Mutagenetix > Incidental Mutations

Incidental Mutation 'R5753:Dock9'

499960

Institutional Source

Beutler Lab

Gene Symbol

Dock9

Ensembl Gene

ENSMUSG00000025558

Gene Name

dedicator of cytokinesis 9

Synonyms

D14Wsu89e, Zizimin1, B230309H04Rik

MMRRC Submission

043358-MU

Accession Numbers

Is this an essential gene?

Non essential (E-score: 0.000) question?

Stock #

R5753 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

121542046-121797837 bp(-) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 121634625 bp

Zygosity

Heterozygous

Amino Acid Change

Threonine to Alanine at position 540 (T540A)

Ref Sequence

ENSEMBL: ENSMUSP00000148328 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000040700] [ENSMUST00000100299] [ENSMUST00000212181] [ENSMUST00000212376]

Predicted Effect

probably benign
Transcript: ENSMUST00000040700
AA Change: T526A

PolyPhen 2 Score 0.017 (Sensitivity: 0.95; Specificity: 0.80)

SMART Domains

Protein: ENSMUSP00000047881
Gene: ENSMUSG00000025558
AA Change: T526A

Domain	Start	End	E-Value	Type
Pfam:DUF3398	58	151	5.6e-36	PFAM
PH	172	280	1.38e-16	SMART
Blast:PH	297	372	4e-25	BLAST
Pfam:DOCK-C2	631	822	5.3e-51	PFAM
Pfam:DHR-2	1523	2068	2.1e-212	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000100299
AA Change: T528A

PolyPhen 2 Score 0.008 (Sensitivity: 0.96; Specificity: 0.76)

SMART Domains

Protein: ENSMUSP00000097872
Gene: ENSMUSG00000025558
AA Change: T528A

Domain	Start	End	E-Value	Type
Pfam:DUF3398	58	153	1.5e-32	PFAM
PH	174	282	1.38e-16	SMART
Blast:PH	299	374	4e-25	BLAST
Pfam:DOCK-C2	632	825	1.3e-59	PFAM
low complexity region	1752	1763	N/A	INTRINSIC
Pfam:Ded_cyto	1836	2013	2.4e-69	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000212181
AA Change: T526A

PolyPhen 2 Score 0.014 (Sensitivity: 0.96; Specificity: 0.79)

Predicted Effect

probably benign
Transcript: ENSMUST00000212376
AA Change: T540A

PolyPhen 2 Score 0.054 (Sensitivity: 0.94; Specificity: 0.84)

Meta Mutation Damage Score

0.0835

Coding Region Coverage

1x: 99.3%
3x: 98.7%
10x: 97.5%
20x: 96.0%

Validation Efficiency

97% (58/60)

Allele List at MGI

Other mutations in this stock

Total: 55 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
2310003L06Rik	C	T	5: 87,972,515	T377I	probably damaging	Het
Abcb1a	A	G	5: 8,723,160	D796G	probably damaging	Het
Actn3	T	C	19: 4,864,567		probably null	Het
Ada	A	T	2: 163,735,398	S57T	probably benign	Het
Adamts6	A	G	13: 104,347,350	Y359C	probably damaging	Het
Adcy1	A	T	11: 7,130,300	I348F	probably damaging	Het
Ankrd11	T	C	8: 122,895,304	E603G	possibly damaging	Het
Bcas3	A	G	11: 85,822,084		probably benign	Het
Cldn1	C	A	16: 26,363,121	V113L	probably benign	Het
Erp27	A	G	6: 136,919,877	F109S	probably damaging	Het
F13a1	G	A	13: 36,898,108	Q541*	probably null	Het
Fam124a	T	C	14: 62,606,539	S499P	probably benign	Het
Fgd3	T	A	13: 49,274,940	E486V	possibly damaging	Het
Flnc	T	C	6: 29,433,489	S11P	probably benign	Het
Gm12508	C	A	4: 55,254,787		noncoding transcript	Het
Grk2	C	T	19: 4,290,468	R295H	probably damaging	Het
Gtf2ird1	A	G	5: 134,410,983	M131T	probably damaging	Het
Hist1h4d	G	A	13: 23,581,604	M1I	probably null	Het
Itpripl2	A	G	7: 118,491,009	V109A	probably damaging	Het
Jakmip2	T	C	18: 43,559,116	E585G	probably damaging	Het
Kbtbd3	A	T	9: 4,331,404	I593F	possibly damaging	Het
Lgr4	C	T	2: 110,002,512	Q316*	probably null	Het
Mcf2l	T	C	8: 12,999,993	F305S	probably damaging	Het
Nos1ap	T	A	1: 170,349,399	K145M	probably damaging	Het
Olfr1143	A	T	2: 87,803,252	M288L	probably benign	Het
Olfr1264	T	C	2: 90,021,503	T188A	possibly damaging	Het
Olfr1301	T	A	2: 111,754,801	I184K	possibly damaging	Het
Olfr19	A	T	16: 16,673,620	Y120*	probably null	Het
Olfr64	A	G	7: 103,893,201	L178P	probably damaging	Het
Olfr73	G	A	2: 88,034,576	L188F	probably damaging	Het
Olfr735	T	A	14: 50,345,588	T285S	probably damaging	Het
Pcdh9	T	A	14: 93,888,161	D191V	probably damaging	Het
Pde4d	T	A	13: 109,772,722		probably benign	Het
Phkb	C	T	8: 85,878,230	A88V	probably damaging	Het
Plec	A	G	15: 76,173,420	S4128P	probably damaging	Het
Plekha5	A	T	6: 140,537,004		probably null	Het
Rgs13	A	C	1: 144,140,740	N88K	probably benign	Het
Rho	T	A	6: 115,935,487	I104N	probably damaging	Het
Rnps1	T	C	17: 24,418,164		probably benign	Het
Slc10a7	G	T	8: 78,525,299		probably null	Het
Slc39a7	C	T	17: 34,030,176	R246K	probably damaging	Het
Sort1	G	C	3: 108,345,774	G510A	probably damaging	Het
Spag6l	A	G	16: 16,766,967		probably null	Het
Sync	T	A	4: 129,293,386	Y70*	probably null	Het
Tex45	A	T	8: 3,484,112	I350L	probably benign	Het
Timm8a2	T	C	14: 122,034,877	V64A	probably benign	Het
Tnfrsf11b	C	A	15: 54,254,059	V267L	possibly damaging	Het
Trim30b	A	G	7: 104,357,337	V104A	possibly damaging	Het
Tusc3	T	C	8: 39,096,946	S244P	probably damaging	Het
Usp16	T	A	16: 87,482,899	Y746N	probably damaging	Het
Vax1	G	T	19: 59,166,382	H274Q	probably benign	Het
Vmn2r108	A	G	17: 20,462,917	V675A	probably damaging	Het
Vmn2r12	A	T	5: 109,091,804	W298R	probably damaging	Het
Zfp948	A	G	17: 21,586,894	N116S	probably damaging	Het
Zkscan2	A	G	7: 123,480,700	V678A	probably benign	Het

Other mutations in Dock9

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00236:Dock9	APN	14	121668468	missense	probably benign	0.12
IGL00817:Dock9	APN	14	121698291	missense	probably damaging	0.96
IGL00923:Dock9	APN	14	121607092	unclassified	probably benign
IGL01385:Dock9	APN	14	121580583	missense	possibly damaging	0.94
IGL01567:Dock9	APN	14	121653084	missense	probably damaging	1.00
IGL01767:Dock9	APN	14	121622870	missense	possibly damaging	0.91
IGL01811:Dock9	APN	14	121559028	missense	probably damaging	1.00
IGL02512:Dock9	APN	14	121619538	splice site	probably benign
IGL02525:Dock9	APN	14	121640126	missense	probably damaging	1.00
IGL02550:Dock9	APN	14	121698312	start codon destroyed	probably null	0.07
IGL02559:Dock9	APN	14	121625147	splice site	probably benign
IGL02666:Dock9	APN	14	121580699	missense	probably benign	0.42
IGL02674:Dock9	APN	14	121595611	splice site	probably null
IGL02795:Dock9	APN	14	121639978	missense	probably benign	0.04
IGL03074:Dock9	APN	14	121607270	missense	possibly damaging	0.95
IGL03095:Dock9	APN	14	121639528	missense	probably damaging	1.00
IGL03294:Dock9	APN	14	121641623	splice site	probably benign
R0036:Dock9	UTSW	14	121622853	missense	probably damaging	1.00
R0050:Dock9	UTSW	14	121607225	missense	probably benign	0.43
R0050:Dock9	UTSW	14	121607225	missense	probably benign	0.43
R0164:Dock9	UTSW	14	121597665	missense	probably damaging	1.00
R0164:Dock9	UTSW	14	121597665	missense	probably damaging	1.00
R0270:Dock9	UTSW	14	121575999	missense	probably benign	0.02
R0494:Dock9	UTSW	14	121662584	missense	possibly damaging	0.64
R0726:Dock9	UTSW	14	121651768	nonsense	probably null
R1029:Dock9	UTSW	14	121599684	splice site	probably null
R1214:Dock9	UTSW	14	121586316	missense	probably benign	0.02
R1231:Dock9	UTSW	14	121575950	missense	possibly damaging	0.61
R1535:Dock9	UTSW	14	121546064	missense	probably damaging	1.00
R1629:Dock9	UTSW	14	121543574	missense	possibly damaging	0.88
R1637:Dock9	UTSW	14	121651775	missense	possibly damaging	0.66
R1733:Dock9	UTSW	14	121626880	missense	probably benign	0.01
R1772:Dock9	UTSW	14	121609798	missense	probably benign	0.07
R1855:Dock9	UTSW	14	121640159	missense	probably damaging	1.00
R1888:Dock9	UTSW	14	121625205	missense	probably benign	0.18
R1888:Dock9	UTSW	14	121625205	missense	probably benign	0.18
R1901:Dock9	UTSW	14	121625153	splice site	probably null
R1920:Dock9	UTSW	14	121583380	missense	probably damaging	1.00
R1987:Dock9	UTSW	14	121591830	missense	probably benign	0.00
R3035:Dock9	UTSW	14	121606837	missense	possibly damaging	0.60
R3851:Dock9	UTSW	14	121629086	splice site	probably null
R4020:Dock9	UTSW	14	121606855	missense	probably benign	0.00
R4021:Dock9	UTSW	14	121626912	missense	possibly damaging	0.80
R4089:Dock9	UTSW	14	121583471	missense	probably damaging	1.00
R4258:Dock9	UTSW	14	121581442	missense	probably benign	0.00
R4423:Dock9	UTSW	14	121562053	critical splice donor site	probably null
R4561:Dock9	UTSW	14	121559007	missense	probably benign	0.01
R4604:Dock9	UTSW	14	121668459	missense	probably damaging	1.00
R4646:Dock9	UTSW	14	121586246	missense	probably damaging	1.00
R4647:Dock9	UTSW	14	121586246	missense	probably damaging	1.00
R4776:Dock9	UTSW	14	121610097	missense	possibly damaging	0.81
R4809:Dock9	UTSW	14	121546596	missense	probably benign	0.37
R4865:Dock9	UTSW	14	121543505	makesense	probably null
R4951:Dock9	UTSW	14	121653135	missense	probably benign	0.35
R5151:Dock9	UTSW	14	121578170	missense	probably damaging	1.00
R5359:Dock9	UTSW	14	121653060	missense	possibly damaging	0.69
R5366:Dock9	UTSW	14	121578203	missense	probably damaging	1.00
R5502:Dock9	UTSW	14	121610182	splice site	probably null
R5579:Dock9	UTSW	14	121599695	missense	probably damaging	1.00
R5836:Dock9	UTSW	14	121681351	missense	probably damaging	1.00
R5858:Dock9	UTSW	14	121628792	missense	probably benign	0.00
R5890:Dock9	UTSW	14	121668408	critical splice donor site	probably null
R6075:Dock9	UTSW	14	121545973	missense	probably benign
R6298:Dock9	UTSW	14	121634594	missense	probably damaging	1.00
R6306:Dock9	UTSW	14	121562080	missense	probably damaging	1.00
R6321:Dock9	UTSW	14	121546021	missense	probably damaging	1.00
R6330:Dock9	UTSW	14	121605243	start codon destroyed	probably null	0.00
R6719:Dock9	UTSW	14	121610027	missense	probably damaging	1.00
R6784:Dock9	UTSW	14	121543514	missense	probably damaging	1.00
R6826:Dock9	UTSW	14	121622918	missense	probably damaging	1.00
R6830:Dock9	UTSW	14	121622918	missense	probably damaging	1.00
R6838:Dock9	UTSW	14	121546596	missense	possibly damaging	0.71
R6868:Dock9	UTSW	14	121586264	missense	probably benign	0.37
R6919:Dock9	UTSW	14	121643152	missense	probably benign	0.42
R6989:Dock9	UTSW	14	121627379	missense	probably damaging	1.00
R7539:Dock9	UTSW	14	121581436	missense	probably damaging	1.00
R7645:Dock9	UTSW	14	121597663	missense	probably benign	0.44
R7875:Dock9	UTSW	14	121625984	nonsense	probably null
R7900:Dock9	UTSW	14	121546079	missense	possibly damaging	0.84
R8040:Dock9	UTSW	14	121651794	missense	probably benign	0.06
R8420:Dock9	UTSW	14	121546042	missense	probably damaging	1.00
R8511:Dock9	UTSW	14	121627389	missense	probably benign	0.40
R8511:Dock9	UTSW	14	121681435	missense	probably damaging	1.00
R8514:Dock9	UTSW	14	121658787	missense	probably benign	0.25
R8691:Dock9	UTSW	14	121640105	missense	possibly damaging	0.49
R8804:Dock9	UTSW	14	121605183	missense	probably damaging	0.98
R8894:Dock9	UTSW	14	121622961	missense	not run
Z1088:Dock9	UTSW	14	121555275	missense	probably damaging	1.00
Z1176:Dock9	UTSW	14	121651782	missense	probably benign

Predicted Primers

PCR Primer
(F):5'- CCACAAAGCTCCTCAGGTAG -3'
(R):5'- CCTGTGTCCCATATGAATGTGTG -3'

Sequencing Primer
(F):5'- GCTCCTCAGGTAGACAAACAAG -3'
(R):5'- CTCAGTATGGGCTTTTGGCTGAAAC -3'

Posted On

2017-11-30