Incidental Mutation 'R6386:Cyp4a29'
ID |
515596 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Cyp4a29
|
Ensembl Gene |
ENSMUSG00000083138 |
Gene Name |
cytochrome P450, family 4, subfamily a, polypeptide 29 |
Synonyms |
Cyp4a29-ps |
MMRRC Submission |
044535-MU
|
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.067)
|
Stock # |
R6386 (G1)
|
Quality Score |
225.009 |
Status
|
Not validated
|
Chromosome |
4 |
Chromosomal Location |
115099281-115111754 bp(+) (GRCm39) |
Type of Mutation |
critical splice donor site (2 bp from exon) |
DNA Base Change (assembly) |
T to G
at 115104272 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
|
Ref Sequence |
ENSEMBL: ENSMUSP00000139717
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000118278]
[ENSMUST00000118278]
|
AlphaFold |
A0A087WPC3 |
Predicted Effect |
probably null
Transcript: ENSMUST00000118278
|
SMART Domains |
Protein: ENSMUSP00000139717 Gene: ENSMUSG00000083138
Domain | Start | End | E-Value | Type |
transmembrane domain
|
9 |
31 |
N/A |
INTRINSIC |
Pfam:p450
|
51 |
504 |
1.1e-127 |
PFAM |
|
Predicted Effect |
probably null
Transcript: ENSMUST00000118278
|
SMART Domains |
Protein: ENSMUSP00000139717 Gene: ENSMUSG00000083138
Domain | Start | End | E-Value | Type |
transmembrane domain
|
9 |
31 |
N/A |
INTRINSIC |
Pfam:p450
|
51 |
504 |
1.1e-127 |
PFAM |
|
Coding Region Coverage |
- 1x: 100.0%
- 3x: 99.9%
- 10x: 99.1%
- 20x: 96.6%
|
Validation Efficiency |
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 36 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Ak6 |
TGACGA |
TGA |
13: 100,792,311 (GRCm39) |
|
probably benign |
Het |
Arap2 |
A |
T |
5: 62,761,865 (GRCm39) |
N1620K |
possibly damaging |
Het |
Atf6b |
T |
C |
17: 34,870,825 (GRCm39) |
S396P |
probably damaging |
Het |
Cc2d1a |
A |
G |
8: 84,865,166 (GRCm39) |
M469T |
probably damaging |
Het |
Ceacam3 |
A |
G |
7: 16,892,144 (GRCm39) |
N296D |
probably benign |
Het |
Cep57l1 |
A |
T |
10: 41,619,128 (GRCm39) |
S80T |
probably damaging |
Het |
Clip4 |
C |
A |
17: 72,141,189 (GRCm39) |
Y514* |
probably null |
Het |
Cop1 |
T |
C |
1: 159,116,601 (GRCm39) |
I125T |
probably damaging |
Het |
Cstf1 |
T |
C |
2: 172,219,816 (GRCm39) |
V309A |
probably damaging |
Het |
F830045P16Rik |
G |
A |
2: 129,314,738 (GRCm39) |
H180Y |
probably damaging |
Het |
Foxp4 |
T |
C |
17: 48,189,387 (GRCm39) |
K237E |
unknown |
Het |
Fstl5 |
A |
T |
3: 76,229,373 (GRCm39) |
H58L |
probably benign |
Het |
Gje1 |
A |
G |
10: 14,592,365 (GRCm39) |
F139S |
probably damaging |
Het |
Gpatch1 |
T |
C |
7: 34,991,265 (GRCm39) |
D593G |
probably damaging |
Het |
Inpp5d |
T |
A |
1: 87,627,397 (GRCm39) |
L566Q |
probably damaging |
Het |
Mtch2 |
A |
G |
2: 90,679,739 (GRCm39) |
T38A |
probably benign |
Het |
Mvb12b |
A |
T |
2: 33,717,754 (GRCm39) |
I129N |
probably damaging |
Het |
Npffr2 |
T |
C |
5: 89,730,556 (GRCm39) |
V162A |
probably benign |
Het |
Or4d10b |
A |
T |
19: 12,036,920 (GRCm39) |
N65K |
probably damaging |
Het |
Or5p61 |
A |
T |
7: 107,758,409 (GRCm39) |
Y224N |
probably damaging |
Het |
Pkhd1 |
G |
A |
1: 20,621,244 (GRCm39) |
R805C |
probably damaging |
Het |
Ppp4r4 |
T |
C |
12: 103,559,364 (GRCm39) |
L406P |
probably damaging |
Het |
Prl3d2 |
A |
G |
13: 27,311,286 (GRCm39) |
D186G |
probably damaging |
Het |
Rfc5 |
T |
C |
5: 117,523,463 (GRCm39) |
T112A |
probably benign |
Het |
Rnf148 |
A |
G |
6: 23,654,483 (GRCm39) |
L171P |
probably damaging |
Het |
Rps24 |
G |
A |
14: 24,542,116 (GRCm39) |
G71S |
possibly damaging |
Het |
Slco2a1 |
G |
A |
9: 102,954,187 (GRCm39) |
V453I |
probably benign |
Het |
Spidr |
T |
C |
16: 15,786,424 (GRCm39) |
K440E |
probably benign |
Het |
Syndig1 |
C |
A |
2: 149,741,496 (GRCm39) |
N27K |
probably damaging |
Het |
Tmem62 |
C |
T |
2: 120,829,595 (GRCm39) |
T316I |
probably benign |
Het |
Tpgs2 |
A |
T |
18: 25,272,081 (GRCm39) |
I258N |
possibly damaging |
Het |
Vmn2r78 |
A |
T |
7: 86,571,545 (GRCm39) |
R452* |
probably null |
Het |
Wasf3 |
A |
T |
5: 146,390,227 (GRCm39) |
I124F |
possibly damaging |
Het |
Wbp11 |
T |
C |
6: 136,797,523 (GRCm39) |
T299A |
probably benign |
Het |
Wdr25 |
T |
C |
12: 108,990,991 (GRCm39) |
S41P |
probably damaging |
Het |
Zfp874b |
T |
C |
13: 67,622,962 (GRCm39) |
D116G |
possibly damaging |
Het |
|
Other mutations in Cyp4a29 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL02687:Cyp4a29
|
APN |
4 |
115,108,397 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL03224:Cyp4a29
|
APN |
4 |
115,104,247 (GRCm39) |
missense |
probably damaging |
0.97 |
IGL03271:Cyp4a29
|
APN |
4 |
115,111,705 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL03387:Cyp4a29
|
APN |
4 |
115,108,368 (GRCm39) |
missense |
possibly damaging |
0.70 |
R0304:Cyp4a29
|
UTSW |
4 |
115,110,129 (GRCm39) |
splice site |
probably benign |
|
R2656:Cyp4a29
|
UTSW |
4 |
115,106,921 (GRCm39) |
missense |
possibly damaging |
0.95 |
R4012:Cyp4a29
|
UTSW |
4 |
115,105,707 (GRCm39) |
missense |
probably benign |
|
R4834:Cyp4a29
|
UTSW |
4 |
115,106,867 (GRCm39) |
missense |
probably benign |
0.00 |
R4856:Cyp4a29
|
UTSW |
4 |
115,110,078 (GRCm39) |
missense |
probably benign |
|
R4886:Cyp4a29
|
UTSW |
4 |
115,110,078 (GRCm39) |
missense |
probably benign |
|
R4939:Cyp4a29
|
UTSW |
4 |
115,104,873 (GRCm39) |
critical splice donor site |
probably null |
|
R4967:Cyp4a29
|
UTSW |
4 |
115,104,196 (GRCm39) |
missense |
probably benign |
0.00 |
R5071:Cyp4a29
|
UTSW |
4 |
115,104,860 (GRCm39) |
missense |
probably benign |
0.00 |
R5072:Cyp4a29
|
UTSW |
4 |
115,104,860 (GRCm39) |
missense |
probably benign |
0.00 |
R5073:Cyp4a29
|
UTSW |
4 |
115,104,860 (GRCm39) |
missense |
probably benign |
0.00 |
R5620:Cyp4a29
|
UTSW |
4 |
115,108,088 (GRCm39) |
missense |
probably benign |
0.12 |
R5818:Cyp4a29
|
UTSW |
4 |
115,104,229 (GRCm39) |
missense |
possibly damaging |
0.89 |
R6219:Cyp4a29
|
UTSW |
4 |
115,106,927 (GRCm39) |
missense |
probably damaging |
0.99 |
R6318:Cyp4a29
|
UTSW |
4 |
115,107,396 (GRCm39) |
missense |
probably benign |
0.00 |
R6456:Cyp4a29
|
UTSW |
4 |
115,108,381 (GRCm39) |
missense |
probably benign |
0.30 |
R7393:Cyp4a29
|
UTSW |
4 |
115,099,393 (GRCm39) |
missense |
probably damaging |
1.00 |
R7443:Cyp4a29
|
UTSW |
4 |
115,105,756 (GRCm39) |
missense |
probably damaging |
1.00 |
R7719:Cyp4a29
|
UTSW |
4 |
115,108,137 (GRCm39) |
missense |
possibly damaging |
0.65 |
R7831:Cyp4a29
|
UTSW |
4 |
115,107,367 (GRCm39) |
missense |
probably benign |
0.00 |
R7983:Cyp4a29
|
UTSW |
4 |
115,108,099 (GRCm39) |
missense |
probably damaging |
1.00 |
R8304:Cyp4a29
|
UTSW |
4 |
115,111,653 (GRCm39) |
missense |
probably damaging |
1.00 |
R8674:Cyp4a29
|
UTSW |
4 |
115,106,882 (GRCm39) |
missense |
probably benign |
0.08 |
R9109:Cyp4a29
|
UTSW |
4 |
115,108,395 (GRCm39) |
missense |
probably damaging |
1.00 |
R9298:Cyp4a29
|
UTSW |
4 |
115,108,395 (GRCm39) |
missense |
probably damaging |
1.00 |
R9486:Cyp4a29
|
UTSW |
4 |
115,106,916 (GRCm39) |
missense |
probably damaging |
1.00 |
R9601:Cyp4a29
|
UTSW |
4 |
115,105,772 (GRCm39) |
missense |
probably damaging |
0.98 |
R9667:Cyp4a29
|
UTSW |
4 |
115,111,630 (GRCm39) |
missense |
probably damaging |
1.00 |
R9790:Cyp4a29
|
UTSW |
4 |
115,108,380 (GRCm39) |
missense |
probably damaging |
1.00 |
R9791:Cyp4a29
|
UTSW |
4 |
115,108,380 (GRCm39) |
missense |
probably damaging |
1.00 |
U24488:Cyp4a29
|
UTSW |
4 |
115,108,204 (GRCm39) |
missense |
possibly damaging |
0.95 |
Z1088:Cyp4a29
|
UTSW |
4 |
115,105,693 (GRCm39) |
missense |
probably benign |
0.00 |
|
Predicted Primers |
PCR Primer
(F):5'- TACTTCCAGCCTGTTCAAGATG -3'
(R):5'- CTGTTAAAGGGATGTCTCAAACCC -3'
Sequencing Primer
(F):5'- TCCAGCCTGTTCAAGATGATATC -3'
(R):5'- CGACAAATTTTCTAGCTAGTCAACTG -3'
|
Posted On |
2018-05-04 |