Incidental Mutation 'R6581:Or52a5b'
ID |
523436 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Or52a5b
|
Ensembl Gene |
ENSMUSG00000058662 |
Gene Name |
olfactory receptor family 52 subfamily A member 5B |
Synonyms |
MOR22-2, GA_x6K02T2PBJ9-6494485-6493535, 3'[b]3, Olfr69 |
MMRRC Submission |
044705-MU
|
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.061)
|
Stock # |
R6581 (G1)
|
Quality Score |
225.009 |
Status
|
Not validated
|
Chromosome |
7 |
Chromosomal Location |
103416484-103420801 bp(-) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
T to C
at 103417428 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Isoleucine to Valine
at position 59
(I59V)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000102491
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000106878]
|
AlphaFold |
E9Q7C5 |
Predicted Effect |
probably benign
Transcript: ENSMUST00000106878
AA Change: I59V
PolyPhen 2
Score 0.010 (Sensitivity: 0.96; Specificity: 0.77)
|
SMART Domains |
Protein: ENSMUSP00000102491 Gene: ENSMUSG00000058662 AA Change: I59V
Domain | Start | End | E-Value | Type |
Pfam:7tm_4
|
33 |
313 |
1.9e-101 |
PFAM |
Pfam:7TM_GPCR_Srx
|
34 |
237 |
1.1e-7 |
PFAM |
Pfam:7TM_GPCR_Srsx
|
37 |
260 |
3.6e-7 |
PFAM |
Pfam:7tm_1
|
43 |
295 |
6.6e-15 |
PFAM |
|
Coding Region Coverage |
- 1x: 99.9%
- 3x: 99.6%
- 10x: 98.0%
- 20x: 94.2%
|
Validation Efficiency |
|
MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 27 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Aldh8a1 |
G |
A |
10: 21,256,741 (GRCm39) |
V51M |
probably damaging |
Het |
Cdh17 |
A |
T |
4: 11,799,615 (GRCm39) |
I471F |
probably damaging |
Het |
Dnajb7 |
T |
A |
15: 81,292,226 (GRCm39) |
E37V |
probably damaging |
Het |
Dpy19l1 |
T |
A |
9: 24,359,160 (GRCm39) |
I337F |
possibly damaging |
Het |
Etv5 |
C |
T |
16: 22,258,449 (GRCm39) |
|
probably benign |
Het |
Gbp2b |
T |
A |
3: 142,313,999 (GRCm39) |
Y426* |
probably null |
Het |
Gm21103 |
A |
T |
14: 17,484,809 (GRCm39) |
N78K |
probably damaging |
Het |
Helz2 |
A |
G |
2: 180,871,172 (GRCm39) |
V2755A |
probably damaging |
Het |
Itga9 |
A |
T |
9: 118,487,632 (GRCm39) |
E238D |
probably benign |
Het |
Itgb8 |
A |
T |
12: 119,126,950 (GRCm39) |
C736S |
probably benign |
Het |
Luzp1 |
A |
G |
4: 136,267,942 (GRCm39) |
E55G |
probably damaging |
Het |
Mrtfa |
A |
G |
15: 80,900,574 (GRCm39) |
L589P |
probably damaging |
Het |
Ms4a4d |
G |
A |
19: 11,532,204 (GRCm39) |
V117M |
probably damaging |
Het |
Odad2 |
C |
T |
18: 7,129,560 (GRCm39) |
V873I |
possibly damaging |
Het |
Or2f1 |
T |
C |
6: 42,721,013 (GRCm39) |
L14P |
probably damaging |
Het |
Or3a1d |
A |
G |
11: 74,238,032 (GRCm39) |
F126S |
probably damaging |
Het |
Prl7a1 |
A |
T |
13: 27,817,612 (GRCm39) |
D217E |
probably damaging |
Het |
Slc12a5 |
T |
C |
2: 164,829,035 (GRCm39) |
F525S |
probably damaging |
Het |
Smyd5 |
G |
A |
6: 85,409,005 (GRCm39) |
D7N |
probably damaging |
Het |
Spata18 |
G |
T |
5: 73,826,859 (GRCm39) |
R152L |
probably benign |
Het |
Thbd |
A |
G |
2: 148,248,192 (GRCm39) |
S559P |
probably benign |
Het |
Tiam2 |
CGGG |
CGGGG |
17: 3,464,897 (GRCm39) |
|
probably null |
Het |
Tnpo2 |
C |
A |
8: 85,782,033 (GRCm39) |
P874Q |
probably damaging |
Het |
Uchl4 |
A |
T |
9: 64,143,075 (GRCm39) |
E185D |
possibly damaging |
Het |
Vmn1r158 |
G |
A |
7: 22,489,465 (GRCm39) |
T248I |
possibly damaging |
Het |
Vmn1r5 |
T |
C |
6: 56,962,366 (GRCm39) |
F14L |
probably benign |
Het |
Yaf2 |
T |
C |
15: 93,184,295 (GRCm39) |
T101A |
probably benign |
Het |
|
Other mutations in Or52a5b |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL03381:Or52a5b
|
APN |
7 |
103,417,044 (GRCm39) |
missense |
probably benign |
0.00 |
R0314:Or52a5b
|
UTSW |
7 |
103,417,388 (GRCm39) |
missense |
probably damaging |
1.00 |
R2158:Or52a5b
|
UTSW |
7 |
103,417,168 (GRCm39) |
nonsense |
probably null |
|
R4839:Or52a5b
|
UTSW |
7 |
103,416,961 (GRCm39) |
missense |
possibly damaging |
0.94 |
R5574:Or52a5b
|
UTSW |
7 |
103,417,323 (GRCm39) |
missense |
possibly damaging |
0.96 |
R6025:Or52a5b
|
UTSW |
7 |
103,417,416 (GRCm39) |
missense |
probably benign |
0.01 |
R6792:Or52a5b
|
UTSW |
7 |
103,417,346 (GRCm39) |
missense |
possibly damaging |
0.75 |
R7121:Or52a5b
|
UTSW |
7 |
103,416,940 (GRCm39) |
nonsense |
probably null |
|
R7178:Or52a5b
|
UTSW |
7 |
103,417,182 (GRCm39) |
nonsense |
probably null |
|
R7378:Or52a5b
|
UTSW |
7 |
103,417,137 (GRCm39) |
missense |
probably benign |
0.01 |
R7449:Or52a5b
|
UTSW |
7 |
103,417,026 (GRCm39) |
missense |
probably benign |
|
R7573:Or52a5b
|
UTSW |
7 |
103,416,677 (GRCm39) |
missense |
probably benign |
|
R9206:Or52a5b
|
UTSW |
7 |
103,417,478 (GRCm39) |
missense |
probably benign |
0.00 |
R9208:Or52a5b
|
UTSW |
7 |
103,417,478 (GRCm39) |
missense |
probably benign |
0.00 |
R9536:Or52a5b
|
UTSW |
7 |
103,416,779 (GRCm39) |
missense |
probably damaging |
1.00 |
|
Predicted Primers |
PCR Primer
(F):5'- TGCAGATAGCCACATAGCGATC -3'
(R):5'- CTGACAGGTTCAGCATGATCAAG -3'
Sequencing Primer
(F):5'- CATAGCGATCCAGAGCCATGG -3'
(R):5'- GCATGATCAAGTTCAATGGCTCAGTC -3'
|
Posted On |
2018-06-22 |