Incidental Mutation 'R5442:Oas1a'
| ID |
501026 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Oas1a
|
| Ensembl Gene |
ENSMUSG00000052776 |
| Gene Name |
2'-5' oligoadenylate synthetase 1A |
| Synonyms |
L3 |
| MMRRC Submission |
043007-MU
|
| Accession Numbers |
|
| Essential gene? |
Non essential
(E-score: 0.000)
|
| Stock # |
R5442 (G1)
|
| Quality Score |
225 |
|
Status
|
Not validated
|
| Chromosome |
5 |
| Chromosomal Location |
121034319-121045584 bp(-) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
T to C
at 121035269 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Threonine to Alanine
at position 349
(T349A)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000079198
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000080322]
|
| AlphaFold |
P11928 |
| Predicted Effect |
probably benign
Transcript: ENSMUST00000080322
AA Change: T349A
PolyPhen 2
Score 0.003 (Sensitivity: 0.98; Specificity: 0.44)
|
| SMART Domains |
Protein: ENSMUSP00000079198
Gene: ENSMUSG00000052776
AA Change: T349A
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:NTP_transf_2
|
38 |
139 |
9.8e-14 |
PFAM |
|
Pfam:OAS1_C
|
164 |
349 |
1.9e-87 |
PFAM |
|
| Coding Region Coverage |
- 1x: 99.2%
- 3x: 98.5%
- 10x: 96.9%
- 20x: 94.3%
|
| Validation Efficiency |
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 37 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Aatk |
A |
G |
11: 119,909,594 (GRCm39) |
M114T |
probably benign |
Het |
| Ablim3 |
A |
T |
18: 61,990,296 (GRCm39) |
|
probably null |
Het |
| Adcy10 |
A |
G |
1: 165,340,709 (GRCm39) |
D238G |
probably benign |
Het |
| Astn2 |
G |
T |
4: 65,500,023 (GRCm39) |
S955R |
possibly damaging |
Het |
| Casc3 |
A |
G |
11: 98,712,297 (GRCm39) |
E112G |
probably damaging |
Het |
| Cetn4 |
C |
T |
3: 37,364,094 (GRCm39) |
V39I |
probably benign |
Het |
| Commd4 |
A |
G |
9: 57,064,090 (GRCm39) |
V37A |
possibly damaging |
Het |
| Dyrk2 |
T |
C |
10: 118,696,643 (GRCm39) |
Q205R |
possibly damaging |
Het |
| Gal3st4 |
A |
G |
5: 138,264,042 (GRCm39) |
V319A |
possibly damaging |
Het |
| Inpp5d |
G |
A |
1: 87,645,788 (GRCm39) |
A1058T |
probably benign |
Het |
| Lpin3 |
A |
G |
2: 160,746,936 (GRCm39) |
Y781C |
probably damaging |
Het |
| Lrat |
C |
T |
3: 82,810,527 (GRCm39) |
V165M |
probably damaging |
Het |
| Ltbr |
G |
A |
6: 125,289,757 (GRCm39) |
R146W |
probably damaging |
Het |
| Nlrp6 |
T |
C |
7: 140,502,103 (GRCm39) |
S142P |
probably benign |
Het |
| Or52e8 |
A |
T |
7: 104,624,435 (GRCm39) |
F252L |
possibly damaging |
Het |
| Or5m3b |
T |
C |
2: 85,872,295 (GRCm39) |
V212A |
probably benign |
Het |
| Or5v1 |
A |
T |
17: 37,810,330 (GRCm39) |
I263F |
probably damaging |
Het |
| Or8c20 |
T |
A |
9: 38,261,158 (GRCm39) |
S260T |
probably benign |
Het |
| Pakap |
C |
A |
4: 57,637,876 (GRCm39) |
P18Q |
probably null |
Het |
| Pcdha2 |
T |
C |
18: 37,072,915 (GRCm39) |
V182A |
probably benign |
Het |
| Phactr3 |
A |
G |
2: 177,784,254 (GRCm39) |
D26G |
probably benign |
Het |
| Phrf1 |
G |
A |
7: 140,820,850 (GRCm39) |
R159H |
probably damaging |
Het |
| R3hdm4 |
C |
T |
10: 79,748,292 (GRCm39) |
E162K |
possibly damaging |
Het |
| Rab3ip |
T |
C |
10: 116,754,753 (GRCm39) |
T268A |
probably benign |
Het |
| Rapgef3 |
T |
C |
15: 97,656,742 (GRCm39) |
D299G |
probably damaging |
Het |
| Rem1 |
A |
G |
2: 152,469,977 (GRCm39) |
|
probably null |
Het |
| Slc28a2b |
A |
G |
2: 122,317,350 (GRCm39) |
N36S |
probably benign |
Het |
| Syne1 |
A |
G |
10: 5,293,473 (GRCm39) |
M1286T |
probably benign |
Het |
| Thsd7a |
T |
C |
6: 12,748,799 (GRCm39) |
T52A |
probably benign |
Het |
| Tmem135 |
A |
T |
7: 88,793,872 (GRCm39) |
F390Y |
probably damaging |
Het |
| Trio |
T |
C |
15: 27,856,280 (GRCm39) |
D696G |
probably benign |
Het |
| Ttll11 |
T |
C |
2: 35,793,135 (GRCm39) |
*191W |
probably null |
Het |
| Ubr4 |
A |
G |
4: 139,135,083 (GRCm39) |
D805G |
probably damaging |
Het |
| Usp9y |
A |
G |
Y: 1,336,467 (GRCm39) |
I1469T |
possibly damaging |
Het |
| Vmn1r70 |
G |
T |
7: 10,367,877 (GRCm39) |
A122S |
possibly damaging |
Het |
| Vmn2r78 |
G |
T |
7: 86,569,330 (GRCm39) |
L74F |
possibly damaging |
Het |
| Wdfy3 |
T |
C |
5: 102,044,425 (GRCm39) |
E1860G |
probably benign |
Het |
|
| Other mutations in Oas1a |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL01822:Oas1a
|
APN |
5 |
121,037,277 (GRCm39) |
missense |
probably benign |
0.01 |
|
IGL02299:Oas1a
|
APN |
5 |
121,043,755 (GRCm39) |
missense |
probably benign |
|
|
IGL02951:Oas1a
|
APN |
5 |
121,043,727 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL03112:Oas1a
|
APN |
5 |
121,036,412 (GRCm39) |
missense |
possibly damaging |
0.95 |
|
IGL03230:Oas1a
|
APN |
5 |
121,036,419 (GRCm39) |
missense |
probably benign |
0.23 |
|
IGL03356:Oas1a
|
APN |
5 |
121,043,908 (GRCm39) |
missense |
probably damaging |
0.99 |
|
IGL03379:Oas1a
|
APN |
5 |
121,035,062 (GRCm39) |
missense |
possibly damaging |
0.70 |
|
R0625:Oas1a
|
UTSW |
5 |
121,037,322 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1279:Oas1a
|
UTSW |
5 |
121,035,241 (GRCm39) |
critical splice donor site |
probably null |
|
|
R1914:Oas1a
|
UTSW |
5 |
121,043,876 (GRCm39) |
missense |
possibly damaging |
0.48 |
|
R1915:Oas1a
|
UTSW |
5 |
121,043,876 (GRCm39) |
missense |
possibly damaging |
0.48 |
|
R4758:Oas1a
|
UTSW |
5 |
121,045,401 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4928:Oas1a
|
UTSW |
5 |
121,043,787 (GRCm39) |
missense |
probably benign |
|
|
R5267:Oas1a
|
UTSW |
5 |
121,037,284 (GRCm39) |
missense |
probably benign |
0.00 |
|
R5487:Oas1a
|
UTSW |
5 |
121,045,490 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6853:Oas1a
|
UTSW |
5 |
121,045,491 (GRCm39) |
missense |
possibly damaging |
0.95 |
|
R6880:Oas1a
|
UTSW |
5 |
121,040,003 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R7953:Oas1a
|
UTSW |
5 |
121,035,080 (GRCm39) |
missense |
probably benign |
0.32 |
|
R8043:Oas1a
|
UTSW |
5 |
121,035,080 (GRCm39) |
missense |
probably benign |
0.32 |
|
R8363:Oas1a
|
UTSW |
5 |
121,043,902 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8738:Oas1a
|
UTSW |
5 |
121,040,019 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8863:Oas1a
|
UTSW |
5 |
121,043,943 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9474:Oas1a
|
UTSW |
5 |
121,037,317 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9475:Oas1a
|
UTSW |
5 |
121,037,317 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9612:Oas1a
|
UTSW |
5 |
121,040,028 (GRCm39) |
missense |
possibly damaging |
0.70 |
|
Z1177:Oas1a
|
UTSW |
5 |
121,039,958 (GRCm39) |
missense |
possibly damaging |
0.75 |
|
| Predicted Primers |
PCR Primer
(F):5'- TCTTCTACCTGAGGATGGAGGG -3'
(R):5'- CAGATCTACTAATGAAGAAGGGCC -3'
Sequencing Primer
(F):5'- GAAGGTAGAGCATGGTCAAAACATC -3'
(R):5'- GGGGGTCTTATGTACCCTTAATGGC -3'
|
| Posted On |
2017-12-01 |
Incidental Mutation