|Institutional Source||Beutler Lab|
|Gene Name||H2A histone family, member Y2|
|Is this an essential gene?||Possibly non essential (E-score: 0.472)|
|Stock #||R6498 (G1)|
|Chromosomal Location||61738665-61784147 bp(-) (GRCm38)|
|Type of Mutation||missense|
|DNA Base Change (assembly)||C to A at 61757835 bp|
|Amino Acid Change||Valine to Phenylalanine at position 21 (V21F)|
|Ref Sequence||ENSEMBL: ENSMUSP00000020283 (fasta)|
|Gene Model||predicted gene model for transcript(s): [ENSMUST00000020283]|
|Predicted Effect||probably damaging
AA Change: V21F
PolyPhen 2 Score 0.990 (Sensitivity: 0.72; Specificity: 0.97)
AA Change: V21F
|Meta Mutation Damage Score||0.214|
|Coding Region Coverage||
|Validation Efficiency||100% (37/37)|
FUNCTION: Histones are basic nuclear proteins that are responsible for the nucleosome structure of the chromosomal fiber in eukaryotes. Nucleosomes consist of approximately 146 bp of DNA wrapped around a histone octamer composed of pairs of each of the four core histones (H2A, H2B, H3, and H4). The chromatin fiber is further compacted through the interaction of a linker histone, H1, with the DNA between the nucleosomes to form higher order chromatin structures. This gene encodes a replication-independent histone that is a member of the histone H2A family. It replaces conventional H2A histones in a subset of nucleosomes where it represses transcription and may participate in stable X chromosome inactivation. [provided by RefSeq, Nov 2015]
PHENOTYPE: Mice homozygous for a knock-out allele do not exhibit any developmental or reproductive abnormalities. [provided by MGI curators]
|Allele List at MGI|
|Other mutations in this stock||
|Other mutations in H2afy2||
(F):5'- GCGGGAATTGGGAGATTCAC -3'
(R):5'- AGCCAGAAATGTCACAATGTGTC -3'
(F):5'- TTGGGAGATTCACAGCAGCCTG -3'
(R):5'- TGTGTCCTAAAGCCACACTGATG -3'