Mutagenetix > Incidental Mutation

Incidental Mutation 'R0537:Tmem168'

49494

Institutional Source

Beutler Lab

Gene Symbol

Tmem168

Ensembl Gene

ENSMUSG00000029569

Gene Name

transmembrane protein 168

Synonyms

8430437G11Rik, 5730526F17Rik

MMRRC Submission

038729-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.080) question?

Stock #

R0537 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

13580688-13608097 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

C to A at 13603360 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Cysteine to Phenylalanine at position 2 (C2F)

Ref Sequence

ENSEMBL: ENSMUSP00000031554 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000031554] [ENSMUST00000149123]

AlphaFold

Q91VX9

Predicted Effect

probably damaging
Transcript: ENSMUST00000031554
AA Change: C2F

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)

SMART Domains

Protein: ENSMUSP00000031554
Gene: ENSMUSG00000029569
AA Change: C2F

Domain	Start	End	E-Value	Type
transmembrane domain	35	57	N/A	INTRINSIC
transmembrane domain	63	85	N/A	INTRINSIC
transmembrane domain	92	109	N/A	INTRINSIC
low complexity region	152	163	N/A	INTRINSIC
transmembrane domain	170	192	N/A	INTRINSIC
transmembrane domain	199	216	N/A	INTRINSIC
transmembrane domain	226	248	N/A	INTRINSIC
transmembrane domain	261	283	N/A	INTRINSIC
transmembrane domain	298	320	N/A	INTRINSIC
transmembrane domain	359	378	N/A	INTRINSIC

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000127050

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000138637

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000140750

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000146139

Predicted Effect

probably benign
Transcript: ENSMUST00000149123

SMART Domains

Protein: ENSMUSP00000145372
Gene: ENSMUSG00000029569

Domain	Start	End	E-Value	Type
SCOP:d1jxqa_	29	167	8e-3	SMART

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000155179

Meta Mutation Damage Score

0.2317

Coding Region Coverage

1x: 99.2%
3x: 98.5%
10x: 96.7%
20x: 93.9%

Validation Efficiency

100% (53/53)

Allele List at MGI

Other mutations in this stock

Total: 51 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
4930474N05Rik	A	T	14: 35,818,657 (GRCm39)	K218N	probably benign	Het
Acot11	T	C	4: 106,619,652 (GRCm39)	E156G	probably benign	Het
Arhgef28	A	T	13: 98,094,224 (GRCm39)	N973K	probably damaging	Het
B4galt3	T	C	1: 171,101,821 (GRCm39)		probably benign	Het
Bmpr1a	T	C	14: 34,165,769 (GRCm39)		probably benign	Het
Camkmt	A	T	17: 85,702,087 (GRCm39)	I184F	probably benign	Het
Ccdc33	T	C	9: 58,024,737 (GRCm39)	Y163C	probably damaging	Het
Ccdc9	A	G	7: 16,014,701 (GRCm39)		probably benign	Het
Dars2	A	T	1: 160,888,318 (GRCm39)	C201S	possibly damaging	Het
Dnajc1	A	T	2: 18,312,767 (GRCm39)	S194R	possibly damaging	Het
Dock8	A	G	19: 25,148,941 (GRCm39)	D1473G	probably benign	Het
Dpm2	T	A	2: 32,462,961 (GRCm39)		probably null	Het
Dsg4	T	C	18: 20,591,628 (GRCm39)	S456P	probably damaging	Het
Gys1	T	C	7: 45,089,425 (GRCm39)	S195P	probably damaging	Het
Heatr6	G	T	11: 83,670,290 (GRCm39)	E948*	probably null	Het
Itgal	G	A	7: 126,910,445 (GRCm39)	R518Q	possibly damaging	Het
Klhdc8b	G	C	9: 108,326,422 (GRCm39)	R158G	possibly damaging	Het
Klhl41	G	A	2: 69,500,554 (GRCm39)	R5Q	probably benign	Het
Lrrtm4	A	T	6: 79,999,103 (GRCm39)	T172S	probably benign	Het
Lypd1	A	G	1: 125,840,604 (GRCm39)		probably benign	Het
Mei1	T	C	15: 81,975,562 (GRCm39)	F121S	possibly damaging	Het
Mtor	C	T	4: 148,622,817 (GRCm39)	R1966W	probably damaging	Het
Myh7	A	G	14: 55,228,256 (GRCm39)	F247L	possibly damaging	Het
Nebl	G	T	2: 17,409,026 (GRCm39)	D392E	possibly damaging	Het
Notch2	C	A	3: 98,024,057 (GRCm39)	N840K	possibly damaging	Het
Nubp1	T	C	16: 10,240,678 (GRCm39)		probably benign	Het
Or5w16	A	T	2: 87,577,017 (GRCm39)	Q159L	probably benign	Het
Or7g19	T	C	9: 18,856,444 (GRCm39)	S167P	probably damaging	Het
Pcdh17	T	A	14: 84,684,897 (GRCm39)	S455T	probably damaging	Het
Picalm	C	A	7: 89,779,876 (GRCm39)	H32Q	probably benign	Het
Pold1	T	C	7: 44,184,516 (GRCm39)	E828G	probably damaging	Het
Ptpro	T	A	6: 137,420,592 (GRCm39)	V1007D	probably damaging	Het
Rala	A	T	13: 18,063,233 (GRCm39)	N119K	probably benign	Het
Rasal2	A	T	1: 156,975,362 (GRCm39)	V1149E	possibly damaging	Het
Rd3	A	G	1: 191,715,501 (GRCm39)	Y92C	probably damaging	Het
Rps18-ps6	A	T	13: 97,897,071 (GRCm39)	F9Y	probably benign	Het
Sart1	A	T	19: 5,431,752 (GRCm39)	D635E	probably damaging	Het
Sec16b	A	G	1: 157,365,116 (GRCm39)	T335A	possibly damaging	Het
Slc11a2	C	T	15: 100,303,679 (GRCm39)	G185R	probably damaging	Het
Slc2a12	G	A	10: 22,540,967 (GRCm39)	R274H	probably damaging	Het
Spag17	T	C	3: 100,032,618 (GRCm39)	V2276A	probably damaging	Het
Tcam1	G	A	11: 106,174,904 (GRCm39)	E120K	probably benign	Het
Tenm2	T	C	11: 36,054,557 (GRCm39)	D601G	probably damaging	Het
Tmem80	A	G	7: 140,913,609 (GRCm39)	Y13C	probably damaging	Het
Try4	T	A	6: 41,281,296 (GRCm39)	N79K	probably benign	Het
Vldlr	C	A	19: 27,225,318 (GRCm39)	N798K	probably damaging	Het
Wdr41	A	G	13: 95,131,813 (GRCm39)		probably benign	Het
Zfp30	A	T	7: 29,492,160 (GRCm39)	E138V	probably damaging	Het
Zfp366	A	C	13: 99,365,786 (GRCm39)	T316P	probably damaging	Het
Zfp563	A	T	17: 33,323,659 (GRCm39)	S85C	possibly damaging	Het
Znfx1	T	C	2: 166,883,621 (GRCm39)	H162R	probably damaging	Het

Other mutations in Tmem168

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00786:Tmem168	APN	6	13,602,674 (GRCm39)	missense	probably benign	0.06
IGL01305:Tmem168	APN	6	13,583,045 (GRCm39)	missense	probably damaging	1.00
IGL01843:Tmem168	APN	6	13,582,940 (GRCm39)	missense	probably damaging	1.00
IGL02742:Tmem168	APN	6	13,603,261 (GRCm39)	missense	probably benign	0.04
IGL02863:Tmem168	APN	6	13,582,917 (GRCm39)	missense	probably damaging	0.98
ANU22:Tmem168	UTSW	6	13,583,045 (GRCm39)	missense	probably damaging	1.00
R0193:Tmem168	UTSW	6	13,583,312 (GRCm39)	missense	possibly damaging	0.81
R0630:Tmem168	UTSW	6	13,583,064 (GRCm39)	missense	probably benign
R0890:Tmem168	UTSW	6	13,603,271 (GRCm39)	missense	probably damaging	1.00
R1416:Tmem168	UTSW	6	13,591,400 (GRCm39)	missense	probably damaging	0.96
R1900:Tmem168	UTSW	6	13,583,070 (GRCm39)	missense	probably benign	0.02
R3947:Tmem168	UTSW	6	13,583,051 (GRCm39)	missense	probably damaging	1.00
R4362:Tmem168	UTSW	6	13,595,072 (GRCm39)	missense	probably benign	0.31
R4620:Tmem168	UTSW	6	13,594,952 (GRCm39)	missense	probably benign	0.03
R5693:Tmem168	UTSW	6	13,602,320 (GRCm39)	missense	probably benign	0.01
R6142:Tmem168	UTSW	6	13,591,368 (GRCm39)	missense	probably benign
R6328:Tmem168	UTSW	6	13,602,710 (GRCm39)	missense	probably benign
R6438:Tmem168	UTSW	6	13,602,673 (GRCm39)	missense	probably benign	0.06
R6711:Tmem168	UTSW	6	13,603,120 (GRCm39)	missense	probably damaging	1.00
R6827:Tmem168	UTSW	6	13,582,837 (GRCm39)	missense	probably damaging	0.99
R6987:Tmem168	UTSW	6	13,591,476 (GRCm39)	missense	possibly damaging	0.82
R7696:Tmem168	UTSW	6	13,602,937 (GRCm39)	missense	probably benign	0.01
R8295:Tmem168	UTSW	6	13,602,850 (GRCm39)	missense	probably damaging	0.99
R8344:Tmem168	UTSW	6	13,583,324 (GRCm39)	missense	probably benign
R8432:Tmem168	UTSW	6	13,602,535 (GRCm39)	missense	probably benign	0.30
R8992:Tmem168	UTSW	6	13,602,849 (GRCm39)	missense	possibly damaging	0.72
R9003:Tmem168	UTSW	6	13,591,446 (GRCm39)	missense	probably benign	0.06
R9325:Tmem168	UTSW	6	13,583,253 (GRCm39)	missense	probably benign

Predicted Primers

PCR Primer
(F):5'- AGAGACTTAAACTGGCTGCTTCCATTG -3'
(R):5'- GATCACGGGCATTTTCCTTTGTGTAAC -3'

Sequencing Primer
(F):5'- CTGGCTGCTTCCATTGAAAAG -3'
(R):5'- TGCAATTAGGATTTGAACTGGACG -3'

Posted On

2013-06-12