Incidental Mutation 'R6381:Sdr9c7'
ID 515324
Institutional Source Beutler Lab
Gene Symbol Sdr9c7
Ensembl Gene ENSMUSG00000040127
Gene Name 4short chain dehydrogenase/reductase family 9C, member 7
Synonyms Sdro, SDR-O, Rdhs, 1810054F20Rik, Rdh20
MMRRC Submission
Accession Numbers
Is this an essential gene? Probably non essential (E-score: 0.064) question?
Stock # R6381 (G1)
Quality Score 225.009
Status Validated
Chromosome 10
Chromosomal Location 127898518-127911761 bp(+) (GRCm38)
Type of Mutation missense
DNA Base Change (assembly) T to A at 127903673 bp (GRCm38)
Zygosity Heterozygous
Amino Acid Change Methionine to Lysine at position 219 (M219K)
Ref Sequence ENSEMBL: ENSMUSP00000036628 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000047134]
AlphaFold Q8K3P0
Predicted Effect probably benign
Transcript: ENSMUST00000047134
AA Change: M219K

PolyPhen 2 Score 0.250 (Sensitivity: 0.91; Specificity: 0.88)
SMART Domains Protein: ENSMUSP00000036628
Gene: ENSMUSG00000040127
AA Change: M219K

DomainStartEndE-ValueType
Pfam:adh_short 26 217 3.2e-41 PFAM
Pfam:adh_short_C2 32 226 1.6e-8 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000149849
Predicted Effect noncoding transcript
Transcript: ENSMUST00000151614
Predicted Effect noncoding transcript
Transcript: ENSMUST00000155067
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 99.9%
  • 10x: 99.2%
  • 20x: 97.2%
Validation Efficiency 97% (56/58)
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a protein with similarity to the short-chain dehydrogenase/reductase (SDR) family but has not been shown to have retinoid or dehydrogenase activities. [provided by RefSeq, Apr 2010]
Allele List at MGI
Other mutations in this stock
Total: 56 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
4930503L19Rik T A 18: 70,467,717 M365L probably damaging Het
5330417C22Rik T C 3: 108,481,814 K222E possibly damaging Het
Aars2 A G 17: 45,518,545 E786G probably benign Het
Adamts12 G T 15: 11,256,994 V478F possibly damaging Het
Akr1c21 T A 13: 4,574,184 D12E probably damaging Het
Aplf A T 6: 87,658,977 M118K probably damaging Het
Apobec1 A G 6: 122,578,931 L189P probably damaging Het
BC061237 A G 14: 44,504,256 Q152R possibly damaging Het
Bche A G 3: 73,701,799 I98T probably benign Het
Cc2d2a G T 5: 43,715,776 R983L possibly damaging Het
Ccnd3 T C 17: 47,505,224 probably benign Het
Cd74 G T 18: 60,811,363 C215F probably damaging Het
Cep97 C T 16: 55,922,171 A138T probably damaging Het
Ces1e T A 8: 93,217,578 N204I probably damaging Het
Dicer1 T C 12: 104,696,462 D1620G probably benign Het
Dnah17 A G 11: 118,129,185 V12A probably benign Het
Dstyk T A 1: 132,456,765 probably null Het
Eml2 G A 7: 19,201,163 V432I probably damaging Het
Gm10570 G T 4: 130,308,228 probably benign Het
Gm7145 C T 1: 117,985,939 Q184* probably null Het
Gpat2 G C 2: 127,431,918 G294R possibly damaging Het
Gtse1 G A 15: 85,862,148 R55H probably benign Het
Hdac4 G T 1: 91,984,525 Q381K possibly damaging Het
Ifit3b T C 19: 34,612,471 I349T probably benign Het
Inpp5a A T 7: 139,400,673 D9V probably benign Het
Irs1 T C 1: 82,287,684 N937S possibly damaging Het
Kcna4 T C 2: 107,294,972 M17T probably benign Het
Lipa T A 19: 34,524,746 M33L probably benign Het
March6 G T 15: 31,467,692 Q790K probably benign Het
Mccc1 G A 3: 35,976,727 P397S probably benign Het
Mrgprb2 T C 7: 48,552,390 I196V probably benign Het
Myh15 T A 16: 49,101,481 S463R probably damaging Het
Nab2 T C 10: 127,664,351 K291E probably damaging Het
Neto2 T C 8: 85,642,509 T294A probably damaging Het
Nkx1-1 T C 5: 33,433,976 M1V probably null Het
Olfr90 C T 17: 37,086,085 V27I probably benign Het
Pla2g4c C T 7: 13,344,008 T357I probably benign Het
Psmd2 A G 16: 20,655,273 E242G probably benign Het
Rnase12 A C 14: 51,057,094 Y43D probably damaging Het
Rpl18 T A 7: 45,719,592 F58I probably damaging Het
Ryr1 T G 7: 29,075,257 M2313L possibly damaging Het
Scn4a G T 11: 106,320,311 Q1627K probably damaging Het
Scnn1g A G 7: 121,767,499 S640G probably benign Het
Sdccag3 A G 2: 26,385,081 probably null Het
Soat1 A T 1: 156,435,803 M392K probably damaging Het
Spata18 G T 5: 73,675,216 K337N probably damaging Het
Supt16 A G 14: 52,179,546 V325A probably benign Het
Syt2 A G 1: 134,746,850 E342G probably damaging Het
Tars2 A T 3: 95,754,487 L37* probably null Het
Tep1 T C 14: 50,845,431 D1040G probably damaging Het
Tmc8 A T 11: 117,791,600 S613C probably null Het
Top3a C T 11: 60,744,023 C660Y probably damaging Het
Tpsg1 C T 17: 25,372,569 R48C probably damaging Het
Vmn2r57 T C 7: 41,428,818 N72S probably benign Het
Whrn G A 4: 63,472,684 T269I probably benign Het
Zfp759 T A 13: 67,138,905 Y173* probably null Het
Other mutations in Sdr9c7
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00778:Sdr9c7 APN 10 127909828 missense probably damaging 1.00
IGL00857:Sdr9c7 APN 10 127898859 missense probably benign
IGL02280:Sdr9c7 APN 10 127902418 splice site probably benign
IGL02668:Sdr9c7 APN 10 127902398 missense probably damaging 0.99
R0047:Sdr9c7 UTSW 10 127903672 missense probably benign
R0047:Sdr9c7 UTSW 10 127903672 missense probably benign
R0325:Sdr9c7 UTSW 10 127898719 missense probably benign 0.00
R0440:Sdr9c7 UTSW 10 127898953 splice site probably benign
R1720:Sdr9c7 UTSW 10 127902258 missense probably damaging 1.00
R1936:Sdr9c7 UTSW 10 127903634 missense probably benign
R4790:Sdr9c7 UTSW 10 127903579 missense possibly damaging 0.77
R5145:Sdr9c7 UTSW 10 127902390 missense probably damaging 1.00
R5241:Sdr9c7 UTSW 10 127909790 missense probably benign 0.43
R8024:Sdr9c7 UTSW 10 127898882 missense probably benign 0.01
R8228:Sdr9c7 UTSW 10 127898675 missense possibly damaging 0.94
R8939:Sdr9c7 UTSW 10 127898907 missense probably benign
R9020:Sdr9c7 UTSW 10 127909790 missense possibly damaging 0.94
Z1176:Sdr9c7 UTSW 10 127902381 missense probably damaging 1.00
Predicted Primers PCR Primer
(F):5'- TTCCCAGAAAGATAGGTCCTTCC -3'
(R):5'- TACACTGTGGCTCTGCAAC -3'

Sequencing Primer
(F):5'- GATAGGTCCTTCCAAAAGTGTCTCTG -3'
(R):5'- TGCAACGTGGGCTCTAATC -3'
Posted On 2018-05-04