Incidental Mutation 'R6548:Vmn1r62'
ID 521361
Institutional Source Beutler Lab
Gene Symbol Vmn1r62
Ensembl Gene ENSMUSG00000092579
Gene Name vomeronasal 1 receptor 62
Synonyms V3R2, V1rd8, V1rd2
MMRRC Submission 044673-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.043) question?
Stock # R6548 (G1)
Quality Score 225.009
Status Not validated
Chromosome 7
Chromosomal Location 5677603-5679598 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) G to A at 5678769 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Glycine to Aspartic acid at position 150 (G150D)
Ref Sequence ENSEMBL: ENSMUSP00000134168 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000173956]
AlphaFold Q8R2C0
Predicted Effect probably damaging
Transcript: ENSMUST00000173956
AA Change: G150D

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
SMART Domains Protein: ENSMUSP00000134168
Gene: ENSMUSG00000092579
AA Change: G150D

DomainStartEndE-ValueType
Pfam:TAS2R 1 296 2.8e-11 PFAM
Pfam:7tm_1 20 279 3.1e-6 PFAM
Pfam:V1R 31 299 4.2e-18 PFAM
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 99.9%
  • 10x: 99.3%
  • 20x: 97.7%
Validation Efficiency 93% (38/41)
Allele List at MGI
Other mutations in this stock
Total: 40 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
9030612E09Rik T C 10: 43,050,769 (GRCm39) L21P probably damaging Het
Ank3 C T 10: 69,728,240 (GRCm39) A642V probably damaging Het
Bap1 A G 14: 30,978,182 (GRCm39) N349S probably benign Het
Brca1 G T 11: 101,415,591 (GRCm39) Q32K probably damaging Het
Ccdc39 A T 3: 33,892,108 (GRCm39) N121K probably benign Het
Champ1 A T 8: 13,930,002 (GRCm39) N720I probably damaging Het
Chd3 T A 11: 69,252,886 (GRCm39) R216* probably null Het
D630003M21Rik A G 2: 158,047,619 (GRCm39) probably null Het
Exoc2 A T 13: 31,010,047 (GRCm39) V804E possibly damaging Het
Fcgbp A G 7: 27,791,343 (GRCm39) N868S probably benign Het
Gm10376 T C 14: 42,873,025 (GRCm39) M1V probably null Het
Gpc2 G A 5: 138,275,533 (GRCm39) probably null Het
Gpr37 G A 6: 25,688,812 (GRCm39) T95I probably benign Het
Ints3 G A 3: 90,299,431 (GRCm39) probably benign Het
Krt28 T C 11: 99,257,839 (GRCm39) E334G probably damaging Het
Lrrc75a T A 11: 62,496,921 (GRCm39) T214S probably damaging Het
Lyar A G 5: 38,385,202 (GRCm39) I81V probably benign Het
Mon2 A T 10: 122,871,998 (GRCm39) L342Q probably damaging Het
Mug2 C T 6: 122,024,401 (GRCm39) A491V probably damaging Het
Myh2 A G 11: 67,077,438 (GRCm39) T858A probably benign Het
Net1 C T 13: 3,936,074 (GRCm39) probably null Het
Or52s1 T A 7: 102,861,111 (GRCm39) Y4N probably benign Het
Or5p76 T C 7: 108,122,423 (GRCm39) T245A probably benign Het
Platr25 A T 13: 62,821,623 (GRCm39) I110N possibly damaging Het
Plk5 T A 10: 80,198,879 (GRCm39) L412H probably damaging Het
Rasal1 A T 5: 120,812,790 (GRCm39) T605S probably benign Het
Ryr2 T A 13: 11,683,707 (GRCm39) D3119V probably damaging Het
Serpina1a G T 12: 103,820,017 (GRCm39) H387N probably benign Het
Serpina1d G T 12: 103,733,811 (GRCm39) N164K probably damaging Het
Smurf1 A G 5: 144,836,307 (GRCm39) Y69H probably damaging Het
Sod2 A G 17: 13,227,250 (GRCm39) K68R probably benign Het
Ssbp2 A G 13: 91,687,470 (GRCm39) N51S possibly damaging Het
Tcl1b1 A G 12: 105,130,663 (GRCm39) R49G probably benign Het
Tgfb1 A G 7: 25,396,350 (GRCm39) I214M probably benign Het
Tln1 A G 4: 43,547,525 (GRCm39) I812T probably damaging Het
Topaz1 T A 9: 122,577,419 (GRCm39) C110S possibly damaging Het
Ubap2l A G 3: 89,930,867 (GRCm39) F393L probably damaging Het
Wdr24 C A 17: 26,046,899 (GRCm39) Q651K probably damaging Het
Wdr7 A G 18: 63,911,322 (GRCm39) T905A possibly damaging Het
Zfyve26 A G 12: 79,285,109 (GRCm39) F2382S probably damaging Het
Other mutations in Vmn1r62
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01337:Vmn1r62 APN 7 5,679,144 (GRCm39) missense probably damaging 1.00
IGL01650:Vmn1r62 APN 7 5,679,024 (GRCm39) missense probably damaging 1.00
IGL02892:Vmn1r62 APN 7 5,679,202 (GRCm39) missense probably benign
IGL02970:Vmn1r62 APN 7 5,678,567 (GRCm39) missense possibly damaging 0.64
IGL03282:Vmn1r62 APN 7 5,678,547 (GRCm39) missense possibly damaging 0.93
R0470:Vmn1r62 UTSW 7 5,679,066 (GRCm39) nonsense probably null
R1416:Vmn1r62 UTSW 7 5,678,904 (GRCm39) missense probably damaging 1.00
R2149:Vmn1r62 UTSW 7 5,678,358 (GRCm39) missense probably benign 0.18
R4093:Vmn1r62 UTSW 7 5,678,943 (GRCm39) missense probably damaging 0.96
R4596:Vmn1r62 UTSW 7 5,678,306 (GRCm39) start gained probably benign
R4809:Vmn1r62 UTSW 7 5,678,866 (GRCm39) missense probably benign 0.41
R5669:Vmn1r62 UTSW 7 5,678,736 (GRCm39) nonsense probably null
R6262:Vmn1r62 UTSW 7 5,678,556 (GRCm39) missense probably damaging 1.00
R6312:Vmn1r62 UTSW 7 5,679,083 (GRCm39) missense possibly damaging 0.82
R7624:Vmn1r62 UTSW 7 5,678,600 (GRCm39) missense probably benign 0.01
R7710:Vmn1r62 UTSW 7 5,678,182 (GRCm39) start gained probably benign
R7896:Vmn1r62 UTSW 7 5,678,609 (GRCm39) missense probably damaging 1.00
R8117:Vmn1r62 UTSW 7 5,678,726 (GRCm39) missense possibly damaging 0.62
R8673:Vmn1r62 UTSW 7 5,678,277 (GRCm39) start gained probably benign
R8714:Vmn1r62 UTSW 7 5,678,629 (GRCm39) nonsense probably null
R8962:Vmn1r62 UTSW 7 5,678,601 (GRCm39) missense probably damaging 0.99
R9133:Vmn1r62 UTSW 7 5,679,062 (GRCm39) missense probably benign 0.01
R9246:Vmn1r62 UTSW 7 5,678,628 (GRCm39) missense probably damaging 1.00
R9360:Vmn1r62 UTSW 7 5,678,952 (GRCm39) missense probably damaging 0.99
RF007:Vmn1r62 UTSW 7 5,678,669 (GRCm39) missense probably benign 0.00
Predicted Primers PCR Primer
(F):5'- ATCATGTGCTCCACCTGTG -3'
(R):5'- TGACCACCAGCATCAGGATG -3'

Sequencing Primer
(F):5'- GTGTCCTCAGCACCTACCAG -3'
(R):5'- CTGCTCTGGTCTCAGCATGG -3'
Posted On 2018-06-06