Incidental Mutation 'R6640:Gm10020'
ID525744
Institutional Source Beutler Lab
Gene Symbol Gm10020
Ensembl Gene ENSMUSG00000057262
Gene Namepredicted pseudogene 10020
Synonyms
MMRRC Submission
Accession Numbers
Is this an essential gene? Not available question?
Stock #R6640 (G1)
Quality Score187.009
Status Not validated
Chromosome15
Chromosomal Location52477614-52478228 bp(-) (GRCm38)
Type of Mutationexon
DNA Base Change (assembly) G to T at 52477620 bp
ZygosityHeterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000130678 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000081993]
Predicted Effect noncoding transcript
Transcript: ENSMUST00000081993
SMART Domains Protein: ENSMUSP00000130678
Gene: ENSMUSG00000057262

DomainStartEndE-ValueType
Pfam:Ribosomal_L15e 2 193 4e-101 PFAM
Coding Region Coverage
  • 1x: 99.9%
  • 3x: 99.6%
  • 10x: 97.9%
  • 20x: 93.6%
Validation Efficiency 97% (31/32)
Allele List at MGI
Other mutations in this stock
Total: 34 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
A2ml1 A T 6: 128,553,285 N936K probably benign Het
Abca2 A T 2: 25,447,003 Y2318F possibly damaging Het
Aldh1b1 A G 4: 45,803,868 T469A possibly damaging Het
Ccdc136 A G 6: 29,412,960 D382G possibly damaging Het
Dapk1 A G 13: 60,716,814 K141E probably damaging Het
Dnah6 A T 6: 73,024,293 W3973R probably damaging Het
Dock10 G T 1: 80,533,838 S1518* probably null Het
Doxl2 A G 6: 48,977,671 D581G probably benign Het
Elovl5 C A 9: 77,979,913 Y195* probably null Het
Fbxl21 T A 13: 56,537,009 W309R probably damaging Het
Gm10801 C CGTG 2: 98,663,807 probably null Het
Gpx1 A G 9: 108,340,096 D133G probably damaging Het
Hoxd1 T A 2: 74,763,262 V54E probably damaging Het
Kcnh3 T C 15: 99,241,768 V876A probably benign Het
Klri2 G C 6: 129,732,195 F231L probably benign Het
Mogat1 T G 1: 78,523,774 S158R probably damaging Het
Myo1c C T 11: 75,671,635 P918S probably benign Het
Olfr1008 T A 2: 85,689,935 C169S probably damaging Het
Olfr695 T A 7: 106,714,040 I214F probably damaging Het
Otog G A 7: 46,261,743 A673T possibly damaging Het
Pigm T C 1: 172,377,687 V330A probably damaging Het
Rab33b A G 3: 51,484,479 T50A possibly damaging Het
Raver2 C T 4: 101,131,303 P371L probably damaging Het
Sh3rf2 T A 18: 42,101,640 Y163N probably damaging Het
Slc1a1 T C 19: 28,894,570 probably null Het
Slc6a18 T A 13: 73,664,282 Y563F possibly damaging Het
Sp3 A G 2: 72,971,114 L185P possibly damaging Het
Thbs2 T C 17: 14,673,368 D850G possibly damaging Het
Tmem161b C A 13: 84,222,418 probably benign Het
Tmtc2 T A 10: 105,573,749 M1L probably benign Het
Trpm2 C T 10: 77,937,826 R585Q probably benign Het
Trpm3 T A 19: 22,978,582 I1126K probably damaging Het
Ugt1a6b A C 1: 88,107,794 T285P probably benign Het
Vps13b A G 15: 35,617,696 T1181A possibly damaging Het
Other mutations in Gm10020
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL02367:Gm10020 APN 15 52477972 exon noncoding transcript
R5080:Gm10020 UTSW 15 52478050 exon noncoding transcript
R5231:Gm10020 UTSW 15 52478044 exon noncoding transcript
R5569:Gm10020 UTSW 15 52478228 exon noncoding transcript
R6516:Gm10020 UTSW 15 52477804 exon noncoding transcript
Predicted Primers PCR Primer
(F):5'- GTGTTACATCCTGATCACAGCTTC -3'
(R):5'- GAAATCCTGACACCCAGTGG -3'

Sequencing Primer
(F):5'- AGCTTCATTGCAGTAGGACC -3'
(R):5'- TCCTGACACCCAGTGGATCAC -3'
Posted On2018-06-22