Incidental Mutation 'IGL01069:Lsm12'
ID52217
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Lsm12
Ensembl Gene ENSMUSG00000020922
Gene NameLSM12 homolog
Synonyms
Accession Numbers
Is this an essential gene? Probably essential (E-score: 0.937) question?
Stock #IGL01069
Quality Score
Status
Chromosome11
Chromosomal Location102162497-102185296 bp(-) (GRCm38)
Type of Mutationutr 3 prime
DNA Base Change (assembly) T to C at 102164070 bp
ZygosityHeterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000102774 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000021297] [ENSMUST00000107156]
Predicted Effect probably benign
Transcript: ENSMUST00000021297
SMART Domains Protein: ENSMUSP00000021297
Gene: ENSMUSG00000020922

DomainStartEndE-ValueType
AD 78 165 5.73e-38 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000107156
SMART Domains Protein: ENSMUSP00000102774
Gene: ENSMUSG00000020922

DomainStartEndE-ValueType
AD 21 107 1.31e-32 SMART
Predicted Effect noncoding transcript
Transcript: ENSMUST00000137930
Predicted Effect noncoding transcript
Transcript: ENSMUST00000140429
Predicted Effect noncoding transcript
Transcript: ENSMUST00000153276
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 45 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
1110038F14Rik G A 15: 76,950,275 V124I probably damaging Het
1700123K08Rik C T 5: 138,562,489 A215T probably benign Het
Aen G A 7: 78,907,302 M299I probably damaging Het
Apc2 G A 10: 80,311,986 C929Y probably damaging Het
Arap2 T C 5: 62,649,856 H1156R probably benign Het
Arhgap9 A G 10: 127,328,952 T582A probably damaging Het
Ccdc57 T A 11: 120,861,259 H832L probably benign Het
Ces3b T C 8: 105,091,574 S92P probably benign Het
Ces5a A G 8: 93,525,544 probably null Het
Cfap206 C T 4: 34,721,562 S162N probably damaging Het
Cpb2 T A 14: 75,270,775 D225E probably damaging Het
Cpne8 C T 15: 90,615,110 probably null Het
Cux2 G A 5: 121,867,351 T924M possibly damaging Het
Dtl T A 1: 191,561,539 probably null Het
Dysf T A 6: 84,199,785 I1912N possibly damaging Het
Edc4 T A 8: 105,887,134 F369I probably benign Het
Fibcd1 T C 2: 31,821,519 E298G probably benign Het
Focad C A 4: 88,326,146 H788N unknown Het
Frem1 C T 4: 83,013,867 R199H probably benign Het
Gadl1 T C 9: 115,954,839 probably null Het
Hipk1 G A 3: 103,777,699 T200I possibly damaging Het
Ighv14-2 C T 12: 113,994,759 V21I possibly damaging Het
Kank4 A T 4: 98,778,395 I605N probably damaging Het
Krt88 T G 15: 101,453,627 *172G probably null Het
Lmf2 C A 15: 89,352,888 A408S probably benign Het
Myo3b A G 2: 70,245,391 I580V probably benign Het
Myt1 T C 2: 181,825,956 M1061T probably damaging Het
Nup133 G A 8: 123,930,982 R405* probably null Het
Olfr1032 A G 2: 86,008,547 Y257C probably damaging Het
Olfr1377 A T 11: 50,985,003 I101F possibly damaging Het
Olfr229 A T 9: 39,910,606 M268L possibly damaging Het
Pcnx A G 12: 81,918,144 R362G probably benign Het
Pomt2 G T 12: 87,110,304 T747K probably damaging Het
Rgma G A 7: 73,417,491 A165T probably damaging Het
Rhbdf2 T C 11: 116,601,751 D437G possibly damaging Het
Rpl5 T C 5: 107,907,279 probably null Het
Rtkn2 A G 10: 68,041,664 D518G probably benign Het
Sclt1 T C 3: 41,741,991 probably benign Het
Sidt2 C T 9: 45,943,077 V616I possibly damaging Het
Ska2 A G 11: 87,109,265 probably benign Het
Slc13a4 C A 6: 35,268,882 L609F probably damaging Het
Sorbs3 T C 14: 70,191,155 E390G probably damaging Het
Syt15 T C 14: 34,224,924 V220A possibly damaging Het
Tob1 T C 11: 94,214,055 F139S probably damaging Het
Yars2 C T 16: 16,306,542 R338* probably null Het
Other mutations in Lsm12
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL02637:Lsm12 APN 11 102164122 missense probably benign
IGL03276:Lsm12 APN 11 102182944 missense probably benign
R4513:Lsm12 UTSW 11 102167083 splice site probably null
R4818:Lsm12 UTSW 11 102167163 missense probably damaging 1.00
R7790:Lsm12 UTSW 11 102165169 intron probably null
R8049:Lsm12 UTSW 11 102165409 missense possibly damaging 0.81
Posted On2013-06-21