Mutagenetix > Incidental Mutation

Incidental Mutation 'R6339:Stk33'

513819

Institutional Source

Beutler Lab

Gene Symbol

Stk33

Ensembl Gene

ENSMUSG00000031027

Gene Name

serine/threonine kinase 33

Synonyms

4921505G21Rik

MMRRC Submission

044493-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.065) question?

Stock #

R6339 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

108878430-109038288 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to T at 108920672 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Aspartic acid to Glutamic Acid at position 348 (D348E)

Ref Sequence

ENSEMBL: ENSMUSP00000112515 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000090414] [ENSMUST00000106745] [ENSMUST00000121378] [ENSMUST00000121748] [ENSMUST00000141210]

AlphaFold

Q924X7

Predicted Effect

probably benign
Transcript: ENSMUST00000090414
AA Change: D348E

PolyPhen 2 Score 0.030 (Sensitivity: 0.95; Specificity: 0.82)

SMART Domains

Protein: ENSMUSP00000087897
Gene: ENSMUSG00000031027
AA Change: D348E

Domain	Start	End	E-Value	Type
S_TKc	111	377	4.7e-102	SMART
low complexity region	399	414	N/A	INTRINSIC
low complexity region	445	467	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000106745
AA Change: D348E

PolyPhen 2 Score 0.030 (Sensitivity: 0.95; Specificity: 0.82)

SMART Domains

Protein: ENSMUSP00000102356
Gene: ENSMUSG00000031027
AA Change: D348E

Domain	Start	End	E-Value	Type
S_TKc	111	377	4.7e-102	SMART
low complexity region	399	414	N/A	INTRINSIC
low complexity region	445	467	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000121378
AA Change: D225E

PolyPhen 2 Score 0.014 (Sensitivity: 0.96; Specificity: 0.79)

SMART Domains

Protein: ENSMUSP00000112560
Gene: ENSMUSG00000031027
AA Change: D225E

Domain	Start	End	E-Value	Type
S_TKc	2	254	1.01e-83	SMART
low complexity region	276	291	N/A	INTRINSIC
low complexity region	322	344	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000121748
AA Change: D348E

PolyPhen 2 Score 0.030 (Sensitivity: 0.95; Specificity: 0.82)

SMART Domains

Protein: ENSMUSP00000112515
Gene: ENSMUSG00000031027
AA Change: D348E

Domain	Start	End	E-Value	Type
S_TKc	111	377	4.8e-102	SMART
low complexity region	399	414	N/A	INTRINSIC
low complexity region	445	467	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000141210

Meta Mutation Damage Score

0.0898

Coding Region Coverage

1x: 100.0%
3x: 99.7%
10x: 98.2%
20x: 94.1%

Validation Efficiency

97% (69/71)

Allele List at MGI

Other mutations in this stock

Total: 71 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
4933424G06Rik	A	T	1: 36,749,542 (GRCm39)		probably benign	Het
Adgrg6	G	T	10: 14,310,091 (GRCm39)	S743R	probably damaging	Het
Ak8	A	G	2: 28,624,460 (GRCm39)		probably null	Het
Alpk2	A	G	18: 65,482,877 (GRCm39)	M377T	probably benign	Het
Ap1g1	G	A	8: 110,571,000 (GRCm39)	V425I	possibly damaging	Het
Apob	A	T	12: 8,066,188 (GRCm39)	R4353W	probably damaging	Het
Arhgef38	T	C	3: 132,839,423 (GRCm39)	K540R	probably benign	Het
B3galt2	A	T	1: 143,522,640 (GRCm39)	T259S	possibly damaging	Het
Btbd8	G	A	5: 107,651,583 (GRCm39)	V159I	probably benign	Het
C2cd2l	T	C	9: 44,224,788 (GRCm39)		probably benign	Het
Carmil3	T	C	14: 55,737,306 (GRCm39)	V763A	possibly damaging	Het
Ccdc171	A	T	4: 83,661,234 (GRCm39)	T1115S	probably damaging	Het
Chst2	C	T	9: 95,287,803 (GRCm39)	G181D	probably damaging	Het
Col7a1	C	T	9: 108,785,701 (GRCm39)	T390M	unknown	Het
Cpt1a	A	C	19: 3,412,152 (GRCm39)	D208A	probably benign	Het
Crocc2	A	G	1: 93,141,754 (GRCm39)	E1183G	probably benign	Het
Defa39	G	A	8: 22,193,485 (GRCm39)	S45F	possibly damaging	Het
Dlg5	T	A	14: 24,208,128 (GRCm39)	H1003L	probably damaging	Het
Dok2	A	T	14: 71,013,158 (GRCm39)	I109L	probably benign	Het
Dpy19l4	A	T	4: 11,285,111 (GRCm39)	I465K	probably damaging	Het
Dync1h1	A	T	12: 110,612,639 (GRCm39)	D2838V	probably damaging	Het
Frem3	A	G	8: 81,339,644 (GRCm39)	R646G	possibly damaging	Het
Gcfc2	T	A	6: 81,923,477 (GRCm39)	F514I	probably damaging	Het
Gm8104	T	C	14: 42,958,942 (GRCm39)	M44T	probably benign	Het
Golph3l	T	A	3: 95,524,750 (GRCm39)	W334R	probably damaging	Het
Gpr179	A	T	11: 97,235,002 (GRCm39)	F443I	probably damaging	Het
Ift172	A	G	5: 31,413,927 (GRCm39)	V1467A	probably benign	Het
Ift172	A	T	5: 31,444,289 (GRCm39)	D44E	probably damaging	Het
Il1rl1	C	T	1: 40,501,016 (GRCm39)	A464V	possibly damaging	Het
Irx5	A	G	8: 93,086,481 (GRCm39)	E188G	probably damaging	Het
Jak1	A	G	4: 101,019,123 (GRCm39)	V710A	probably damaging	Het
Kcng4	A	T	8: 120,359,693 (GRCm39)	F228I	probably damaging	Het
Lifr	A	G	15: 7,196,530 (GRCm39)	N238S	probably benign	Het
Ltbp3	C	A	19: 5,797,505 (GRCm39)	H414Q	probably damaging	Het
Mcpt8	A	G	14: 56,319,794 (GRCm39)	C219R	probably benign	Het
Mepce	A	T	5: 137,783,950 (GRCm39)	N125K	possibly damaging	Het
Mfap3	T	C	11: 57,420,598 (GRCm39)	F193S	probably damaging	Het
Miox	T	A	15: 89,219,702 (GRCm39)	Y63*	probably null	Het
Msl2	A	T	9: 100,978,949 (GRCm39)	H441L	probably benign	Het
Nemp2	T	A	1: 52,680,069 (GRCm39)	S98T	possibly damaging	Het
Neto2	G	T	8: 86,367,187 (GRCm39)	A547E	probably benign	Het
Nol12	T	C	15: 78,825,033 (GRCm39)		probably benign	Het
Npr3	T	C	15: 11,845,361 (GRCm39)	I504V	probably damaging	Het
Or4c106	A	G	2: 88,683,215 (GRCm39)	D307G	probably null	Het
Pcdhb3	T	C	18: 37,433,998 (GRCm39)		probably benign	Het
Pear1	C	A	3: 87,659,827 (GRCm39)	G720W	probably damaging	Het
Pibf1	T	G	14: 99,344,834 (GRCm39)	D151E	probably damaging	Het
Pla2g6	T	A	15: 79,193,016 (GRCm39)	N217I	probably damaging	Het
Plcd1	G	A	9: 118,904,059 (GRCm39)	R292C	probably damaging	Het
Plcl1	C	T	1: 55,735,474 (GRCm39)	L272F	probably damaging	Het
Ppp4r4	A	T	12: 103,571,228 (GRCm39)	K656*	probably null	Het
Prr22	G	A	17: 57,078,490 (GRCm39)	M214I	probably benign	Het
Ror1	G	T	4: 100,269,128 (GRCm39)	R322L	possibly damaging	Het
Sh3tc2	G	A	18: 62,108,642 (GRCm39)	W244*	probably null	Het
Slamf6	A	G	1: 171,775,615 (GRCm39)	N320S	probably null	Het
Slc1a6	A	C	10: 78,635,919 (GRCm39)	D328A	possibly damaging	Het
Sorl1	G	T	9: 41,881,038 (GRCm39)	T2161K	probably benign	Het
Spata31e2	T	A	1: 26,721,586 (GRCm39)	D1198V	probably benign	Het
Sstr2	T	C	11: 113,515,375 (GRCm39)	F98S	probably damaging	Het
Sulf1	T	A	1: 12,908,664 (GRCm39)	L559Q	probably damaging	Het
Syne2	A	G	12: 76,035,927 (GRCm39)	D3738G	probably benign	Het
Taok3	A	T	5: 117,366,095 (GRCm39)	Q382L	probably benign	Het
Tet2	T	A	3: 133,192,178 (GRCm39)	H752L	possibly damaging	Het
Tia1	A	C	6: 86,403,638 (GRCm39)	K285T	probably damaging	Het
Tle3	G	T	9: 61,309,206 (GRCm39)		probably null	Het
Top1mt	T	C	15: 75,537,505 (GRCm39)	T414A	possibly damaging	Het
Ubc	A	T	5: 125,464,406 (GRCm39)	I307N	probably damaging	Het
Vmn2r96	A	T	17: 18,804,124 (GRCm39)	D266V	possibly damaging	Het
Wbp2nl	G	T	15: 82,183,246 (GRCm39)	W13C	possibly damaging	Het
Zfp456	T	A	13: 67,510,483 (GRCm39)	K102*	probably null	Het
Zkscan1	T	C	5: 138,091,567 (GRCm39)	V100A	probably damaging	Het

Other mutations in Stk33

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01137:Stk33	APN	7	108,928,775 (GRCm39)	missense	probably benign	0.02
IGL01467:Stk33	APN	7	108,928,796 (GRCm39)	missense	probably damaging	0.99
IGL01558:Stk33	APN	7	108,940,491 (GRCm39)	intron	probably benign
IGL01775:Stk33	APN	7	108,911,574 (GRCm39)	missense	possibly damaging	0.92
R0052:Stk33	UTSW	7	108,878,876 (GRCm39)	missense	possibly damaging	0.46
R0336:Stk33	UTSW	7	108,930,681 (GRCm39)	missense	probably benign	0.01
R0394:Stk33	UTSW	7	108,940,696 (GRCm39)	missense	probably benign
R0579:Stk33	UTSW	7	108,924,904 (GRCm39)	missense	probably damaging	0.99
R0727:Stk33	UTSW	7	108,920,725 (GRCm39)	missense	probably damaging	0.96
R1363:Stk33	UTSW	7	108,879,028 (GRCm39)	missense	probably benign	0.06
R1574:Stk33	UTSW	7	108,879,027 (GRCm39)	missense	probably benign	0.01
R1574:Stk33	UTSW	7	108,879,027 (GRCm39)	missense	probably benign	0.01
R2153:Stk33	UTSW	7	108,940,527 (GRCm39)	missense	probably benign	0.01
R4366:Stk33	UTSW	7	108,879,002 (GRCm39)	missense	probably benign	0.06
R4896:Stk33	UTSW	7	108,926,802 (GRCm39)	missense	probably damaging	1.00
R4994:Stk33	UTSW	7	108,939,605 (GRCm39)	missense	probably benign	0.08
R5283:Stk33	UTSW	7	108,935,334 (GRCm39)	missense	possibly damaging	0.69
R6547:Stk33	UTSW	7	108,920,042 (GRCm39)	missense	possibly damaging	0.73
R6717:Stk33	UTSW	7	108,926,823 (GRCm39)	missense	possibly damaging	0.51
R6894:Stk33	UTSW	7	108,935,269 (GRCm39)	missense	possibly damaging	0.70
R8975:Stk33	UTSW	7	108,935,280 (GRCm39)	missense	probably damaging	1.00
R9168:Stk33	UTSW	7	108,928,747 (GRCm39)	missense	probably damaging	0.99
R9175:Stk33	UTSW	7	108,920,724 (GRCm39)	missense	probably damaging	1.00
R9204:Stk33	UTSW	7	108,940,686 (GRCm39)	missense	probably benign	0.00
R9416:Stk33	UTSW	7	108,940,689 (GRCm39)	missense	probably benign	0.39
Z1176:Stk33	UTSW	7	108,935,266 (GRCm39)	missense	possibly damaging	0.51

Predicted Primers

PCR Primer
(F):5'- TTCAAAGCAGCAAGTTTCCC -3'
(R):5'- ATCACTGCTTCCAAGTCCTATAG -3'

Sequencing Primer
(F):5'- GTTTTCTGGTGAAGATATCAC -3'
(R):5'- GGAAGTTGATTTGTGATAGTCTTACG -3'

Posted On

2018-04-27