Incidental Mutation 'R6563:Vmn1r225'
ID |
522581 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Vmn1r225
|
Ensembl Gene |
ENSMUSG00000043537 |
Gene Name |
vomeronasal 1 receptor 225 |
Synonyms |
V1re5 |
MMRRC Submission |
044687-MU
|
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.066)
|
Stock # |
R6563 (G1)
|
Quality Score |
225.009 |
Status
|
Validated
|
Chromosome |
17 |
Chromosomal Location |
20722561-20723457 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
C to T
at 20722763 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Alanine to Valine
at position 68
(A68V)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000056068
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000061660]
|
AlphaFold |
Q8R2A5 |
Predicted Effect |
probably benign
Transcript: ENSMUST00000061660
AA Change: A68V
PolyPhen 2
Score 0.034 (Sensitivity: 0.95; Specificity: 0.82)
|
SMART Domains |
Protein: ENSMUSP00000056068 Gene: ENSMUSG00000043537 AA Change: A68V
Domain | Start | End | E-Value | Type |
Pfam:TAS2R
|
1 |
287 |
8.9e-15 |
PFAM |
Pfam:V1R
|
11 |
291 |
3.1e-24 |
PFAM |
|
Meta Mutation Damage Score |
0.1829 |
Coding Region Coverage |
- 1x: 100.0%
- 3x: 99.9%
- 10x: 99.4%
- 20x: 97.9%
|
Validation Efficiency |
100% (39/39) |
Allele List at MGI |
|
Other mutations in this stock |
Total: 39 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Arhgap11a |
A |
T |
2: 113,664,247 (GRCm39) |
C679S |
probably benign |
Het |
Atg4d |
C |
T |
9: 21,179,756 (GRCm39) |
L235F |
possibly damaging |
Het |
Cyp2d22 |
A |
T |
15: 82,256,113 (GRCm39) |
W174R |
probably damaging |
Het |
Cyp4a14 |
T |
A |
4: 115,349,283 (GRCm39) |
H259L |
probably benign |
Het |
Dennd3 |
A |
T |
15: 73,416,229 (GRCm39) |
H493L |
probably damaging |
Het |
Dnm1 |
T |
A |
2: 32,202,738 (GRCm39) |
D759V |
probably damaging |
Het |
Dvl1 |
T |
A |
4: 155,940,710 (GRCm39) |
N443K |
probably damaging |
Het |
Dync2h1 |
A |
G |
9: 7,120,819 (GRCm39) |
V2156A |
probably benign |
Het |
Enpp5 |
G |
A |
17: 44,396,155 (GRCm39) |
G356S |
probably damaging |
Het |
Ermp1 |
T |
C |
19: 29,601,178 (GRCm39) |
D523G |
probably damaging |
Het |
Fam83c |
A |
G |
2: 155,672,872 (GRCm39) |
V295A |
probably damaging |
Het |
Gphn |
T |
C |
12: 78,727,170 (GRCm39) |
|
probably null |
Het |
Irs1 |
T |
A |
1: 82,266,128 (GRCm39) |
N696I |
probably damaging |
Het |
Kmt5c |
A |
G |
7: 4,745,628 (GRCm39) |
Y96C |
probably damaging |
Het |
Krt77 |
G |
T |
15: 101,771,358 (GRCm39) |
T315N |
probably damaging |
Het |
L3mbtl3 |
A |
C |
10: 26,178,761 (GRCm39) |
|
probably null |
Het |
Lama3 |
A |
T |
18: 12,670,823 (GRCm39) |
Y2409F |
probably damaging |
Het |
Lrrc9 |
A |
G |
12: 72,533,169 (GRCm39) |
|
probably null |
Het |
Ltbp4 |
A |
T |
7: 27,008,488 (GRCm39) |
N1273K |
probably damaging |
Het |
Mfsd13b |
G |
A |
7: 120,594,690 (GRCm39) |
A321T |
probably damaging |
Het |
Mvb12b |
A |
T |
2: 33,715,128 (GRCm39) |
H167Q |
probably benign |
Het |
Myo1g |
T |
A |
11: 6,467,146 (GRCm39) |
N230Y |
possibly damaging |
Het |
Or7a41 |
A |
T |
10: 78,871,051 (GRCm39) |
R140S |
possibly damaging |
Het |
Prkar2b |
G |
T |
12: 32,043,785 (GRCm39) |
|
probably null |
Het |
Pwwp2a |
G |
T |
11: 43,596,592 (GRCm39) |
A586S |
possibly damaging |
Het |
Ryr1 |
A |
G |
7: 28,794,917 (GRCm39) |
V1150A |
possibly damaging |
Het |
Sh3bgr |
A |
G |
16: 96,007,143 (GRCm39) |
|
probably null |
Het |
Slk |
T |
C |
19: 47,624,908 (GRCm39) |
|
probably null |
Het |
Snx3 |
A |
G |
10: 42,402,032 (GRCm39) |
E82G |
possibly damaging |
Het |
Spring1 |
T |
C |
5: 118,397,047 (GRCm39) |
V92A |
possibly damaging |
Het |
Srcin1 |
A |
T |
11: 97,425,600 (GRCm39) |
Y486N |
possibly damaging |
Het |
Tecpr2 |
A |
G |
12: 110,895,521 (GRCm39) |
E336G |
probably benign |
Het |
Terf2ip |
G |
T |
8: 112,744,834 (GRCm39) |
V384F |
probably damaging |
Het |
Tnn |
T |
A |
1: 159,915,968 (GRCm39) |
S1250C |
probably damaging |
Het |
Tspoap1 |
A |
G |
11: 87,667,985 (GRCm39) |
E1263G |
possibly damaging |
Het |
Tubgcp5 |
A |
G |
7: 55,475,409 (GRCm39) |
R932G |
possibly damaging |
Het |
Utp25 |
C |
A |
1: 192,800,698 (GRCm39) |
R374L |
probably damaging |
Het |
Vmn1r175 |
A |
G |
7: 23,508,030 (GRCm39) |
I199T |
possibly damaging |
Het |
Vmn2r24 |
A |
T |
6: 123,781,137 (GRCm39) |
N448Y |
possibly damaging |
Het |
|
Other mutations in Vmn1r225 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL01093:Vmn1r225
|
APN |
17 |
20,723,081 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01830:Vmn1r225
|
APN |
17 |
20,722,717 (GRCm39) |
missense |
probably damaging |
0.96 |
IGL02943:Vmn1r225
|
APN |
17 |
20,722,567 (GRCm39) |
missense |
possibly damaging |
0.67 |
R0544:Vmn1r225
|
UTSW |
17 |
20,722,718 (GRCm39) |
missense |
probably benign |
0.44 |
R1126:Vmn1r225
|
UTSW |
17 |
20,722,588 (GRCm39) |
missense |
probably benign |
0.03 |
R1809:Vmn1r225
|
UTSW |
17 |
20,722,918 (GRCm39) |
missense |
probably benign |
0.04 |
R1928:Vmn1r225
|
UTSW |
17 |
20,723,071 (GRCm39) |
missense |
probably benign |
0.00 |
R2044:Vmn1r225
|
UTSW |
17 |
20,722,852 (GRCm39) |
missense |
possibly damaging |
0.50 |
R2191:Vmn1r225
|
UTSW |
17 |
20,723,147 (GRCm39) |
missense |
probably damaging |
0.98 |
R2206:Vmn1r225
|
UTSW |
17 |
20,722,611 (GRCm39) |
missense |
possibly damaging |
0.56 |
R2207:Vmn1r225
|
UTSW |
17 |
20,722,611 (GRCm39) |
missense |
possibly damaging |
0.56 |
R2680:Vmn1r225
|
UTSW |
17 |
20,723,055 (GRCm39) |
missense |
probably benign |
0.00 |
R3740:Vmn1r225
|
UTSW |
17 |
20,723,261 (GRCm39) |
missense |
possibly damaging |
0.56 |
R3807:Vmn1r225
|
UTSW |
17 |
20,723,114 (GRCm39) |
nonsense |
probably null |
|
R4196:Vmn1r225
|
UTSW |
17 |
20,723,237 (GRCm39) |
missense |
probably benign |
0.00 |
R4970:Vmn1r225
|
UTSW |
17 |
20,722,831 (GRCm39) |
missense |
possibly damaging |
0.74 |
R5129:Vmn1r225
|
UTSW |
17 |
20,723,378 (GRCm39) |
missense |
probably damaging |
1.00 |
R5130:Vmn1r225
|
UTSW |
17 |
20,723,047 (GRCm39) |
missense |
possibly damaging |
0.81 |
R5187:Vmn1r225
|
UTSW |
17 |
20,723,177 (GRCm39) |
missense |
probably damaging |
0.96 |
R5580:Vmn1r225
|
UTSW |
17 |
20,723,101 (GRCm39) |
missense |
probably damaging |
1.00 |
R6674:Vmn1r225
|
UTSW |
17 |
20,723,377 (GRCm39) |
missense |
probably benign |
0.06 |
R7003:Vmn1r225
|
UTSW |
17 |
20,723,416 (GRCm39) |
missense |
probably null |
0.01 |
R7143:Vmn1r225
|
UTSW |
17 |
20,722,646 (GRCm39) |
missense |
probably benign |
0.22 |
R7422:Vmn1r225
|
UTSW |
17 |
20,723,059 (GRCm39) |
missense |
probably benign |
0.25 |
R7651:Vmn1r225
|
UTSW |
17 |
20,722,611 (GRCm39) |
missense |
possibly damaging |
0.56 |
R7952:Vmn1r225
|
UTSW |
17 |
20,722,589 (GRCm39) |
missense |
probably damaging |
0.98 |
R8097:Vmn1r225
|
UTSW |
17 |
20,722,611 (GRCm39) |
missense |
possibly damaging |
0.56 |
R8696:Vmn1r225
|
UTSW |
17 |
20,723,419 (GRCm39) |
missense |
probably damaging |
1.00 |
R8823:Vmn1r225
|
UTSW |
17 |
20,722,823 (GRCm39) |
missense |
probably benign |
0.08 |
R9007:Vmn1r225
|
UTSW |
17 |
20,723,449 (GRCm39) |
missense |
probably damaging |
0.96 |
R9041:Vmn1r225
|
UTSW |
17 |
20,722,577 (GRCm39) |
missense |
possibly damaging |
0.53 |
R9147:Vmn1r225
|
UTSW |
17 |
20,722,577 (GRCm39) |
missense |
possibly damaging |
0.53 |
R9148:Vmn1r225
|
UTSW |
17 |
20,722,577 (GRCm39) |
missense |
possibly damaging |
0.53 |
R9312:Vmn1r225
|
UTSW |
17 |
20,722,960 (GRCm39) |
missense |
probably benign |
0.39 |
R9401:Vmn1r225
|
UTSW |
17 |
20,722,912 (GRCm39) |
missense |
probably damaging |
1.00 |
R9401:Vmn1r225
|
UTSW |
17 |
20,722,911 (GRCm39) |
nonsense |
probably null |
|
R9488:Vmn1r225
|
UTSW |
17 |
20,722,793 (GRCm39) |
missense |
probably damaging |
0.99 |
Z1177:Vmn1r225
|
UTSW |
17 |
20,722,753 (GRCm39) |
missense |
possibly damaging |
0.65 |
|
Predicted Primers |
PCR Primer
(F):5'- ATGGAGTCCAGGAACATGGC -3'
(R):5'- ATCCAGCAGAGTAAAATCAAGAGTC -3'
Sequencing Primer
(F):5'- GAACATGGCAATAGGAATCATACTC -3'
(R):5'- GACACTCAAGAGACAGGT -3'
|
Posted On |
2018-06-06 |