Incidental Mutation 'R6223:Sirpb1a'
ID 504127
Institutional Source Beutler Lab
Gene Symbol Sirpb1a
Ensembl Gene ENSMUSG00000095788
Gene Name signal-regulatory protein beta 1A
Synonyms 9930027N05Rik, Sirpb1
MMRRC Submission 044354-MU
Accession Numbers
Is this an essential gene? Probably non essential (E-score: 0.056) question?
Stock # R6223 (G1)
Quality Score 225.009
Status Not validated
Chromosome 3
Chromosomal Location 15371653-15426520 bp(-) (GRCm38)
Type of Mutation missense
DNA Base Change (assembly) A to G at 15379026 bp (GRCm38)
Zygosity Heterozygous
Amino Acid Change Valine to Alanine at position 388 (V388A)
Ref Sequence ENSEMBL: ENSMUSP00000096807 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000099201] [ENSMUST00000192700]
AlphaFold A0A0A6YYP6
Predicted Effect probably benign
Transcript: ENSMUST00000099201
AA Change: V388A

PolyPhen 2 Score 0.019 (Sensitivity: 0.95; Specificity: 0.80)
SMART Domains Protein: ENSMUSP00000096807
Gene: ENSMUSG00000095788
AA Change: V388A

DomainStartEndE-ValueType
low complexity region 15 21 N/A INTRINSIC
IG 37 143 2.48e-8 SMART
IGc1 163 236 1.17e-4 SMART
IGc1 269 339 4.91e-4 SMART
transmembrane domain 364 386 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000192700
AA Change: V382A

PolyPhen 2 Score 0.001 (Sensitivity: 0.99; Specificity: 0.15)
SMART Domains Protein: ENSMUSP00000141504
Gene: ENSMUSG00000095788
AA Change: V382A

DomainStartEndE-ValueType
low complexity region 15 21 N/A INTRINSIC
IG 37 143 2.48e-8 SMART
IGc1 163 236 1.17e-4 SMART
IGc1 269 339 4.91e-4 SMART
transmembrane domain 364 386 N/A INTRINSIC
Coding Region Coverage
  • 1x: 99.9%
  • 3x: 99.7%
  • 10x: 98.4%
  • 20x: 95.6%
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 60 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
6820408C15Rik A C 2: 152,427,953 R8S probably benign Het
Abca8b A G 11: 109,977,846 V164A probably benign Het
Acadm C A 3: 153,938,549 probably null Het
Ap3b2 G A 7: 81,473,462 R435* probably null Het
Art2b A G 7: 101,579,951 F247S possibly damaging Het
C1rb T A 6: 124,574,580 D216E probably benign Het
Casz1 C A 4: 148,933,383 D90E probably damaging Het
Ccdc13 A G 9: 121,798,909 probably benign Het
Cdc25a C A 9: 109,889,774 P409T possibly damaging Het
Cidea A C 18: 67,358,739 K23T possibly damaging Het
Clspn T A 4: 126,586,168 D1101E probably damaging Het
Col10a1 A T 10: 34,395,187 D385V probably damaging Het
Crat C T 2: 30,407,030 V304I probably benign Het
Cyp2d26 A T 15: 82,791,717 W265R probably benign Het
Dock8 A T 19: 25,161,052 Y1247F probably benign Het
Eed A G 7: 89,956,287 Y365H probably damaging Het
Fabp5 T A 3: 10,015,110 F73L probably benign Het
Fbn1 C T 2: 125,412,671 C224Y possibly damaging Het
Ggcx T C 6: 72,429,605 F684L probably damaging Het
Glrp1 G A 1: 88,503,442 Q69* probably null Het
Gm29797 T C 2: 181,659,057 V115A possibly damaging Het
Gtf3c1 C T 7: 125,676,625 R543K probably benign Het
Ifih1 T C 2: 62,598,259 I891V probably benign Het
Ifnar2 C T 16: 91,387,988 T89M probably damaging Het
Kat6a C A 8: 22,940,426 N1932K unknown Het
Mgat5 A T 1: 127,382,979 D210V possibly damaging Het
Mmel1 A G 4: 154,871,702 probably null Het
Myh3 G T 11: 67,098,017 V1499L probably benign Het
Ncan A C 8: 70,109,954 D551E probably benign Het
Nol11 G T 11: 107,171,616 T598K possibly damaging Het
Olfml3 G A 3: 103,736,460 R202W probably damaging Het
Olfr1362 G A 13: 21,611,366 T201I probably benign Het
Olfr1509 A G 14: 52,450,679 R89G probably benign Het
Pcdh9 T C 14: 93,015,733 K1131E probably benign Het
Pcolce A G 5: 137,605,299 M424T probably damaging Het
Pi16 C A 17: 29,327,439 S397* probably null Het
Pi4ka A T 16: 17,357,571 Y464* probably null Het
Pik3c2b T A 1: 133,070,357 L324M probably damaging Het
Prdm2 T C 4: 143,142,207 N179S probably benign Het
Prss56 C T 1: 87,185,412 P183S probably benign Het
Prx T G 7: 27,516,836 M393R probably damaging Het
Qpctl T C 7: 19,143,209 D328G probably damaging Het
Qser1 A G 2: 104,787,648 S940P probably benign Het
Rchy1 G A 5: 91,957,967 R41W probably damaging Het
Scp2d1 T C 2: 144,823,948 I69T possibly damaging Het
Ssu2 G T 6: 112,376,448 C238* probably null Het
Stub1 C T 17: 25,832,813 G14D probably damaging Het
Tab1 T A 15: 80,148,263 C24S probably damaging Het
Tdrd1 T C 19: 56,865,850 V1076A probably damaging Het
Tex10 T C 4: 48,468,525 R134G probably damaging Het
Tg T A 15: 66,707,922 N1525K probably benign Het
Tll2 G A 19: 41,135,952 T208I possibly damaging Het
Tmem232 T C 17: 65,500,196 M1V probably null Het
Ttc7b A G 12: 100,387,109 probably null Het
Ubb A G 11: 62,552,525 E127G possibly damaging Het
Ulk2 A T 11: 61,787,504 Y796* probably null Het
Vdac2 G A 14: 21,845,178 G265R possibly damaging Het
Vmn2r45 A T 7: 8,483,302 V329E probably benign Het
Wdr60 T C 12: 116,257,458 D11G possibly damaging Het
Zfp651 G A 9: 121,763,787 R391Q possibly damaging Het
Other mutations in Sirpb1a
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00493:Sirpb1a APN 3 15410728 unclassified probably benign
IGL00597:Sirpb1a APN 3 15416917 missense probably damaging 1.00
IGL01521:Sirpb1a APN 3 15410501 missense probably benign 0.00
IGL01678:Sirpb1a APN 3 15411310 missense probably damaging 1.00
IGL02154:Sirpb1a APN 3 15410444 missense probably damaging 1.00
IGL02275:Sirpb1a APN 3 15410409 critical splice donor site probably null
IGL02419:Sirpb1a APN 3 15426338 missense probably benign
IGL02657:Sirpb1a APN 3 15417051 missense possibly damaging 0.85
IGL03086:Sirpb1a APN 3 15426328 splice site probably null
PIT4142001:Sirpb1a UTSW 3 15411198 missense probably benign 0.00
R0270:Sirpb1a UTSW 3 15410527 missense probably damaging 1.00
R1975:Sirpb1a UTSW 3 15379081 missense probably benign 0.00
R3432:Sirpb1a UTSW 3 15426387 missense probably damaging 0.98
R4613:Sirpb1a UTSW 3 15417037 missense probably benign 0.09
R5325:Sirpb1a UTSW 3 15411443 missense possibly damaging 0.90
R6526:Sirpb1a UTSW 3 15379020 missense probably damaging 0.99
R6903:Sirpb1a UTSW 3 15416924 missense probably damaging 0.99
R7349:Sirpb1a UTSW 3 15410604 missense probably damaging 0.99
R7513:Sirpb1a UTSW 3 15411443 missense possibly damaging 0.90
R8250:Sirpb1a UTSW 3 15379044 missense possibly damaging 0.92
R8700:Sirpb1a UTSW 3 15411359 missense probably damaging 0.97
R9263:Sirpb1a UTSW 3 15416932 missense probably damaging 1.00
R9553:Sirpb1a UTSW 3 15411260 missense probably damaging 0.99
Predicted Primers PCR Primer
(F):5'- ACTCCCATGTTACTCCATTGAG -3'
(R):5'- TTGTAGGGATCAGGAGTCAACC -3'

Sequencing Primer
(F):5'- CCATTGAGTAACATCCATCTGGTG -3'
(R):5'- CCAATGGGTCAAGTATAGACCAATG -3'
Posted On 2018-02-28