Mutagenetix > Incidental Mutation

Incidental Mutation 'R6170:Slc30a7'

490364

Institutional Source

Beutler Lab

Gene Symbol

Slc30a7

Ensembl Gene

ENSMUSG00000054414

Gene Name

solute carrier family 30 (zinc transporter), member 7

Synonyms

2610034N15Rik, 4833428C12Rik, 1810059J10Rik, ZnT-7, ZnT7

MMRRC Submission

044431-MU

Accession Numbers

Essential gene?

Possibly essential (E-score: 0.737) question?

Stock #

R6170 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

115938973-116007406 bp(-) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 115990743 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Phenylalanine to Serine at position 123 (F123S)

Ref Sequence

ENSEMBL: ENSMUSP00000065254 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000067485]

AlphaFold

Q9JKN1

Predicted Effect

probably damaging
Transcript: ENSMUST00000067485
AA Change: F123S

PolyPhen 2 Score 0.996 (Sensitivity: 0.55; Specificity: 0.98)

SMART Domains

Protein: ENSMUSP00000065254
Gene: ENSMUSG00000054414
AA Change: F123S

Domain	Start	End	E-Value	Type
Pfam:Cation_efflux	38	296	3.3e-46	PFAM

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000197333

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000197847

Meta Mutation Damage Score

0.5593

Coding Region Coverage

1x: 99.9%
3x: 99.6%
10x: 98.2%
20x: 94.8%

Validation Efficiency

96% (68/71)

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] Zinc functions as a cofactor for numerous enzymes, nuclear factors, and hormones and as an intra- and intercellular signal ion. Members of the zinc transporter (ZNT)/SLC30 subfamily of the cation diffusion facilitator family, such as SLC30A7, permit cellular efflux of zinc (Seve et al., 2004 [PubMed 15154973]).[supplied by OMIM, Mar 2008]
PHENOTYPE: Mice homozygous for a gene trapped allele exhibit a low body zinc status, reduced food intake and poor body weight gain, and are lean due to a significant reduction in body fat accumulation; however, no signs of hair growth abnormalities or dermatitis are observed. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 69 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
0610030E20Rik	T	A	6: 72,348,572 (GRCm38)	S90R	probably benign	Het
4930430A15Rik	A	G	2: 111,227,948 (GRCm38)	Y167H	probably benign	Het
4930523C07Rik	C	A	1: 160,075,173 (GRCm38)	N4K	possibly damaging	Het
5430419D17Rik	A	T	7: 131,174,487 (GRCm38)		probably null	Het
Adgrl2	A	G	3: 148,823,009 (GRCm38)	S1167P	probably damaging	Het
Akr1e1	T	C	13: 4,602,724 (GRCm38)	D94G	possibly damaging	Het
Anln	T	C	9: 22,368,497 (GRCm38)	N466D	probably benign	Het
Atp9b	T	A	18: 80,877,347 (GRCm38)	I231L	probably benign	Het
Bpifb3	T	A	2: 153,919,637 (GRCm38)	M2K	unknown	Het
Btbd3	T	C	2: 138,278,942 (GRCm38)	L12P	probably damaging	Het
Btnl6	T	A	17: 34,515,506 (GRCm38)	Y94F	probably damaging	Het
Cab39	T	A	1: 85,818,455 (GRCm38)	L19*	probably null	Het
Cacna2d2	A	G	9: 107,527,334 (GRCm38)	D1114G	probably damaging	Het
Cdh11	A	G	8: 102,634,810 (GRCm38)	V632A	probably benign	Het
Cemip	T	G	7: 83,947,230 (GRCm38)	T1109P	possibly damaging	Het
Col7a1	C	A	9: 108,966,443 (GRCm38)	P1522Q	unknown	Het
Colgalt1	C	T	8: 71,621,870 (GRCm38)	L409F	probably damaging	Het
Crtc2	A	G	3: 90,259,600 (GRCm38)	M125V	probably benign	Het
Cyp2b19	T	G	7: 26,759,094 (GRCm38)	M78R	possibly damaging	Het
Cyp4a12a	A	C	4: 115,327,446 (GRCm38)	D308A	possibly damaging	Het
D16Ertd472e	T	C	16: 78,545,267 (GRCm38)	T242A	probably benign	Het
Ddah1	A	G	3: 145,891,506 (GRCm38)	D166G	probably benign	Het
Dmtn	T	C	14: 70,617,355 (GRCm38)	D60G	probably damaging	Het
Dsg1a	A	T	18: 20,335,986 (GRCm38)	D607V	probably damaging	Het
Ebf1	T	A	11: 44,883,885 (GRCm38)	N236K	probably damaging	Het
Emc1	A	G	4: 139,366,378 (GRCm38)	T600A	probably benign	Het
Fam205a1	A	G	4: 42,849,345 (GRCm38)	V937A	probably benign	Het
Fbxo33	T	C	12: 59,204,649 (GRCm38)	N360S	probably benign	Het
Fbxw5	A	G	2: 25,503,603 (GRCm38)	D72G	possibly damaging	Het
Fhad1	T	A	4: 141,890,952 (GRCm38)	K1388*	probably null	Het
Fzd7	A	G	1: 59,483,845 (GRCm38)	M296V	probably benign	Het
Gdpd3	T	C	7: 126,771,164 (GRCm38)	I257T	probably benign	Het
Glt28d2	T	G	3: 85,871,941 (GRCm38)	D75A	possibly damaging	Het
Gm14295	G	A	2: 176,811,144 (GRCm38)		probably benign	Het
Gm28729	A	G	9: 96,519,441 (GRCm38)	I98T	probably damaging	Het
Gm4924	C	T	10: 82,377,231 (GRCm38)	Q288*	probably null	Het
Gpr150	T	C	13: 76,056,557 (GRCm38)	M90V	probably damaging	Het
Ireb2	G	A	9: 54,887,372 (GRCm38)	V331I	probably benign	Het
Kdelc2	T	C	9: 53,399,742 (GRCm38)	V481A	possibly damaging	Het
Lpcat2b	A	T	5: 107,433,894 (GRCm38)	Y363F	probably benign	Het
Me2	T	C	18: 73,785,781 (GRCm38)	I410V	probably benign	Het
Naxe	T	C	3: 88,058,230 (GRCm38)	E58G	probably damaging	Het
Nlrp10	T	A	7: 108,924,464 (GRCm38)	D603V	probably benign	Het
Nlrp1b	T	A	11: 71,156,079 (GRCm38)	Y1149F	probably damaging	Het
Nrg1	A	G	8: 31,818,480 (GRCm38)	Y503H	probably damaging	Het
Nxpe4	C	T	9: 48,392,804 (GRCm38)	P64S	probably benign	Het
Pkd1l3	A	T	8: 109,623,179 (GRCm38)	T219S	unknown	Het
Plagl1	T	C	10: 13,127,231 (GRCm38)	L81P	probably damaging	Het
Polq	A	G	16: 37,045,812 (GRCm38)	Q457R	possibly damaging	Het
Ppargc1a	C	A	5: 51,473,911 (GRCm38)	A459S	probably damaging	Het
Ppp1r13l	A	G	7: 19,370,437 (GRCm38)	D253G	probably benign	Het
Prl2c2	T	A	13: 13,002,172 (GRCm38)	N55Y	probably damaging	Het
Prlr	T	C	15: 10,328,849 (GRCm38)	F470S	probably benign	Het
Serpina12	T	C	12: 104,038,241 (GRCm38)	D44G	probably benign	Het
Sfxn1	T	G	13: 54,106,507 (GRCm38)	S291R	probably benign	Het
Sipa1l1	A	G	12: 82,341,672 (GRCm38)	D224G	probably benign	Het
Stox2	T	A	8: 47,192,020 (GRCm38)	M802L	probably benign	Het
Tmem150a	G	A	6: 72,356,745 (GRCm38)	R30H	probably benign	Het
Tmem210	G	A	2: 25,288,764 (GRCm38)		probably null	Het
Tor3a	T	C	1: 156,656,573 (GRCm38)	N269S	possibly damaging	Het
Trp63	A	C	16: 25,884,853 (GRCm38)	N423T	probably benign	Het
Vmn2r60	A	G	7: 42,135,621 (GRCm38)	I86V	possibly damaging	Het
Vmn2r74	T	C	7: 85,957,140 (GRCm38)	I333V	probably benign	Het
Vwa7	C	A	17: 35,021,210 (GRCm38)	H385N	possibly damaging	Het
Wdr1	T	C	5: 38,529,671 (GRCm38)		probably null	Het
Wdr31	A	G	4: 62,463,424 (GRCm38)	Y57H	probably damaging	Het
Zbtb44	T	A	9: 31,053,382 (GRCm38)	H29Q	probably damaging	Het
Zfp532	T	A	18: 65,624,438 (GRCm38)	S481T	probably damaging	Het
Zfp955b	G	T	17: 33,302,110 (GRCm38)	R184S	probably benign	Het

Other mutations in Slc30a7

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00561:Slc30a7	APN	3	115,946,720 (GRCm38)	splice site	probably null
IGL01161:Slc30a7	APN	3	115,954,110 (GRCm38)	missense	possibly damaging	0.54
IGL01360:Slc30a7	APN	3	115,990,116 (GRCm38)	missense	probably damaging	1.00
IGL02573:Slc30a7	APN	3	115,990,147 (GRCm38)	splice site	probably benign
R0833:Slc30a7	UTSW	3	115,990,140 (GRCm38)	critical splice acceptor site	probably null
R0836:Slc30a7	UTSW	3	115,990,140 (GRCm38)	critical splice acceptor site	probably null
R1381:Slc30a7	UTSW	3	115,956,870 (GRCm38)	critical splice donor site	probably null
R2445:Slc30a7	UTSW	3	115,978,653 (GRCm38)	missense	probably damaging	1.00
R4072:Slc30a7	UTSW	3	115,946,680 (GRCm38)	missense	probably damaging	0.96
R4850:Slc30a7	UTSW	3	115,993,008 (GRCm38)	missense	probably damaging	0.99
R5429:Slc30a7	UTSW	3	116,006,925 (GRCm38)	missense	possibly damaging	0.90
R5586:Slc30a7	UTSW	3	115,990,051 (GRCm38)	missense	probably benign	0.36
R6813:Slc30a7	UTSW	3	115,981,811 (GRCm38)	missense	probably benign	0.01
R6889:Slc30a7	UTSW	3	115,954,153 (GRCm38)	missense	probably damaging	1.00
R8445:Slc30a7	UTSW	3	116,007,346 (GRCm38)	unclassified	probably benign
R8872:Slc30a7	UTSW	3	115,946,668 (GRCm38)	missense	possibly damaging	0.69
X0023:Slc30a7	UTSW	3	115,990,025 (GRCm38)	missense	probably damaging	0.98

Predicted Primers

PCR Primer
(F):5'- GGCGTCTACAGCTCTACCATTC -3'
(R):5'- ACTATCAGGAGGCCTTTTGC -3'

Sequencing Primer
(F):5'- ACAGCTCTACCATTCCCATGC -3'
(R):5'- AGGCCTTTTGCTTTCTGGAAGTC -3'

Posted On

2017-10-10