Incidental Mutation 'R6585:Or5ae1'
| ID |
524342 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Or5ae1
|
| Ensembl Gene |
ENSMUSG00000116179 |
| Gene Name |
olfactory receptor family 5 subfamily AE member 1 |
| Synonyms |
Olfr290, GA_x6K02T2NHDJ-11170115-11169168, MOR254-1 |
| MMRRC Submission |
044709-MU
|
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.237)
|
| Stock # |
R6585 (G1)
|
| Quality Score |
225.009 |
|
Status
|
Validated
|
| Chromosome |
7 |
| Chromosomal Location |
84564989-84565936 bp(+) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
A to T
at 84565670 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Isoleucine to Phenylalanine
at position 228
(I228F)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000149523
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000073468]
[ENSMUST00000214501]
[ENSMUST00000216184]
[ENSMUST00000216367]
|
| AlphaFold |
no structure available at present |
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000073468
AA Change: I228F
PolyPhen 2
Score 0.991 (Sensitivity: 0.71; Specificity: 0.97)
|
| SMART Domains |
Protein: ENSMUSP00000073172
Gene: ENSMUSG00000116179
AA Change: I228F
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
31 |
309 |
8.4e-53 |
PFAM |
|
Pfam:7TM_GPCR_Srsx
|
35 |
304 |
1.2e-10 |
PFAM |
|
Pfam:7tm_1
|
41 |
291 |
1.3e-30 |
PFAM |
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000173463
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000214501
AA Change: I228F
PolyPhen 2
Score 0.991 (Sensitivity: 0.71; Specificity: 0.97)
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000216184
AA Change: I228F
PolyPhen 2
Score 0.991 (Sensitivity: 0.71; Specificity: 0.97)
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000216367
AA Change: I228F
PolyPhen 2
Score 0.991 (Sensitivity: 0.71; Specificity: 0.97)
|
| Meta Mutation Damage Score |
0.6467 |
| Coding Region Coverage |
- 1x: 99.9%
- 3x: 99.6%
- 10x: 98.1%
- 20x: 94.4%
|
| Validation Efficiency |
97% (30/31) |
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 30 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| 4930522L14Rik |
C |
T |
5: 109,885,534 (GRCm39) |
C108Y |
probably damaging |
Het |
| Adam1b |
G |
T |
5: 121,639,250 (GRCm39) |
D598E |
probably benign |
Het |
| Agr2 |
G |
A |
12: 36,045,625 (GRCm39) |
R37Q |
probably benign |
Het |
| Ascc3 |
A |
G |
10: 50,718,273 (GRCm39) |
K1989E |
probably benign |
Het |
| Chd1l |
A |
G |
3: 97,505,088 (GRCm39) |
F160L |
probably damaging |
Het |
| Ciita |
T |
A |
16: 10,329,609 (GRCm39) |
V628E |
probably benign |
Het |
| Defa38 |
A |
G |
8: 21,585,248 (GRCm39) |
C65R |
possibly damaging |
Het |
| Dis3l2 |
T |
A |
1: 86,673,216 (GRCm39) |
I69N |
probably damaging |
Het |
| Dnase1l1 |
C |
T |
X: 73,320,644 (GRCm39) |
|
probably null |
Homo |
| Elp2 |
T |
C |
18: 24,758,606 (GRCm39) |
L503S |
probably damaging |
Het |
| Fcgbp |
A |
T |
7: 27,813,404 (GRCm39) |
Q2313L |
possibly damaging |
Het |
| Gpr155 |
A |
T |
2: 73,179,989 (GRCm39) |
I157N |
probably damaging |
Het |
| H2bc18 |
A |
T |
3: 96,177,413 (GRCm39) |
T116S |
probably benign |
Het |
| Kcnj1 |
T |
C |
9: 32,308,557 (GRCm39) |
V307A |
probably benign |
Het |
| Lama3 |
G |
A |
18: 12,552,314 (GRCm39) |
|
probably null |
Het |
| Lrp6 |
A |
T |
6: 134,484,521 (GRCm39) |
Y367* |
probably null |
Het |
| Ms4a14 |
T |
A |
19: 11,281,009 (GRCm39) |
Q516H |
unknown |
Het |
| Nprl3 |
C |
T |
11: 32,184,812 (GRCm39) |
R399Q |
probably benign |
Het |
| Or13c3 |
A |
T |
4: 52,856,192 (GRCm39) |
M107K |
possibly damaging |
Het |
| Park7 |
G |
T |
4: 150,989,721 (GRCm39) |
Q80K |
probably benign |
Het |
| Pramel15 |
C |
A |
4: 144,103,600 (GRCm39) |
L175F |
possibly damaging |
Het |
| Pramel52-ps |
C |
T |
5: 94,529,415 (GRCm39) |
P62S |
probably benign |
Het |
| Ptgs2 |
T |
C |
1: 149,979,738 (GRCm39) |
V281A |
possibly damaging |
Het |
| Rprd1a |
T |
C |
18: 24,639,720 (GRCm39) |
|
probably null |
Het |
| Speer4f2 |
A |
G |
5: 17,579,420 (GRCm39) |
E73G |
probably damaging |
Het |
| Spta1 |
T |
C |
1: 174,006,251 (GRCm39) |
W138R |
probably damaging |
Het |
| U2surp |
T |
C |
9: 95,354,124 (GRCm39) |
E838G |
probably damaging |
Het |
| Urb2 |
G |
T |
8: 124,757,864 (GRCm39) |
E1190D |
probably damaging |
Het |
| Usp19 |
G |
T |
9: 108,376,926 (GRCm39) |
L1165F |
probably damaging |
Het |
| Zfp27 |
G |
A |
7: 29,595,818 (GRCm39) |
T49I |
possibly damaging |
Het |
|
| Other mutations in Or5ae1 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL00088:Or5ae1
|
APN |
7 |
84,565,578 (GRCm39) |
missense |
probably damaging |
0.99 |
|
IGL01322:Or5ae1
|
APN |
7 |
84,565,590 (GRCm39) |
missense |
probably damaging |
0.99 |
|
IGL01834:Or5ae1
|
APN |
7 |
84,565,860 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02556:Or5ae1
|
APN |
7 |
84,565,567 (GRCm39) |
nonsense |
probably null |
|
|
IGL03246:Or5ae1
|
APN |
7 |
84,565,919 (GRCm39) |
missense |
probably benign |
0.03 |
|
IGL03255:Or5ae1
|
APN |
7 |
84,565,725 (GRCm39) |
missense |
possibly damaging |
0.95 |
|
R0322:Or5ae1
|
UTSW |
7 |
84,565,521 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1253:Or5ae1
|
UTSW |
7 |
84,565,917 (GRCm39) |
missense |
probably benign |
|
|
R1652:Or5ae1
|
UTSW |
7 |
84,565,728 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1673:Or5ae1
|
UTSW |
7 |
84,565,325 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R1891:Or5ae1
|
UTSW |
7 |
84,565,461 (GRCm39) |
missense |
possibly damaging |
0.93 |
|
R1895:Or5ae1
|
UTSW |
7 |
84,565,487 (GRCm39) |
missense |
probably benign |
0.01 |
|
R1946:Or5ae1
|
UTSW |
7 |
84,565,487 (GRCm39) |
missense |
probably benign |
0.01 |
|
R2128:Or5ae1
|
UTSW |
7 |
84,565,701 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4435:Or5ae1
|
UTSW |
7 |
84,565,229 (GRCm39) |
missense |
probably benign |
0.45 |
|
R4822:Or5ae1
|
UTSW |
7 |
84,565,634 (GRCm39) |
missense |
possibly damaging |
0.81 |
|
R4834:Or5ae1
|
UTSW |
7 |
84,565,491 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5354:Or5ae1
|
UTSW |
7 |
84,565,357 (GRCm39) |
nonsense |
probably null |
|
|
R5644:Or5ae1
|
UTSW |
7 |
84,565,327 (GRCm39) |
missense |
probably benign |
0.15 |
|
R5650:Or5ae1
|
UTSW |
7 |
84,565,626 (GRCm39) |
missense |
possibly damaging |
0.50 |
|
R5708:Or5ae1
|
UTSW |
7 |
84,565,391 (GRCm39) |
missense |
possibly damaging |
0.56 |
|
R7774:Or5ae1
|
UTSW |
7 |
84,565,739 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R8126:Or5ae1
|
UTSW |
7 |
84,565,114 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8443:Or5ae1
|
UTSW |
7 |
84,565,787 (GRCm39) |
missense |
probably benign |
0.00 |
|
R8709:Or5ae1
|
UTSW |
7 |
84,565,671 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8729:Or5ae1
|
UTSW |
7 |
84,565,523 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R8779:Or5ae1
|
UTSW |
7 |
84,565,397 (GRCm39) |
missense |
possibly damaging |
0.56 |
|
R8810:Or5ae1
|
UTSW |
7 |
84,565,626 (GRCm39) |
missense |
possibly damaging |
0.50 |
|
| Predicted Primers |
PCR Primer
(F):5'- CAGCTGGGTTTCTGAACTCC -3'
(R):5'- CATGGGAGTAATGACCCCATAC -3'
Sequencing Primer
(F):5'- GAACTCCTTTGTCCACACAATG -3'
(R):5'- CCATACAACATAGAGATGAGTCTGTC -3'
|
| Posted On |
2018-06-22 |
Incidental Mutation