742 (GRCm39) A39T unknown Het
Arid5b T C 10: 67,933,676 (GRCm39) D742G possibly damaging Het
Atp1a4 G A 1: 172,067,255 (GRCm39) probably benign Het
AU021092 T A 16: 5,035,725 (GRCm39) E145V possibly damaging Het
Calr4 A T 4: 109,099,461 (GRCm39) probably benign Het
Clip4 T A 17: 72,106,093 (GRCm39) probably null Het
Cnpy4 A T 5: 138,190,878 (GRCm39) H180L probably benign Het
Cyp2j9 T C 4: 96,467,802 (GRCm39) probably null Het
Dgkq A G 5: 108,802,481 (GRCm39) S406P probably damaging Het
Dhx8 G A 11: 101,654,754 (GRCm39) C1014Y probably damaging Het
Dnah3 T C 7: 119,527,977 (GRCm39) Y3824C probably damaging Het
Donson A T 16: 91,483,133 (GRCm39) H69Q probably damaging Het
Dppa3 A G 6: 122,606,939 (GRCm39) E143G probably damaging Het
Drg1 A G 11: 3,212,545 (GRCm39) F96L probably damaging Het
Dvl1 A C 4: 155,940,052 (GRCm39) T395P probably damaging Het
Eftud2 A T 11: 102,730,079 (GRCm39) V897D probably damaging Het
Enpp6 A G 8: 47,535,478 (GRCm39) N341S possibly damaging Het
F11 A G 8: 45,706,086 (GRCm39) F100L probably benign Het
Fas T C 19: 34,296,727 (GRCm39) Y189H probably damaging Het
Galnt14 G T 17: 73,852,076 (GRCm39) S114R probably damaging Het
Gfpt2 A G 11: 49,720,602 (GRCm39) I528V probably benign Het
Glt6d1 A G 2: 25,684,280 (GRCm39) V242A possibly damaging Het
Grm1 A T 10: 10,594,953 (GRCm39) probably benign Het
Gskip G A 12: 105,665,224 (GRCm39) A88T probably damaging Het
Gtpbp1 A G 15: 79,597,648 (GRCm39) I348V probably benign Het
Hnrnpul1 C A 7: 25,440,308 (GRCm39) R316L possibly damaging Het
Il34 T C 8: 111,474,915 (GRCm39) E121G probably damaging Het
Lrr1 T C 12: 69,215,685 (GRCm39) L19P probably damaging Het
Mat2b A G 11: 40,573,496 (GRCm39) probably benign Het
Mettl21e T C 1: 44,245,542 (GRCm39) K235E probably damaging Het
Mir124-2hg T A 3: 17,839,693 (GRCm39) E126V possibly damaging Het
Myh15 A G 16: 48,952,414 (GRCm39) K828R probably benign Het
Myom3 A G 4: 135,492,237 (GRCm39) D127G possibly damaging Het
Nek5 C A 8: 22,569,093 (GRCm39) probably benign Het
Nudt7 A T 8: 114,878,392 (GRCm39) probably null Het
Or10ag56 A T 2: 87,139,693 (GRCm39) T187S probably benign Het
Or10d4c T G 9: 39,558,767 (GRCm39) C248W probably damaging Het
Or1j4 T C 2: 36,740,202 (GRCm39) L48P probably damaging Het
Or4a67 G A 2: 88,597,658 (GRCm39) Q334* probably null Het
Or8k23 C T 2: 86,186,619 (GRCm39) V36I probably benign Het
Phyhd1 A G 2: 30,171,040 (GRCm39) H241R probably damaging Het
Pmch T C 10: 87,927,262 (GRCm39) probably benign Het
Ror1 A G 4: 100,298,717 (GRCm39) S697G probably damaging Het
Rslcan18 A G 13: 67,260,322 (GRCm39) V25A probably benign Het
Sema6b T C 17: 56,433,630 (GRCm39) H426R probably damaging Het
Serpina3g T C 12: 104,204,598 (GRCm39) F9S probably damaging Het
Serpinb12 T A 1: 106,874,432 (GRCm39) H52Q probably benign Het
Sh3gl1 T C 17: 56,324,873 (GRCm39) K294R probably benign Het
Sidt1 G T 16: 44,079,809 (GRCm39) T615K possibly damaging Het
Slc16a4 A C 3: 107,205,255 (GRCm39) probably benign Het
Sned1 T A 1: 93,199,696 (GRCm39) probably null Het
Sp2 A T 11: 96,846,924 (GRCm39) probably benign Het
Steap1 T A 5: 5,792,903 (GRCm39) I3F possibly damaging Het
Stxbp5l A T 16: 36,950,159 (GRCm39) probably null Het
Tbc1d9 G T 8: 83,995,614 (GRCm39) V968F probably benign Het
Tnfrsf21 C T 17: 43,349,104 (GRCm39) H239Y probably benign Het
Triobp T C 15: 78,858,098 (GRCm39) L1233P possibly damaging Het
Trp53bp1 C A 2: 121,082,349 (GRCm39) A317S probably null Het
Trpc4ap A G 2: 155,482,398 (GRCm39) F531L possibly damaging Het
Ugt1a10 C T 1: 88,145,971 (GRCm39) P473L probably damaging Het
Vps8 G A 16: 21,358,859 (GRCm39) probably null Het
Wnk1 A T 6: 119,903,525 (GRCm39) S2563T probably damaging Het
Yrdc C G 4: 124,745,559 (GRCm39) R3G probably damaging Het
Zfp287 A T 11: 62,606,070 (GRCm39) V279E probably benign Het
Other mutations in Vmn1r86
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00492:Vmn1r86 APN 7 12,836,468 (GRCm39) missense possibly damaging 0.91
IGL01124:Vmn1r86 APN 7 12,836,856 (GRCm39) missense probably benign 0.04
IGL01291:Vmn1r86 APN 7 12,836,433 (GRCm39) missense probably benign 0.14
IGL02347:Vmn1r86 APN 7 12,836,574 (GRCm39) missense probably damaging 0.99
IGL02457:Vmn1r86 APN 7 12,836,707 (GRCm39) missense probably benign
IGL02983:Vmn1r86 APN 7 12,836,741 (GRCm39) missense probably damaging 1.00
ANU05:Vmn1r86 UTSW 7 12,836,433 (GRCm39) missense probably benign 0.14
R0304:Vmn1r86 UTSW 7 12,836,707 (GRCm39) missense probably benign
R1958:Vmn1r86 UTSW 7 12,836,621 (GRCm39) missense possibly damaging 0.94
R2227:Vmn1r86 UTSW 7 12,836,847 (GRCm39) missense probably benign 0.00
R3149:Vmn1r86 UTSW 7 12,836,358 (GRCm39) nonsense probably null
R3896:Vmn1r86 UTSW 7 12,836,093 (GRCm39) missense probably benign 0.18
R4735:Vmn1r86 UTSW 7 12,836,221 (GRCm39) missense probably damaging 1.00
R5219:Vmn1r86 UTSW 7 12,836,382 (GRCm39) missense probably damaging 1.00
R6003:Vmn1r86 UTSW 7 12,836,125 (GRCm39) nonsense probably null
R6457:Vmn1r86 UTSW 7 12,836,279 (GRCm39) missense possibly damaging 0.70
R7442:Vmn1r86 UTSW 7 12,835,983 (GRCm39) missense possibly damaging 0.70
R7622:Vmn1r86 UTSW 7 12,836,685 (GRCm39) missense probably benign 0.07
R8436:Vmn1r86 UTSW 7 12,836,771 (GRCm39) missense probably benign 0.25
R9141:Vmn1r86 UTSW 7 12,836,789 (GRCm39) nonsense probably null
R9374:Vmn1r86 UTSW 7 12,836,781 (GRCm39) missense possibly damaging 0.86
R9398:Vmn1r86 UTSW 7 12,836,261 (GRCm39) missense probably damaging 0.98
R9551:Vmn1r86 UTSW 7 12,836,781 (GRCm39) missense possibly damaging 0.86
R9552:Vmn1r86 UTSW 7 12,836,781 (GRCm39) missense possibly damaging 0.86
R9606:Vmn1r86 UTSW 7 12,836,741 (GRCm39) missense probably damaging 1.00
Predicted Primers PCR Primer
(F):5'- GCCAAGAAAGTGTGGGTTTCAGTTCAG -3'
(R):5'- TCTAAGCACGTTCCAAGTCATCACC -3'

Sequencing Primer
(F):5'- GTTCAGCCATGGAGTGAACT -3'
(R):5'- TCCCAGTAACTCTAAGTGGGC -3'
Posted On 2013-06-12