Incidental Mutation 'R6364:Trim34b'
ID 513413
Institutional Source Beutler Lab
Gene Symbol Trim34b
Ensembl Gene ENSMUSG00000090215
Gene Name tripartite motif-containing 34B
Synonyms Trim34-2, Gm15134
MMRRC Submission 044514-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.180) question?
Stock # R6364 (G1)
Quality Score 225.009
Status Validated
Chromosome 7
Chromosomal Location 103978678-103986116 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to C at 103985733 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Phenylalanine to Serine at position 456 (F456S)
Ref Sequence ENSEMBL: ENSMUSP00000136926 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000059037] [ENSMUST00000106847] [ENSMUST00000130139] [ENSMUST00000180136]
AlphaFold J3QNR8
Predicted Effect probably benign
Transcript: ENSMUST00000059037
SMART Domains Protein: ENSMUSP00000060100
Gene: ENSMUSG00000057143

DomainStartEndE-ValueType
RING 15 58 5.51e-7 SMART
BBOX 91 132 4.83e-12 SMART
low complexity region 196 209 N/A INTRINSIC
Pfam:SPRY 351 493 8.7e-14 PFAM
Predicted Effect probably damaging
Transcript: ENSMUST00000106847
AA Change: F456S

PolyPhen 2 Score 0.991 (Sensitivity: 0.71; Specificity: 0.97)
SMART Domains Protein: ENSMUSP00000102460
Gene: ENSMUSG00000090215
AA Change: F456S

DomainStartEndE-ValueType
RING 15 58 7.8e-7 SMART
ZnF_RBZ 31 61 5.96e-1 SMART
BBOX 91 132 2.15e-9 SMART
low complexity region 195 209 N/A INTRINSIC
Blast:PRY 299 343 3e-21 BLAST
Pfam:SPRY 347 474 7.8e-12 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000130139
SMART Domains Protein: ENSMUSP00000116775
Gene: ENSMUSG00000057143

DomainStartEndE-ValueType
RING 15 58 5.51e-7 SMART
BBOX 91 132 4.83e-12 SMART
low complexity region 196 209 N/A INTRINSIC
Predicted Effect probably damaging
Transcript: ENSMUST00000180136
AA Change: F456S

PolyPhen 2 Score 0.991 (Sensitivity: 0.71; Specificity: 0.97)
SMART Domains Protein: ENSMUSP00000136926
Gene: ENSMUSG00000090215
AA Change: F456S

DomainStartEndE-ValueType
RING 15 58 7.8e-7 SMART
ZnF_RBZ 31 61 5.96e-1 SMART
BBOX 91 132 2.15e-9 SMART
low complexity region 195 209 N/A INTRINSIC
Blast:PRY 299 343 2e-21 BLAST
Pfam:SPRY 345 484 3e-20 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000184402
Meta Mutation Damage Score 0.8248 question?
Coding Region Coverage
  • 1x: 99.9%
  • 3x: 99.5%
  • 10x: 97.7%
  • 20x: 92.8%
Validation Efficiency 99% (69/70)
Allele List at MGI
Other mutations in this stock
Total: 72 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Adamts3 T C 5: 89,869,673 (GRCm39) Y234C possibly damaging Het
Ambra1 C A 2: 91,603,661 (GRCm39) H548Q possibly damaging Het
Ap3d1 T C 10: 80,546,328 (GRCm39) probably null Het
Apol11b A G 15: 77,522,258 (GRCm39) V13A possibly damaging Het
Arhgdib C T 6: 136,909,253 (GRCm39) probably null Het
B3galt1 T A 2: 67,949,016 (GRCm39) S244T probably damaging Het
Bace2 A G 16: 97,214,633 (GRCm39) I274V probably benign Het
Bfsp2 A T 9: 103,325,827 (GRCm39) V272D probably damaging Het
Blm A T 7: 80,144,274 (GRCm39) C782* probably null Het
Cfi G A 3: 129,666,495 (GRCm39) S406N probably benign Het
Chd1l G A 3: 97,494,483 (GRCm39) A399V probably damaging Het
Cic C A 7: 24,972,248 (GRCm39) H660N possibly damaging Het
Cops3 A G 11: 59,726,230 (GRCm39) probably benign Het
Dlec1 G A 9: 118,950,939 (GRCm39) V502I possibly damaging Het
Dync2i1 A T 12: 116,205,352 (GRCm39) D412E probably damaging Het
Epop A G 11: 97,519,513 (GRCm39) S199P probably benign Het
Evi5 G T 5: 107,989,979 (GRCm39) P80Q probably damaging Het
Faf1 T C 4: 109,818,997 (GRCm39) V623A possibly damaging Het
Fam83c T C 2: 155,676,443 (GRCm39) D109G probably damaging Het
Fam83d T C 2: 158,625,179 (GRCm39) probably null Het
Flacc1 G T 1: 58,697,531 (GRCm39) A403D probably damaging Het
Foxn3 T C 12: 99,354,952 (GRCm39) N71D probably benign Het
Gm7298 A G 6: 121,756,402 (GRCm39) R1016G possibly damaging Het
Grin2d T C 7: 45,507,878 (GRCm39) E396G possibly damaging Het
Htra2 C A 6: 83,030,027 (GRCm39) V311F probably damaging Het
Kif6 A T 17: 49,927,651 (GRCm39) T33S probably benign Het
Kmt2c T C 5: 25,514,634 (GRCm39) I3070V probably null Het
Krtap5-2 A T 7: 141,728,800 (GRCm39) C293* probably null Het
Lrp3 T A 7: 34,903,134 (GRCm39) D404V probably benign Het
LTO1 A G 7: 144,473,005 (GRCm39) D105G probably benign Het
Mc2r T G 18: 68,540,607 (GRCm39) I229L probably benign Het
Mtnr1b A G 9: 15,774,300 (GRCm39) M253T possibly damaging Het
Nfat5 A G 8: 108,094,909 (GRCm39) N531S probably benign Het
Niban3 G A 8: 72,051,733 (GRCm39) G23S probably benign Het
Npr2 T A 4: 43,643,622 (GRCm39) I550N probably damaging Het
Npy6r T C 18: 44,409,578 (GRCm39) I333T possibly damaging Het
Nup88 C T 11: 70,838,612 (GRCm39) R468Q probably benign Het
Nup98 G A 7: 101,825,522 (GRCm39) T422I probably damaging Het
Or10aa1 T A 1: 173,869,778 (GRCm39) H87Q possibly damaging Het
Otud4 A G 8: 80,372,970 (GRCm39) N96S probably damaging Het
Paqr6 T C 3: 88,273,265 (GRCm39) F86L probably damaging Het
Ppp4r3b A T 11: 29,138,035 (GRCm39) T90S probably benign Het
Ptbp2 A T 3: 119,534,091 (GRCm39) N23K probably damaging Het
Ralgapb G T 2: 158,304,029 (GRCm39) G596V probably damaging Het
Rdm1 G A 11: 101,521,068 (GRCm39) R94H probably benign Het
Rergl A T 6: 139,477,746 (GRCm39) F28I probably damaging Het
Rif1 G T 2: 51,997,681 (GRCm39) S1000I probably damaging Het
Rnf141 C T 7: 110,420,516 (GRCm39) A163T possibly damaging Het
Scaf4 G A 16: 90,057,136 (GRCm39) Q72* probably null Het
Sdk1 G T 5: 141,948,464 (GRCm39) S603I probably benign Het
Sdsl T C 5: 120,598,674 (GRCm39) I147M probably damaging Het
Serpina6 T C 12: 103,620,495 (GRCm39) N85D probably benign Het
Serpinf2 A G 11: 75,327,315 (GRCm39) I204T probably damaging Het
Shank2 A G 7: 143,964,146 (GRCm39) S795G probably benign Het
Simc1 C T 13: 54,672,413 (GRCm39) Q254* probably null Het
Slc30a3 G A 5: 31,246,083 (GRCm39) P216S possibly damaging Het
Smim14 T A 5: 65,610,639 (GRCm39) I53F probably benign Het
Sp3 T C 2: 72,801,285 (GRCm39) T243A probably benign Het
Srpk2 A G 5: 23,745,465 (GRCm39) F164L probably damaging Het
Stard9 T C 2: 120,543,910 (GRCm39) F4403L probably damaging Het
Tbc1d30 T C 10: 121,130,630 (GRCm39) T267A possibly damaging Het
Tgm7 T A 2: 120,926,878 (GRCm39) R424* probably null Het
Tmbim6 T C 15: 99,304,066 (GRCm39) L113P probably damaging Het
Tmcc1 G A 6: 116,020,722 (GRCm39) probably benign Het
Tomm7 A G 5: 24,049,028 (GRCm39) L15P probably damaging Het
Tpcn1 T C 5: 120,691,875 (GRCm39) Y263C probably damaging Het
Uox C T 3: 146,330,332 (GRCm39) R163* probably null Het
Vmn2r108 A G 17: 20,691,260 (GRCm39) I421T probably benign Het
Wdr43 A G 17: 71,964,649 (GRCm39) E676G probably damaging Het
Zcchc14 G T 8: 122,331,598 (GRCm39) probably benign Het
Zfp64 C A 2: 168,754,186 (GRCm39) G25V probably damaging Het
Zswim8 C A 14: 20,763,079 (GRCm39) P326H probably damaging Het
Other mutations in Trim34b
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00975:Trim34b APN 7 103,978,859 (GRCm39) nonsense probably null
IGL01103:Trim34b APN 7 103,979,106 (GRCm39) missense probably damaging 1.00
IGL02252:Trim34b APN 7 103,979,139 (GRCm39) missense probably damaging 0.98
IGL03241:Trim34b APN 7 103,983,820 (GRCm39) intron probably benign
R0032:Trim34b UTSW 7 103,985,784 (GRCm39) missense possibly damaging 0.61
R0381:Trim34b UTSW 7 103,979,062 (GRCm39) missense probably damaging 1.00
R2403:Trim34b UTSW 7 103,978,876 (GRCm39) missense probably benign
R2520:Trim34b UTSW 7 103,980,446 (GRCm39) missense probably damaging 1.00
R2857:Trim34b UTSW 7 103,985,439 (GRCm39) missense probably benign 0.00
R2859:Trim34b UTSW 7 103,985,439 (GRCm39) missense probably benign 0.00
R3077:Trim34b UTSW 7 103,980,508 (GRCm39) missense possibly damaging 0.89
R4094:Trim34b UTSW 7 103,983,795 (GRCm39) missense probably benign
R4449:Trim34b UTSW 7 103,984,935 (GRCm39) missense probably benign 0.00
R5183:Trim34b UTSW 7 103,979,118 (GRCm39) missense possibly damaging 0.92
R5700:Trim34b UTSW 7 103,985,618 (GRCm39) missense probably damaging 1.00
R5759:Trim34b UTSW 7 103,980,640 (GRCm39) missense possibly damaging 0.46
R6236:Trim34b UTSW 7 103,985,525 (GRCm39) missense probably damaging 0.99
R7034:Trim34b UTSW 7 103,978,743 (GRCm39) start gained probably benign
R7036:Trim34b UTSW 7 103,978,743 (GRCm39) start gained probably benign
R7237:Trim34b UTSW 7 103,978,794 (GRCm39) missense possibly damaging 0.80
R7392:Trim34b UTSW 7 103,985,604 (GRCm39) missense probably benign 0.00
R7405:Trim34b UTSW 7 103,985,690 (GRCm39) missense probably damaging 1.00
R7516:Trim34b UTSW 7 103,978,918 (GRCm39) missense probably damaging 1.00
R7646:Trim34b UTSW 7 103,984,559 (GRCm39) missense probably damaging 0.97
R7909:Trim34b UTSW 7 103,979,731 (GRCm39) missense probably benign 0.01
R8396:Trim34b UTSW 7 103,979,083 (GRCm39) missense probably damaging 1.00
R8472:Trim34b UTSW 7 103,980,545 (GRCm39) missense probably benign 0.00
R8806:Trim34b UTSW 7 103,985,319 (GRCm39) missense probably damaging 1.00
R9476:Trim34b UTSW 7 103,980,503 (GRCm39) missense probably damaging 1.00
R9510:Trim34b UTSW 7 103,980,503 (GRCm39) missense probably damaging 1.00
R9645:Trim34b UTSW 7 103,980,474 (GRCm39) missense probably benign 0.12
Z1176:Trim34b UTSW 7 103,984,521 (GRCm39) missense probably damaging 1.00
Z1177:Trim34b UTSW 7 103,980,560 (GRCm39) missense possibly damaging 0.79
Predicted Primers PCR Primer
(F):5'- AAGGTCAGCCAAATGGTTACCAC -3'
(R):5'- CTGAACAGCACAGGTCCATC -3'

Sequencing Primer
(F):5'- CCACAGAATGGCTACTGGGTTATAG -3'
(R):5'- GGTCCATCCACACGGTAAG -3'
Posted On 2018-04-27