Incidental Mutation 'R6698:Or5d20-ps1'
ID 528638
Institutional Source Beutler Lab
Gene Symbol Or5d20-ps1
Ensembl Gene ENSMUSG00000046590
Gene Name olfactory receptor family 5 subfamily D member 20, pseudogene 1
Synonyms MOR174-7, Olfr1165-ps, GA_x6K02T2Q125-49593880-49592930
MMRRC Submission 044816-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.090) question?
Stock # R6698 (G1)
Quality Score 129.008
Status Validated
Chromosome 2
Chromosomal Location 87931380-87932329 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to G at 87931561 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Phenylalanine to Leucine at position 257 (F257L)
Ref Sequence ENSEMBL: ENSMUSP00000149054 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000117860]
AlphaFold no structure available at present
Predicted Effect unknown
Transcript: ENSMUST00000117860
AA Change: F257L
Coding Region Coverage
  • 1x: 99.9%
  • 3x: 99.6%
  • 10x: 98.0%
  • 20x: 94.0%
Validation Efficiency 95% (40/42)
Allele List at MGI
Other mutations in this stock
Total: 39 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Brca2 T C 5: 150,455,859 (GRCm39) V200A probably damaging Het
Camk2g T A 14: 20,792,776 (GRCm39) K393* probably null Het
Catsperb T A 12: 101,475,466 (GRCm39) F337I probably damaging Het
Cdk17 T C 10: 93,064,540 (GRCm39) Y270H probably damaging Het
Col5a3 C T 9: 20,690,329 (GRCm39) G1162R probably damaging Het
Col6a5 T A 9: 105,811,374 (GRCm39) N715I unknown Het
Fancg A G 4: 43,007,034 (GRCm39) S248P probably benign Het
Flvcr1 T C 1: 190,757,929 (GRCm39) Y79C probably damaging Het
Gabrp A G 11: 33,507,017 (GRCm39) S198P probably damaging Het
Gask1b A G 3: 79,843,902 (GRCm39) I10V probably damaging Het
Glp1r A G 17: 31,155,375 (GRCm39) Y454C probably damaging Het
Gpr158 A C 2: 21,831,921 (GRCm39) D1007A probably damaging Het
Gsdmc3 A G 15: 63,732,120 (GRCm39) F302S possibly damaging Het
Gsdmc4 T A 15: 63,765,613 (GRCm39) D312V probably benign Het
Itga5 T C 15: 103,259,808 (GRCm39) Y663C probably benign Het
Kif1b A T 4: 149,359,413 (GRCm39) M108K probably damaging Het
Klf11 T G 12: 24,703,618 (GRCm39) S18A probably damaging Het
Lmtk2 T C 5: 144,111,737 (GRCm39) V819A probably benign Het
Lrba A G 3: 86,211,732 (GRCm39) M451V probably damaging Het
Lrp1b T C 2: 41,192,958 (GRCm39) D488G probably damaging Het
Mark4 T C 7: 19,163,362 (GRCm39) N589S probably benign Het
Mis12 T C 11: 70,916,012 (GRCm39) F15S probably damaging Het
Nif3l1 A G 1: 58,489,648 (GRCm39) D179G probably benign Het
Nlrx1 A G 9: 44,177,104 (GRCm39) W3R probably damaging Het
Nup210l G A 3: 90,089,815 (GRCm39) S1194N possibly damaging Het
Or13m2-ps1 A T 6: 42,778,136 (GRCm39) T154S probably benign Het
Pnkd T A 1: 74,389,836 (GRCm39) L320Q probably damaging Het
Prkn A G 17: 11,286,183 (GRCm39) probably null Het
Rcc2 G A 4: 140,429,586 (GRCm39) C40Y probably benign Homo
Rilpl2 C T 5: 124,607,843 (GRCm39) E126K probably damaging Het
Rpn2 T C 2: 157,139,330 (GRCm39) I208T possibly damaging Het
Skint4 G T 4: 111,977,096 (GRCm39) C170F probably damaging Het
Synj1 C G 16: 90,757,340 (GRCm39) V877L probably damaging Het
Tcp11 A T 17: 28,290,804 (GRCm39) I106N possibly damaging Het
Tg A G 15: 66,711,211 (GRCm39) Y991C probably damaging Het
Trib3 A G 2: 152,180,339 (GRCm39) S285P probably damaging Het
Wdr49 A T 3: 75,336,673 (GRCm39) W345R probably benign Het
Wnt5a A G 14: 28,240,420 (GRCm39) Y190C possibly damaging Het
Xpo1 A G 11: 23,244,040 (GRCm39) E955G probably benign Het
Other mutations in Or5d20-ps1
AlleleSourceChrCoordTypePredicted EffectPPH Score
R4378:Or5d20-ps1 UTSW 2 87,931,829 (GRCm39) missense unknown
R5078:Or5d20-ps1 UTSW 2 87,931,879 (GRCm39) missense probably benign 0.03
R6373:Or5d20-ps1 UTSW 2 87,932,189 (GRCm39) missense possibly damaging 0.73
R6736:Or5d20-ps1 UTSW 2 87,931,947 (GRCm39) missense probably benign 0.03
R7164:Or5d20-ps1 UTSW 2 87,932,176 (GRCm39) missense probably damaging 0.97
R7285:Or5d20-ps1 UTSW 2 87,932,049 (GRCm39) missense probably damaging 1.00
R7807:Or5d20-ps1 UTSW 2 87,931,909 (GRCm39) missense probably benign 0.00
R8040:Or5d20-ps1 UTSW 2 87,931,703 (GRCm39) missense unknown
R8509:Or5d20-ps1 UTSW 2 87,931,866 (GRCm39) missense probably benign 0.16
R9047:Or5d20-ps1 UTSW 2 87,931,416 (GRCm39) missense unknown
Predicted Primers PCR Primer
(F):5'- GTGAAAAGCAGTATACATTCAAGGC -3'
(R):5'- TCAGCCAAGTGGTATGTTTAACC -3'

Sequencing Primer
(F):5'- AGCAGTATACATTCAAGGCAAATG -3'
(R):5'- GCCAAGTGGTATGTTTAACCATTTC -3'
Posted On 2018-07-24