Mutagenetix > Incidental Mutation

Incidental Mutation 'R6153:Tprkb'

506197

Institutional Source

Beutler Lab

Gene Symbol

Tprkb

Ensembl Gene

ENSMUSG00000054226

Gene Name

Tp53rk binding protein

Synonyms

0610033G21Rik, 1810034M08Rik, DRWMS1

MMRRC Submission

044300-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.206) question?

Stock #

R6153 (G1)

Quality Score

76.0756

Status

Validated

Chromosome

Chromosomal Location

85888847-85907266 bp(+) (GRCm39)

Type of Mutation

splice site (83 bp from exon)

DNA Base Change (assembly)

T to A at 85893172 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Ref Sequence

ENSEMBL: ENSMUSP00000117259 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000067137] [ENSMUST00000089570] [ENSMUST00000113751] [ENSMUST00000113752] [ENSMUST00000113753] [ENSMUST00000149026] [ENSMUST00000200680] [ENSMUST00000201939] [ENSMUST00000202803] [ENSMUST00000161198] [ENSMUST00000174369]

AlphaFold

Q8QZZ7

Predicted Effect

probably benign
Transcript: ENSMUST00000067137

SMART Domains

Protein: ENSMUSP00000063927
Gene: ENSMUSG00000054226

Domain	Start	End	E-Value	Type
Pfam:CGI-121	20	172	1.2e-45	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000089570

SMART Domains

Protein: ENSMUSP00000086998
Gene: ENSMUSG00000054226

Domain	Start	End	E-Value	Type
Pfam:CGI-121	20	150	8.6e-39	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000113751

SMART Domains

Protein: ENSMUSP00000109380
Gene: ENSMUSG00000054226

Domain	Start	End	E-Value	Type
Pfam:CGI-121	20	91	1.2e-23	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000113752

SMART Domains

Protein: ENSMUSP00000109381
Gene: ENSMUSG00000054226

Domain	Start	End	E-Value	Type
Pfam:CGI-121	20	172	1.3e-47	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000113753

SMART Domains

Protein: ENSMUSP00000109382
Gene: ENSMUSG00000054226

Domain	Start	End	E-Value	Type
Pfam:CGI-121	20	172	1.2e-45	PFAM

Predicted Effect

probably null
Transcript: ENSMUST00000149026

SMART Domains

Protein: ENSMUSP00000117259
Gene: ENSMUSG00000054226

Domain	Start	End	E-Value	Type
Pfam:CGI-121	20	132	1.4e-36	PFAM

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000150249

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000202900

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000201289

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000172982

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000202588

Predicted Effect

probably benign
Transcript: ENSMUST00000200680

SMART Domains

Protein: ENSMUSP00000144160
Gene: ENSMUSG00000054226

Domain	Start	End	E-Value	Type
Pfam:CGI-121	20	172	1.3e-47	PFAM

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000201217

Predicted Effect

probably benign
Transcript: ENSMUST00000201939

SMART Domains

Protein: ENSMUSP00000144588
Gene: ENSMUSG00000054226

Domain	Start	End	E-Value	Type
Pfam:CGI-121	20	110	9.4e-25	PFAM

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000202142

Predicted Effect

probably benign
Transcript: ENSMUST00000202803

SMART Domains

Protein: ENSMUSP00000144660
Gene: ENSMUSG00000054226

Domain	Start	End	E-Value	Type
Pfam:CGI-121	20	149	1.6e-40	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000161198

SMART Domains

Protein: ENSMUSP00000124488
Gene: ENSMUSG00000057103

Domain	Start	End	E-Value	Type
transmembrane domain	53	84	N/A	INTRINSIC
Pfam:Acetyltransf_10	85	203	2.1e-10	PFAM
Pfam:Acetyltransf_7	115	205	1e-12	PFAM
Pfam:Acetyltransf_1	122	204	1e-13	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000174369

SMART Domains

Protein: ENSMUSP00000133475
Gene: ENSMUSG00000057103

Domain	Start	End	E-Value	Type
transmembrane domain	53	84	N/A	INTRINSIC

Meta Mutation Damage Score

0.9755

Coding Region Coverage

1x: 99.9%
3x: 99.6%
10x: 98.0%
20x: 94.3%

Validation Efficiency

99% (66/67)

Allele List at MGI

Other mutations in this stock

Total: 63 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abca13	G	T	11: 9,251,259 (GRCm39)		probably null	Het
Ache	T	C	5: 137,290,117 (GRCm39)	I394T	probably damaging	Het
Acsm1	G	A	7: 119,232,289 (GRCm39)	G62D	probably damaging	Het
Actrt3	T	A	3: 30,653,899 (GRCm39)	I34F	probably damaging	Het
Adgrf5	T	C	17: 43,761,974 (GRCm39)	I1223T	possibly damaging	Het
Adora2a	T	C	10: 75,161,981 (GRCm39)	F40S	possibly damaging	Het
Ano8	T	C	8: 71,933,441 (GRCm39)		probably benign	Het
Arid1b	T	A	17: 5,293,107 (GRCm39)	L675Q	probably damaging	Het
Atg2b	T	C	12: 105,589,741 (GRCm39)	I1837V	possibly damaging	Het
Atp10b	A	G	11: 43,145,109 (GRCm39)	Y1284C	probably damaging	Het
B3gnt7	G	T	1: 86,233,237 (GRCm39)	G44V	probably damaging	Het
Chrna1	G	T	2: 73,403,653 (GRCm39)	H99N	probably benign	Het
Cnksr1	T	C	4: 133,961,204 (GRCm39)	H220R	probably damaging	Het
Cpsf2	T	A	12: 101,965,619 (GRCm39)		probably null	Het
Daglb	T	C	5: 143,489,096 (GRCm39)	L651P	probably benign	Het
Ddx60	A	G	8: 62,398,974 (GRCm39)	D231G	possibly damaging	Het
Ehd4	A	C	2: 119,932,904 (GRCm39)	F174C	probably damaging	Het
Emsy	G	T	7: 98,260,060 (GRCm39)	P9T	probably damaging	Het
Fnbp1l	T	C	3: 122,352,805 (GRCm39)	E217G	probably benign	Het
Gm11596	A	T	11: 99,683,524 (GRCm39)	C199S	unknown	Het
Gmps	T	G	3: 63,908,964 (GRCm39)	C489G	probably benign	Het
Gpsm1	T	C	2: 26,215,425 (GRCm39)	Y296H	probably benign	Het
Heatr5b	T	C	17: 79,138,870 (GRCm39)	T91A	possibly damaging	Het
Hs3st3b1	A	T	11: 63,780,324 (GRCm39)	W268R	probably damaging	Het
Il27ra	T	C	8: 84,758,773 (GRCm39)		probably null	Het
Itga5	T	A	15: 103,265,880 (GRCm39)	I156F	probably damaging	Het
Kcnmb3	T	A	3: 32,527,976 (GRCm39)	D96V	probably damaging	Het
Khdrbs1	T	A	4: 129,609,965 (GRCm39)	N417Y	probably damaging	Het
Loxhd1	A	G	18: 77,383,454 (GRCm39)	N118D	possibly damaging	Het
Mdm4	A	G	1: 132,919,845 (GRCm39)	L341P	probably damaging	Het
Mecom	T	C	3: 30,047,797 (GRCm39)	E225G	possibly damaging	Het
Megf8	G	A	7: 25,046,796 (GRCm39)	G1560S	possibly damaging	Het
Mfsd13a	A	T	19: 46,356,321 (GRCm39)	D142V	probably damaging	Het
Muc5b	A	T	7: 141,415,181 (GRCm39)	Y2709F	possibly damaging	Het
Nelfa	A	T	5: 34,056,223 (GRCm39)	I480N	probably damaging	Het
Or10ak8	G	A	4: 118,773,944 (GRCm39)	S240F	probably damaging	Het
Or8b36	ATTGCTGTTT	ATTGCTGTTTGCTGTTT	9: 37,937,836 (GRCm39)		probably null	Het
Palld	G	T	8: 62,003,186 (GRCm39)	N304K	probably damaging	Het
Pcsk5	A	G	19: 17,488,856 (GRCm39)	L988P	probably damaging	Het
Prmt1	A	T	7: 44,631,251 (GRCm39)	F34I	probably damaging	Het
Pzp	A	G	6: 128,465,979 (GRCm39)	S1234P	probably benign	Het
Ralb	A	T	1: 119,405,870 (GRCm39)		probably null	Het
Robo2	T	A	16: 73,717,617 (GRCm39)	D141V	probably damaging	Het
Rsrc1	T	C	3: 67,262,895 (GRCm39)	I283T	probably benign	Het
Sec62	A	T	3: 30,864,631 (GRCm39)	K165M	unknown	Het
Sez6	A	G	11: 77,868,648 (GRCm39)	D974G	probably damaging	Het
Shc2	T	A	10: 79,465,752 (GRCm39)	I187F	possibly damaging	Het
Shroom3	G	A	5: 93,112,267 (GRCm39)	R1876Q	probably damaging	Het
Siglecg	C	A	7: 43,061,441 (GRCm39)	N481K	possibly damaging	Het
Skil	T	A	3: 31,152,002 (GRCm39)	F175I	probably damaging	Het
Slc1a1	T	C	19: 28,886,935 (GRCm39)	V432A	probably damaging	Het
Slit3	G	T	11: 35,591,310 (GRCm39)	G1374V	possibly damaging	Het
Snx14	T	C	9: 88,273,859 (GRCm39)	Y644C	probably damaging	Het
Snx33	T	A	9: 56,833,983 (GRCm39)	I29F	possibly damaging	Het
Sos1	T	A	17: 80,756,764 (GRCm39)	I263L	probably benign	Het
Susd2	C	T	10: 75,473,853 (GRCm39)	A581T	probably damaging	Het
Tbpl2	C	A	2: 23,966,028 (GRCm39)	V320F	probably damaging	Het
Tmem209	A	G	6: 30,505,794 (GRCm39)	S171P	probably benign	Het
Tspan11	G	A	6: 127,916,061 (GRCm39)	S119N	probably benign	Het
Ulk2	A	T	11: 61,672,572 (GRCm39)	V922D	probably damaging	Het
Zfp267	A	G	3: 36,219,303 (GRCm39)	H442R	possibly damaging	Het
Zfp976	A	C	7: 42,263,610 (GRCm39)	Y76D	probably damaging	Het
Zkscan2	G	A	7: 123,088,993 (GRCm39)	T426I	probably benign	Het

Other mutations in Tprkb

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL02133:Tprkb	APN	6	85,904,893 (GRCm39)	missense	probably benign	0.00
IGL02981:Tprkb	APN	6	85,904,861 (GRCm39)	missense	probably benign	0.01
IGL03102:Tprkb	APN	6	85,901,400 (GRCm39)	missense	probably benign	0.04
F5770:Tprkb	UTSW	6	85,905,764 (GRCm39)	missense	probably damaging	0.96
R0491:Tprkb	UTSW	6	85,901,446 (GRCm39)	missense	probably benign	0.02
R1456:Tprkb	UTSW	6	85,901,403 (GRCm39)	missense	probably damaging	0.97
R2007:Tprkb	UTSW	6	85,910,030 (GRCm39)	unclassified	probably benign
R2088:Tprkb	UTSW	6	85,909,922 (GRCm39)	unclassified	probably benign
R3960:Tprkb	UTSW	6	85,905,783 (GRCm39)	missense	probably benign	0.02
R7584:Tprkb	UTSW	6	85,905,809 (GRCm39)	missense	probably benign
V7581:Tprkb	UTSW	6	85,905,764 (GRCm39)	missense	probably damaging	0.96
V7582:Tprkb	UTSW	6	85,905,764 (GRCm39)	missense	probably damaging	0.96
V7583:Tprkb	UTSW	6	85,905,764 (GRCm39)	missense	probably damaging	0.96
X0064:Tprkb	UTSW	6	85,905,784 (GRCm39)	missense	probably benign
X0064:Tprkb	UTSW	6	85,905,782 (GRCm39)	missense	probably benign	0.39

Predicted Primers

PCR Primer
(F):5'- CAGTTTTGCGGGCGAAGTAC -3'
(R):5'- TGTCACAAGCACTGCCATC -3'

Sequencing Primer
(F):5'- AAGTACGCGTGCCTTTGC -3'
(R):5'- AAGCACTGCCATCACCTCTTATC -3'

Posted On

2018-03-08