Incidental Mutation 'IGL01082:Or4a47'
| ID |
50444 |
| Institutional Source |
Australian Phenomics Network
(link to record)
|
| Gene Symbol |
Or4a47
|
| Ensembl Gene |
ENSMUSG00000075073 |
| Gene Name |
olfactory receptor family 4 subfamily A member 47 |
| Synonyms |
MOR231-1, Olfr1256, GA_x6K02T2Q125-51276848-51275928 |
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.092)
|
| Stock # |
IGL01082
|
| Quality Score |
|
|
Status
|
|
| Chromosome |
2 |
| Chromosomal Location |
89665367-89666287 bp(-) (GRCm39) |
| Type of Mutation |
unclassified |
| DNA Base Change (assembly) |
A to T
at 89674407 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000149123
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000099762]
[ENSMUST00000111520]
[ENSMUST00000213833]
[ENSMUST00000214428]
[ENSMUST00000215613]
|
| AlphaFold |
Q8VGP1 |
| Predicted Effect |
probably benign
Transcript: ENSMUST00000099762
|
| SMART Domains |
Protein: ENSMUSP00000097350
Gene: ENSMUSG00000075072
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
26 |
299 |
1e-47 |
PFAM |
|
Pfam:7tm_1
|
36 |
282 |
8.5e-16 |
PFAM |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000111520
|
| SMART Domains |
Protein: ENSMUSP00000107145
Gene: ENSMUSG00000075073
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
29 |
303 |
2.5e-47 |
PFAM |
|
Pfam:7TM_GPCR_Srsx
|
33 |
300 |
1.1e-5 |
PFAM |
|
Pfam:7tm_1
|
39 |
285 |
1.3e-16 |
PFAM |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000213833
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000214428
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000215613
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000216674
|
| Coding Region Coverage |
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 33 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Abca12 |
G |
A |
1: 71,353,273 (GRCm39) |
S723F |
probably damaging |
Het |
| Cacng5 |
C |
T |
11: 107,772,531 (GRCm39) |
V106I |
probably benign |
Het |
| Ccdc116 |
A |
G |
16: 16,959,856 (GRCm39) |
S278P |
probably damaging |
Het |
| Cep152 |
A |
T |
2: 125,411,465 (GRCm39) |
|
probably benign |
Het |
| Cftr |
T |
C |
6: 18,226,102 (GRCm39) |
V350A |
probably damaging |
Het |
| Dsc2 |
A |
T |
18: 20,176,849 (GRCm39) |
N399K |
probably damaging |
Het |
| Eif3d |
T |
C |
15: 77,843,943 (GRCm39) |
T468A |
probably damaging |
Het |
| Fam110b |
C |
T |
4: 5,799,461 (GRCm39) |
A293V |
possibly damaging |
Het |
| Flrt1 |
T |
C |
19: 7,073,339 (GRCm39) |
T403A |
probably benign |
Het |
| H3c6 |
A |
G |
13: 23,746,548 (GRCm39) |
|
probably benign |
Het |
| Ift140 |
T |
A |
17: 25,267,429 (GRCm39) |
V609E |
possibly damaging |
Het |
| Klb |
G |
A |
5: 65,533,283 (GRCm39) |
V531I |
possibly damaging |
Het |
| Krt73 |
T |
C |
15: 101,707,372 (GRCm39) |
|
probably null |
Het |
| Mcm2 |
A |
G |
6: 88,864,859 (GRCm39) |
V539A |
probably benign |
Het |
| Myb |
A |
G |
10: 21,028,843 (GRCm39) |
V85A |
probably damaging |
Het |
| Ndufs1 |
T |
C |
1: 63,203,976 (GRCm39) |
E102G |
probably damaging |
Het |
| Nr5a2 |
C |
A |
1: 136,773,206 (GRCm39) |
A499S |
probably benign |
Het |
| Opa1 |
A |
T |
16: 29,436,933 (GRCm39) |
|
probably benign |
Het |
| Or14j5 |
T |
A |
17: 38,161,514 (GRCm39) |
S10R |
probably benign |
Het |
| Or4c11b |
T |
C |
2: 88,625,637 (GRCm39) |
F304L |
probably benign |
Het |
| Pcnx1 |
G |
A |
12: 82,037,372 (GRCm39) |
E1877K |
possibly damaging |
Het |
| Sel1l |
A |
G |
12: 91,778,682 (GRCm39) |
V711A |
probably benign |
Het |
| Slc22a16 |
A |
G |
10: 40,449,860 (GRCm39) |
T120A |
probably benign |
Het |
| Slc26a1 |
G |
T |
5: 108,819,744 (GRCm39) |
T485N |
possibly damaging |
Het |
| Sp100 |
T |
C |
1: 85,597,741 (GRCm39) |
V201A |
possibly damaging |
Het |
| Spz1 |
T |
G |
13: 92,712,029 (GRCm39) |
K149T |
probably damaging |
Het |
| Stxbp5l |
A |
G |
16: 37,024,940 (GRCm39) |
S553P |
possibly damaging |
Het |
| Szt2 |
A |
G |
4: 118,254,821 (GRCm39) |
S290P |
probably damaging |
Het |
| Tbc1d10c |
A |
G |
19: 4,239,026 (GRCm39) |
Y165H |
probably damaging |
Het |
| Tnxb |
C |
A |
17: 34,933,584 (GRCm39) |
Q2335K |
probably damaging |
Het |
| Trim33 |
T |
C |
3: 103,234,175 (GRCm39) |
I471T |
possibly damaging |
Het |
| Vsig10 |
A |
G |
5: 117,472,970 (GRCm39) |
I188V |
probably benign |
Het |
| Zfp109 |
A |
T |
7: 23,933,784 (GRCm39) |
L45Q |
probably damaging |
Het |
|
| Other mutations in Or4a47 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL00338:Or4a47
|
APN |
2 |
89,665,802 (GRCm39) |
nonsense |
probably null |
|
|
IGL01613:Or4a47
|
APN |
2 |
89,666,152 (GRCm39) |
missense |
probably damaging |
0.98 |
|
IGL01969:Or4a47
|
APN |
2 |
89,666,064 (GRCm39) |
missense |
probably benign |
0.01 |
|
IGL02625:Or4a47
|
APN |
2 |
89,665,740 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0843:Or4a47
|
UTSW |
2 |
89,665,960 (GRCm39) |
missense |
probably benign |
0.01 |
|
R1270:Or4a47
|
UTSW |
2 |
89,665,666 (GRCm39) |
missense |
possibly damaging |
0.90 |
|
R1521:Or4a47
|
UTSW |
2 |
89,665,516 (GRCm39) |
nonsense |
probably null |
|
|
R2219:Or4a47
|
UTSW |
2 |
89,665,769 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2881:Or4a47
|
UTSW |
2 |
89,675,328 (GRCm39) |
splice site |
probably null |
|
|
R3121:Or4a47
|
UTSW |
2 |
89,665,858 (GRCm39) |
missense |
probably benign |
|
|
R3609:Or4a47
|
UTSW |
2 |
89,665,420 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R4984:Or4a47
|
UTSW |
2 |
89,666,157 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5153:Or4a47
|
UTSW |
2 |
89,665,578 (GRCm39) |
missense |
possibly damaging |
0.77 |
|
R5640:Or4a47
|
UTSW |
2 |
89,666,282 (GRCm39) |
missense |
probably benign |
0.08 |
|
R7198:Or4a47
|
UTSW |
2 |
89,666,076 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7862:Or4a47
|
UTSW |
2 |
89,665,468 (GRCm39) |
missense |
probably benign |
0.16 |
|
R8100:Or4a47
|
UTSW |
2 |
89,666,029 (GRCm39) |
nonsense |
probably null |
|
|
R8487:Or4a47
|
UTSW |
2 |
89,665,609 (GRCm39) |
missense |
probably benign |
0.06 |
|
| Posted On |
2013-06-21 |
Incidental Mutation