Incidental Mutation 'IGL01079:Gm5424'
| ID |
52064 |
| Institutional Source |
Australian Phenomics Network
(link to record)
|
| Gene Symbol |
Gm5424
|
| Ensembl Gene |
ENSMUSG00000046687 |
| Gene Name |
predicted gene 5424 |
| Synonyms |
|
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.204)
|
| Stock # |
IGL01079
|
| Quality Score |
|
|
Status
|
|
| Chromosome |
10 |
| Chromosomal Location |
61906902-61908141 bp(+) (GRCm39) |
| Type of Mutation |
exon |
| DNA Base Change (assembly) |
T to C
at 61907863 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
|
| Gene Model |
predicted gene model for transcript(s):
|
| AlphaFold |
no structure available at present |
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000053865
|
| SMART Domains |
Protein: ENSMUSP00000136734
Gene: ENSMUSG00000046687
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:QueC
|
6 |
93 |
1.2e-7 |
PFAM |
|
Pfam:Arginosuc_synth
|
8 |
403 |
1.1e-178 |
PFAM |
|
| Coding Region Coverage |
|
| Validation Efficiency |
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 14 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Cacna2d1 |
T |
A |
5: 16,575,646 (GRCm39) |
S1079T |
probably benign |
Het |
| Cstb |
T |
C |
10: 78,262,779 (GRCm39) |
S29P |
probably benign |
Het |
| Eif1ad13 |
A |
T |
12: 87,762,578 (GRCm39) |
E99D |
possibly damaging |
Het |
| F8 |
T |
A |
X: 74,330,224 (GRCm39) |
D1222V |
probably damaging |
Het |
| Fcgbpl1 |
A |
T |
7: 27,839,203 (GRCm39) |
S339C |
probably damaging |
Het |
| Gal3st1 |
A |
G |
11: 3,948,564 (GRCm39) |
E257G |
probably damaging |
Het |
| Ikbke |
A |
T |
1: 131,193,384 (GRCm39) |
D515E |
possibly damaging |
Het |
| Irag1 |
C |
T |
7: 110,545,174 (GRCm39) |
A41T |
possibly damaging |
Het |
| Or51b6 |
A |
G |
7: 103,555,669 (GRCm39) |
I5V |
probably benign |
Het |
| Or5d43 |
A |
C |
2: 88,105,060 (GRCm39) |
F111C |
probably damaging |
Het |
| Or6c209 |
T |
G |
10: 129,483,243 (GRCm39) |
L82R |
possibly damaging |
Het |
| Plekhg3 |
A |
T |
12: 76,609,052 (GRCm39) |
I142L |
possibly damaging |
Het |
| Tet1 |
G |
A |
10: 62,715,252 (GRCm39) |
T181I |
probably damaging |
Het |
| Tfcp2l1 |
T |
C |
1: 118,580,612 (GRCm39) |
V102A |
possibly damaging |
Het |
|
| Other mutations in Gm5424 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL01399:Gm5424
|
APN |
10 |
61,907,272 (GRCm39) |
exon |
noncoding transcript |
|
|
IGL02126:Gm5424
|
APN |
10 |
61,907,377 (GRCm39) |
exon |
noncoding transcript |
|
|
IGL02708:Gm5424
|
APN |
10 |
61,907,390 (GRCm39) |
exon |
noncoding transcript |
|
|
IGL03342:Gm5424
|
APN |
10 |
61,907,971 (GRCm39) |
exon |
noncoding transcript |
|
|
R0631:Gm5424
|
UTSW |
10 |
61,907,313 (GRCm39) |
exon |
noncoding transcript |
|
|
R1791:Gm5424
|
UTSW |
10 |
61,908,086 (GRCm39) |
exon |
noncoding transcript |
|
|
R2043:Gm5424
|
UTSW |
10 |
61,906,990 (GRCm39) |
exon |
noncoding transcript |
|
|
R5260:Gm5424
|
UTSW |
10 |
61,907,374 (GRCm39) |
exon |
noncoding transcript |
|
|
| Posted On |
2013-06-21 |
Incidental Mutation