Mutagenetix > Incidental Mutations

Incidental Mutation 'R6255:Zfp990'

506048

Institutional Source

Beutler Lab

Gene Symbol

Zfp990

Ensembl Gene

ENSMUSG00000078503

Gene Name

zinc finger protein 990

Synonyms

Gm13225

MMRRC Submission

044372-MU

Accession Numbers

Is this an essential gene?

Probably non essential (E-score: 0.070) question?

Stock #

R6255 (G1)

Quality Score

182.009

Status

Validated

Chromosome

Chromosomal Location

145510759-145539188 bp(+) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

T to A at 145537789 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Asparagine to Lysine at position 452 (N452K)

Ref Sequence

ENSEMBL: ENSMUSP00000101368 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000105741] [ENSMUST00000105742] [ENSMUST00000136309]

AlphaFold

B1AVN5

Predicted Effect

probably benign
Transcript: ENSMUST00000105741
AA Change: N452K

PolyPhen 2 Score 0.001 (Sensitivity: 0.99; Specificity: 0.15)

SMART Domains

Protein: ENSMUSP00000101367
Gene: ENSMUSG00000078503
AA Change: N452K

Domain	Start	End	E-Value	Type
KRAB	13	76	1.34e-15	SMART
ZnF_C2H2	240	262	2.24e-3	SMART
ZnF_C2H2	268	290	3.58e-2	SMART
ZnF_C2H2	296	318	8.34e-3	SMART
ZnF_C2H2	324	346	1.22e-4	SMART
ZnF_C2H2	352	374	1.4e-4	SMART
ZnF_C2H2	380	402	9.73e-4	SMART
ZnF_C2H2	408	430	1.6e-4	SMART
ZnF_C2H2	436	458	1.92e-2	SMART
ZnF_C2H2	464	486	1.4e-4	SMART
ZnF_C2H2	492	514	9.73e-4	SMART
ZnF_C2H2	520	542	1.84e-4	SMART
ZnF_C2H2	548	570	4.47e-3	SMART
ZnF_C2H2	576	598	4.47e-3	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000105742
AA Change: N452K

PolyPhen 2 Score 0.001 (Sensitivity: 0.99; Specificity: 0.15)

SMART Domains

Protein: ENSMUSP00000101368
Gene: ENSMUSG00000078503
AA Change: N452K

Domain	Start	End	E-Value	Type
KRAB	13	76	1.34e-15	SMART
ZnF_C2H2	240	262	2.24e-3	SMART
ZnF_C2H2	268	290	3.58e-2	SMART
ZnF_C2H2	296	318	8.34e-3	SMART
ZnF_C2H2	324	346	1.22e-4	SMART
ZnF_C2H2	352	374	1.4e-4	SMART
ZnF_C2H2	380	402	9.73e-4	SMART
ZnF_C2H2	408	430	1.6e-4	SMART
ZnF_C2H2	436	458	1.92e-2	SMART
ZnF_C2H2	464	486	1.4e-4	SMART
ZnF_C2H2	492	514	9.73e-4	SMART
ZnF_C2H2	520	542	1.84e-4	SMART
ZnF_C2H2	548	570	4.47e-3	SMART
ZnF_C2H2	576	598	4.47e-3	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000136309

Coding Region Coverage

1x: 99.9%
3x: 99.6%
10x: 98.2%
20x: 94.8%

Validation Efficiency

100% (58/58)

Allele List at MGI

Other mutations in this stock

Total: 56 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
4833420G17Rik	T	A	13: 119,466,123	V7E	possibly damaging	Het
Aars2	G	A	17: 45,514,609	G333S	probably damaging	Het
Aen	T	A	7: 78,905,844	I85N	probably damaging	Het
Ahnak	C	A	19: 9,008,025	H2224Q	possibly damaging	Het
Aldh18a1	C	T	19: 40,580,043	R41H	possibly damaging	Het
Bpifb9b	T	A	2: 154,309,364	W2R	probably damaging	Het
Caprin2	A	G	6: 148,877,892	I139T	probably benign	Het
Cdhr3	T	A	12: 33,053,475	N381I	probably damaging	Het
Cecr2	A	G	6: 120,758,050	Y721C	probably damaging	Het
Cherp	G	T	8: 72,470,881	A125D	probably damaging	Het
Cped1	G	A	6: 22,138,715		probably null	Het
Ctdp1	T	A	18: 80,459,297		probably null	Het
Cyp2c55	T	C	19: 39,018,667	I169T	probably benign	Het
Cyp4a31	T	C	4: 115,574,920	L418P	possibly damaging	Het
Efcab7	T	C	4: 99,829,390		probably benign	Het
Efcab8	T	C	2: 153,810,268	W466R	possibly damaging	Het
Ehd3	C	A	17: 73,805,413	N57K	probably benign	Het
Ern2	C	A	7: 122,173,272	K654N	probably damaging	Het
Fbxo18	A	T	2: 11,748,446	F879L	probably benign	Het
Gde1	T	C	7: 118,691,781	D92G	probably null	Het
Gm4788	A	T	1: 139,753,011	C256*	probably null	Het
Heatr5b	A	G	17: 78,803,434	V995A	probably damaging	Het
Ifrd2	A	G	9: 107,592,091	E346G	probably damaging	Het
Ism1	AACGGACCCGTTCTTGTGGCTATGCA	AA	2: 139,746,042		probably benign	Het
Itgb4	T	C	11: 115,998,137	V1102A	possibly damaging	Het
Itgb6	A	T	2: 60,605,276	I710N	probably damaging	Het
Kif1a	T	C	1: 93,019,983	K1578E	probably damaging	Het
Kif9	T	C	9: 110,517,834		probably null	Het
Kitl	T	C	10: 100,089,233	*57Q	probably null	Het
Lrat	C	A	3: 82,903,505	V70F	probably damaging	Het
Lrrc9	T	A	12: 72,487,023	M1022K	probably benign	Het
Muc16	T	C	9: 18,655,599	T1875A	unknown	Het
Mup4	T	A	4: 59,957,890	N171I	probably damaging	Het
Npas4	G	A	19: 4,986,375	T587I	probably damaging	Het
Oas3	A	G	5: 120,771,230	V217A	probably benign	Het
Olfr786	A	G	10: 129,437,688	N292S	possibly damaging	Het
Osbp	C	A	19: 11,977,953	A323D	possibly damaging	Het
Panx2	G	A	15: 89,067,618	R96H	probably damaging	Het
Pcdhb18	G	A	18: 37,490,484	R289Q	probably benign	Het
Piezo2	T	C	18: 63,121,270	R385G	possibly damaging	Het
Pkn2	T	C	3: 142,811,599	T476A	probably damaging	Het
Plekha4	T	C	7: 45,553,802		probably benign	Het
Ppfibp2	T	C	7: 107,681,762	S94P	probably damaging	Het
Pramel7	T	A	2: 87,489,663	I429L	probably benign	Het
Rif1	A	G	2: 52,085,053	K325E	probably damaging	Het
Ror2	T	C	13: 53,110,542	Y826C	probably damaging	Het
Rsph10b	G	A	5: 143,959,746	G19R	probably damaging	Het
Slc20a1	A	G	2: 129,208,004	N361D	probably damaging	Het
Slc26a9	A	G	1: 131,763,909	D630G	probably benign	Het
Smtnl2	G	A	11: 72,401,399	A274V	probably damaging	Het
Trank1	T	C	9: 111,352,246		probably null	Het
Tspan10	T	A	11: 120,444,542	C159*	probably null	Het
Uba6	G	A	5: 86,164,765	T23I	probably benign	Het
Vmn2r74	T	C	7: 85,952,451	T660A	possibly damaging	Het
Vwa5b1	T	C	4: 138,578,672	N905S	probably benign	Het
Zfp831	T	C	2: 174,646,421	L963P	possibly damaging	Het

Other mutations in Zfp990

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00841:Zfp990	APN	4	145537868	missense	probably damaging	0.99
IGL01774:Zfp990	APN	4	145536948	missense	probably benign	0.28
IGL01895:Zfp990	APN	4	145536857	missense	probably damaging	0.97
IGL01895:Zfp990	APN	4	145536858	missense	probably damaging	0.99
IGL02349:Zfp990	APN	4	145530877	utr 5 prime	probably benign
IGL02598:Zfp990	APN	4	145536963	missense	possibly damaging	0.67
IGL02940:Zfp990	APN	4	145534922	splice site	probably null
IGL03026:Zfp990	APN	4	145537110	missense	possibly damaging	0.54
R0007:Zfp990	UTSW	4	145537438	missense	probably benign	0.00
R0352:Zfp990	UTSW	4	145536604	missense	probably damaging	0.99
R0631:Zfp990	UTSW	4	145537302	missense	possibly damaging	0.89
R1490:Zfp990	UTSW	4	145537283	missense	probably benign	0.44
R1537:Zfp990	UTSW	4	145536996	missense	possibly damaging	0.67
R1832:Zfp990	UTSW	4	145538210	missense	possibly damaging	0.51
R1956:Zfp990	UTSW	4	145534882	missense	probably damaging	1.00
R1982:Zfp990	UTSW	4	145536869	missense	probably damaging	0.99
R2024:Zfp990	UTSW	4	145537404	missense	possibly damaging	0.69
R2097:Zfp990	UTSW	4	145537322	missense	possibly damaging	0.94
R2235:Zfp990	UTSW	4	145537891	missense	probably damaging	0.99
R4194:Zfp990	UTSW	4	145536977	splice site	probably null
R4195:Zfp990	UTSW	4	145536977	splice site	probably null
R4418:Zfp990	UTSW	4	145536728	missense	possibly damaging	0.87
R4617:Zfp990	UTSW	4	145537046	missense	possibly damaging	0.59
R4736:Zfp990	UTSW	4	145536942	missense	possibly damaging	0.95
R4880:Zfp990	UTSW	4	145537920	missense	probably benign
R4941:Zfp990	UTSW	4	145536837	missense	probably damaging	1.00
R5014:Zfp990	UTSW	4	145538099	missense	possibly damaging	0.93
R5945:Zfp990	UTSW	4	145538043	missense	probably damaging	0.98
R6238:Zfp990	UTSW	4	145537913	missense	probably damaging	1.00
R6267:Zfp990	UTSW	4	145538103	missense	possibly damaging	0.59
R6296:Zfp990	UTSW	4	145538103	missense	possibly damaging	0.59
R6412:Zfp990	UTSW	4	145537568	missense	probably benign	0.00
R6616:Zfp990	UTSW	4	145537145	missense	probably benign	0.01
R6701:Zfp990	UTSW	4	145538178	missense	probably benign	0.45
R6720:Zfp990	UTSW	4	145536927	missense	possibly damaging	0.67
R7015:Zfp990	UTSW	4	145536635	missense	probably damaging	0.99
R7487:Zfp990	UTSW	4	145537587	missense	probably damaging	1.00
R7722:Zfp990	UTSW	4	145536962	missense	possibly damaging	0.86
R8749:Zfp990	UTSW	4	145537586	missense	probably damaging	0.96
R8785:Zfp990	UTSW	4	145537676	missense	probably benign	0.00
R9161:Zfp990	UTSW	4	145534939	missense	possibly damaging	0.71
R9211:Zfp990	UTSW	4	145537601	missense	probably damaging	0.98
Z1176:Zfp990	UTSW	4	145536811	missense	probably damaging	0.97

Predicted Primers

PCR Primer
(F):5'- AAGCAGTCTGAGAATTCATCAGAGAAT -3'
(R):5'- CCAAGATGGGATTTTCGGGTAA -3'

Sequencing Primer
(F):5'- TTCATCAGAGAATTCATACAGGAGAG -3'
(R):5'- CGGGTAAAGCATTTGTCACATTCAC -3'

Posted On

2018-02-28