Mutagenetix > Incidental Mutations

Incidental Mutation 'R6450:Acaca'

519366

Institutional Source

Beutler Lab

Gene Symbol

Acaca

Ensembl Gene

ENSMUSG00000020532

Gene Name

acetyl-Coenzyme A carboxylase alpha

Synonyms

LOC327983, Acac, A530025K05Rik, acetyl-CoA carboxylase, Acc1

MMRRC Submission

Accession Numbers

Is this an essential gene?

Essential (E-score: 1.000) question?

Stock #

R6450 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

84129672-84401651 bp(+) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

T to A at 84280468 bp

Zygosity

Heterozygous

Amino Acid Change

Valine to Glutamic Acid at position 5 (V5E)

Ref Sequence

ENSEMBL: ENSMUSP00000139378 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000020843] [ENSMUST00000103201] [ENSMUST00000183887]

Predicted Effect

possibly damaging
Transcript: ENSMUST00000020843
AA Change: V1176E

PolyPhen 2 Score 0.951 (Sensitivity: 0.79; Specificity: 0.95)

SMART Domains

Protein: ENSMUSP00000020843
Gene: ENSMUSG00000020532
AA Change: V1176E

Domain	Start	End	E-Value	Type
Pfam:CPSase_L_chain	116	236	4.7e-33	PFAM
Pfam:CPSase_L_D2	272	472	2.5e-55	PFAM
Pfam:ATP-grasp	280	443	4.3e-7	PFAM
Pfam:ATP-grasp_4	282	442	1.9e-11	PFAM
Pfam:Dala_Dala_lig_C	284	440	5.4e-7	PFAM
Biotin_carb_C	506	613	3.76e-24	SMART
low complexity region	708	725	N/A	INTRINSIC
Pfam:Biotin_lipoyl	751	817	9.8e-19	PFAM
Pfam:ACC_central	818	1568	2.1e-288	PFAM
Pfam:Carboxyl_trans	1668	2222	1.6e-185	PFAM

Predicted Effect

possibly damaging
Transcript: ENSMUST00000103201
AA Change: V1176E

PolyPhen 2 Score 0.951 (Sensitivity: 0.79; Specificity: 0.95)

SMART Domains

Protein: ENSMUSP00000099490
Gene: ENSMUSG00000020532
AA Change: V1176E

Domain	Start	End	E-Value	Type
Pfam:CPSase_L_chain	116	236	6.7e-29	PFAM
Pfam:ATP-grasp_4	239	442	2e-15	PFAM
Pfam:CPSase_L_D2	272	472	3.3e-55	PFAM
Pfam:Dala_Dala_lig_C	279	440	3e-7	PFAM
Pfam:ATP-grasp	281	442	1.1e-6	PFAM
Biotin_carb_C	506	613	3.76e-24	SMART
low complexity region	708	725	N/A	INTRINSIC
Pfam:Biotin_lipoyl	751	817	3.7e-18	PFAM
Pfam:ACC_central	818	1568	3.5e-253	PFAM
Pfam:Carboxyl_trans	1668	2222	2.7e-175	PFAM

Predicted Effect

probably damaging
Transcript: ENSMUST00000183887
AA Change: V5E

PolyPhen 2 Score 0.975 (Sensitivity: 0.76; Specificity: 0.96)

SMART Domains

Protein: ENSMUSP00000139378
Gene: ENSMUSG00000020532
AA Change: V5E

Domain	Start	End	E-Value	Type
Pfam:ACC_central	1	228	8.6e-57	PFAM

Meta Mutation Damage Score

0.6710

Coding Region Coverage

1x: 100.0%
3x: 99.8%
10x: 98.5%
20x: 95.1%

Validation Efficiency

97% (68/70)

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] Acetyl-CoA carboxylase (ACC) is a complex multifunctional enzyme system. ACC is a biotin-containing enzyme which catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, the rate-limiting step in fatty acid synthesis. There are two ACC forms, alpha and beta, encoded by two different genes. ACC-alpha is highly enriched in lipogenic tissues. The enzyme is under long term control at the transcriptional and translational levels and under short term regulation by the phosphorylation/dephosphorylation of targeted serine residues and by allosteric transformation by citrate or palmitoyl-CoA. Multiple alternatively spliced transcript variants divergent in the 5' sequence and encoding distinct isoforms have been found for this gene. [provided by RefSeq, Jul 2008]
PHENOTYPE: Homozygous null mice display embryonic lethality before embryo turning with growth arrest at the egg cylinder stage. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 71 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abca14	C	G	7: 120,216,226	N232K	probably benign	Het
Adam18	A	T	8: 24,629,675	D529E	probably benign	Het
Adgrb3	T	C	1: 25,420,602	T798A	probably benign	Het
Alyref	T	C	11: 120,596,046	T130A	probably benign	Het
Arhgap24	A	G	5: 102,897,124	S591G	probably benign	Het
Carmil1	C	T	13: 24,036,564	G655E	probably damaging	Het
Cdc42bpg	T	A	19: 6,314,488		probably null	Het
Clec12a	T	A	6: 129,353,403	L48H	probably damaging	Het
Coq2	C	A	5: 100,661,904		probably benign	Het
Crb2	C	A	2: 37,793,826	F1113L	possibly damaging	Het
Ctla4	A	T	1: 60,912,713	M134L	probably benign	Het
Dnase1l1	C	T	X: 74,277,038		probably null	Homo
Efhb	A	G	17: 53,452,604	V290A	possibly damaging	Het
Epha8	T	C	4: 136,931,899	N843S	probably damaging	Het
Eva1a	A	T	6: 82,092,105	I138F	probably damaging	Het
Fat2	T	A	11: 55,289,310	I1402F	probably damaging	Het
Fat3	A	T	9: 15,999,170	H1845Q	possibly damaging	Het
Gimap8	T	A	6: 48,656,451	F401L	probably benign	Het
Gm12394	C	A	4: 42,792,489	G548W	probably damaging	Het
Gpr162	C	T	6: 124,861,189	R166Q	possibly damaging	Het
Hdac4	G	A	1: 91,984,711	P348S	possibly damaging	Het
Hist1h2ae	A	G	13: 23,570,945	V55A	probably damaging	Het
Hmcn2	T	C	2: 31,361,800	V849A	probably benign	Het
Inpp5b	T	A	4: 124,792,252	N696K	probably damaging	Het
Kdm5d	G	T	Y: 927,056	R598L	probably damaging	Homo
Kidins220	T	C	12: 25,057,191	S1548P	probably benign	Het
Kif2b	C	A	11: 91,576,366	V364L	probably damaging	Het
Kitl	A	G	10: 100,087,394	M1V	probably null	Het
Klra9	G	T	6: 130,179,032	Y253*	probably null	Het
Map6	T	C	7: 99,268,038	I6T	probably damaging	Het
Mastl	T	C	2: 23,120,929	T768A	probably damaging	Het
Mettl16	T	C	11: 74,805,338	V335A	probably benign	Het
Mpl	T	C	4: 118,448,700		probably null	Het
Myo5c	C	T	9: 75,286,578	T1205I	probably benign	Het
Nav2	C	A	7: 49,594,366	L2114I	probably damaging	Het
Neb	T	A	2: 52,194,469	K5330*	probably null	Het
Nfe2l1	C	T	11: 96,827,335	E125K	possibly damaging	Het
Olfr1317	T	A	2: 112,142,380	L145*	probably null	Het
Onecut3	A	G	10: 80,496,088	K361E	probably damaging	Het
Osbpl6	A	G	2: 76,564,830	N370S	possibly damaging	Het
Otud4	T	A	8: 79,672,997	M780K	probably benign	Het
P2rx4	A	G	5: 122,727,241	T310A	possibly damaging	Het
Pcdha11	G	T	18: 37,013,162	D769Y	probably damaging	Het
Pcgf6	C	T	19: 47,049,088	R124H	probably benign	Het
Pibf1	T	A	14: 99,137,210	Y362N	probably damaging	Het
Ppm1g	T	C	5: 31,203,124	E422G	probably benign	Het
Prmt8	T	C	6: 127,732,643	I85V	possibly damaging	Het
Prss27	A	T	17: 24,045,014	K225*	probably null	Het
Rai1	A	T	11: 60,186,603	T498S	probably benign	Het
Sbf2	C	A	7: 110,462,863	G23V	probably damaging	Het
Sdha	C	T	13: 74,334,293		probably null	Het
Sgo2a	C	T	1: 58,002,933	Q140*	probably null	Het
Sh3rf3	A	G	10: 58,984,144	D259G	probably damaging	Het
Slc27a3	C	A	3: 90,385,470	D631Y	probably damaging	Het
Slc7a10	T	C	7: 35,186,590	S37P	possibly damaging	Het
Slco6d1	A	G	1: 98,421,467	T88A	probably benign	Het
Smad4	A	T	18: 73,677,746	S56T	possibly damaging	Het
Smarcd1	A	G	15: 99,707,885	I346V	possibly damaging	Het
Spast	C	T	17: 74,368,840	P260S	probably benign	Het
Sprr2i	A	T	3: 92,408,710		probably benign	Het
Sptbn5	A	G	2: 120,047,135		probably benign	Het
Taar9	A	T	10: 24,109,240	Y99N	probably damaging	Het
Trappc10	A	T	10: 78,209,450	M468K	possibly damaging	Het
Trim66	T	C	7: 109,460,738	R814G	probably benign	Het
Tspan31	A	G	10: 127,068,358	C157R	probably damaging	Het
Vmn2r90	A	G	17: 17,733,236	D554G	possibly damaging	Het
Vmn2r91	A	T	17: 18,085,265	D70V	probably damaging	Het
Wdfy4	C	T	14: 33,108,692	G928R	probably damaging	Het
Wdr60	A	T	12: 116,246,727	Y314*	probably null	Het
Zfp346	G	T	13: 55,113,704	K102N	probably damaging	Het
Zmym4	G	A	4: 126,895,306	P1002S	probably damaging	Het

Other mutations in Acaca

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00544:Acaca	APN	11	84278917	missense	probably damaging	1.00
IGL01134:Acaca	APN	11	84251279	missense	probably benign	0.22
IGL01446:Acaca	APN	11	84260631	missense	probably damaging	1.00
IGL01591:Acaca	APN	11	84243320	missense	probably damaging	1.00
IGL01663:Acaca	APN	11	84277802	missense	possibly damaging	0.85
IGL01767:Acaca	APN	11	84320542	missense	probably benign	0.01
IGL02206:Acaca	APN	11	84260747	nonsense	probably null
IGL02335:Acaca	APN	11	84214258	missense	possibly damaging	0.84
IGL02477:Acaca	APN	11	84307168	splice site	probably benign
IGL02515:Acaca	APN	11	84262403	missense	probably benign
IGL02651:Acaca	APN	11	84245204	splice site	probably benign
IGL02805:Acaca	APN	11	84223133	splice site	probably benign
IGL03328:Acaca	APN	11	84320529	missense	probably benign	0.00
ANU05:Acaca	UTSW	11	84315852	missense	probably damaging	1.00
R0385:Acaca	UTSW	11	84231748	missense	probably benign	0.01
R0518:Acaca	UTSW	11	84290286	critical splice acceptor site	probably null
R0536:Acaca	UTSW	11	84280516	splice site	probably benign
R0962:Acaca	UTSW	11	84311303	missense	probably damaging	1.00
R0968:Acaca	UTSW	11	84239033	nonsense	probably null
R1123:Acaca	UTSW	11	84264080	missense	probably benign	0.09
R1452:Acaca	UTSW	11	84295059	splice site	probably benign
R1478:Acaca	UTSW	11	84372627	missense	probably damaging	1.00
R1500:Acaca	UTSW	11	84293984	missense	probably benign	0.00
R1512:Acaca	UTSW	11	84195469	missense	probably benign	0.00
R1657:Acaca	UTSW	11	84264084	missense	probably benign	0.09
R1681:Acaca	UTSW	11	84226185	missense	probably damaging	1.00
R1682:Acaca	UTSW	11	84392217	missense	probably benign	0.23
R1688:Acaca	UTSW	11	84238896	missense	probably damaging	1.00
R1755:Acaca	UTSW	11	84276564	frame shift	probably null
R1775:Acaca	UTSW	11	84300422	missense	possibly damaging	0.56
R1793:Acaca	UTSW	11	84315969	missense	probably damaging	0.98
R1793:Acaca	UTSW	11	84338393	missense	probably damaging	1.00
R1855:Acaca	UTSW	11	84371554	missense	probably damaging	0.96
R1881:Acaca	UTSW	11	84270387	nonsense	probably null
R1881:Acaca	UTSW	11	84300471	splice site	probably benign
R1989:Acaca	UTSW	11	84262529	missense	probably damaging	0.98
R2147:Acaca	UTSW	11	84276536	missense	probably benign	0.03
R2215:Acaca	UTSW	11	84363793	missense	probably damaging	1.00
R2238:Acaca	UTSW	11	84391505	splice site	probably benign
R2252:Acaca	UTSW	11	84371532	missense	probably damaging	0.99
R2316:Acaca	UTSW	11	84264080	missense	probably benign	0.16
R2316:Acaca	UTSW	11	84294983	missense	possibly damaging	0.69
R2337:Acaca	UTSW	11	84257197	missense	possibly damaging	0.93
R2697:Acaca	UTSW	11	84364413	missense	probably damaging	1.00
R3551:Acaca	UTSW	11	84261624	missense	probably damaging	1.00
R3552:Acaca	UTSW	11	84261624	missense	probably damaging	1.00
R3748:Acaca	UTSW	11	84311409	unclassified	probably null
R3844:Acaca	UTSW	11	84364413	missense	probably damaging	1.00
R3873:Acaca	UTSW	11	84312721	unclassified	probably benign
R4152:Acaca	UTSW	11	84292926	missense	possibly damaging	0.88
R4406:Acaca	UTSW	11	84280449	missense	probably benign	0.35
R4448:Acaca	UTSW	11	84262492	missense	probably damaging	1.00
R4642:Acaca	UTSW	11	84280461	missense	probably damaging	1.00
R4696:Acaca	UTSW	11	84280435	missense	possibly damaging	0.78
R4707:Acaca	UTSW	11	84312854	missense	probably damaging	0.96
R4710:Acaca	UTSW	11	84392337	missense	possibly damaging	0.84
R4775:Acaca	UTSW	11	84243339	missense	probably damaging	1.00
R4821:Acaca	UTSW	11	84294987	missense	possibly damaging	0.69
R4883:Acaca	UTSW	11	84251290	missense	probably benign	0.01
R4988:Acaca	UTSW	11	84263295	missense	probably damaging	1.00
R5034:Acaca	UTSW	11	84245264	missense	probably benign	0.00
R5255:Acaca	UTSW	11	84311307	missense	probably damaging	1.00
R5294:Acaca	UTSW	11	84391519	missense	probably benign	0.01
R5350:Acaca	UTSW	11	84215873	missense	probably damaging	0.99
R5437:Acaca	UTSW	11	84346820	splice site	probably null
R5664:Acaca	UTSW	11	84243384	missense	probably damaging	1.00
R5665:Acaca	UTSW	11	84245294	nonsense	probably null
R5959:Acaca	UTSW	11	84215966	missense	probably damaging	1.00
R6011:Acaca	UTSW	11	84245744	missense	probably benign	0.44
R6027:Acaca	UTSW	11	84398177	missense	probably benign
R6246:Acaca	UTSW	11	84315970	missense	probably benign	0.08
R6313:Acaca	UTSW	11	84292929	missense	probably benign	0.00
R6623:Acaca	UTSW	11	84371499	critical splice acceptor site	probably null
R6736:Acaca	UTSW	11	84238838	missense	probably benign	0.05
R6752:Acaca	UTSW	11	84195483	missense	probably benign	0.44
R6807:Acaca	UTSW	11	84391530	missense	probably benign
R6826:Acaca	UTSW	11	84195536	missense	probably damaging	1.00
R7035:Acaca	UTSW	11	84238943	missense	probably damaging	1.00
R7078:Acaca	UTSW	11	84263312	missense	possibly damaging	0.91
R7088:Acaca	UTSW	11	84278957	critical splice donor site	probably null
R7201:Acaca	UTSW	11	84262474	missense	probably benign	0.41
R7261:Acaca	UTSW	11	84368700	missense	probably damaging	1.00
R7399:Acaca	UTSW	11	84260679	missense	possibly damaging	0.89
R7421:Acaca	UTSW	11	84363736	missense	possibly damaging	0.64
R7443:Acaca	UTSW	11	84315793	missense	probably benign	0.02
R7453:Acaca	UTSW	11	84245310	missense	probably benign
R7519:Acaca	UTSW	11	84245856	missense	probably damaging	0.98
R7537:Acaca	UTSW	11	84260634	missense	probably damaging	1.00
R7574:Acaca	UTSW	11	84261588	missense	probably benign
R7633:Acaca	UTSW	11	84372639	missense	probably benign	0.26
R7643:Acaca	UTSW	11	84338356	missense	probably damaging	1.00
R7664:Acaca	UTSW	11	84245349	missense	probably damaging	1.00
R7675:Acaca	UTSW	11	84315916	missense	probably benign	0.04
R7676:Acaca	UTSW	11	84294987	missense	possibly damaging	0.69
R7729:Acaca	UTSW	11	84371513	missense	probably damaging	0.98
X0027:Acaca	UTSW	11	84292895	missense	probably benign	0.01
X0060:Acaca	UTSW	11	84264104	missense	probably benign
X0067:Acaca	UTSW	11	84368737	nonsense	probably null

Predicted Primers

PCR Primer
(F):5'- CCAGCTTTAAGGGTCTTGCACC -3'
(R):5'- GGGTTCATTCAAGTCTGCCC -3'

Sequencing Primer
(F):5'- ACTGCCATCTCGGTAACAGATGTG -3'
(R):5'- GGGTTCATTCAAGTCTGCCCATTTG -3'

Posted On

2018-05-24