Incidental Mutation 'IGL01108:Mgrn1'
ID52931
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Mgrn1
Ensembl Gene ENSMUSG00000022517
Gene Namemahogunin, ring finger 1
Synonyms2610042J20Rik, nc
Accession Numbers
Is this an essential gene? Non essential (E-score: 0.000) question?
Stock #IGL01108
Quality Score
Status
Chromosome16
Chromosomal Location4886249-4938296 bp(+) (GRCm38)
Type of Mutationcritical splice donor site (1 bp from exon)
DNA Base Change (assembly) G to T at 4916155 bp
ZygosityHeterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000155425 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000023159] [ENSMUST00000070658] [ENSMUST00000229038] [ENSMUST00000230990]
Predicted Effect probably null
Transcript: ENSMUST00000023159
SMART Domains Protein: ENSMUSP00000023159
Gene: ENSMUSG00000022517

DomainStartEndE-ValueType
low complexity region 205 216 N/A INTRINSIC
low complexity region 268 278 N/A INTRINSIC
RING 279 317 4.58e-4 SMART
low complexity region 349 360 N/A INTRINSIC
low complexity region 443 454 N/A INTRINSIC
Predicted Effect probably null
Transcript: ENSMUST00000070658
SMART Domains Protein: ENSMUSP00000068314
Gene: ENSMUSG00000022517

DomainStartEndE-ValueType
low complexity region 204 215 N/A INTRINSIC
low complexity region 267 277 N/A INTRINSIC
RING 278 316 4.58e-4 SMART
low complexity region 348 359 N/A INTRINSIC
low complexity region 442 453 N/A INTRINSIC
Predicted Effect probably null
Transcript: ENSMUST00000229038
Predicted Effect noncoding transcript
Transcript: ENSMUST00000230220
Predicted Effect noncoding transcript
Transcript: ENSMUST00000230653
Predicted Effect probably null
Transcript: ENSMUST00000230990
Coding Region Coverage
Validation Efficiency
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] Mahogunin (MGRN1) is a C3HC4 RING-containing protein with E3 ubiquitin ligase activity in vitro.[supplied by OMIM, Apr 2004]
PHENOTYPE: Homozygotes for mutant alleles exhibit darkening of agouti hair and suppression of the obesity associated with certain agouti mutations. Homozygotes for an induced null mutation also have curly whiskers and develop a progressive spongiform neuropathology. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 33 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Asah2 A G 19: 32,008,681 probably benign Het
Baz1a A G 12: 54,916,731 I856T probably benign Het
Cblb T A 16: 52,047,451 probably null Het
Cpq A G 15: 33,497,287 Q391R probably benign Het
Dnah9 T A 11: 65,849,980 T4127S possibly damaging Het
Dync2h1 A G 9: 7,176,771 S63P possibly damaging Het
Elmsan1 T C 12: 84,173,691 E163G probably damaging Het
Ercc3 T C 18: 32,264,585 V623A probably damaging Het
Fbxw9 A G 8: 85,065,977 probably benign Het
Gorasp2 T A 2: 70,678,578 S133R probably damaging Het
Gtf2h1 G A 7: 46,812,498 A307T probably damaging Het
Hk1 T C 10: 62,296,708 K186R probably benign Het
Itga11 A G 9: 62,757,621 E596G probably benign Het
Kcnj13 T C 1: 87,386,937 I188V probably benign Het
Klhl18 A T 9: 110,428,686 M492K probably damaging Het
Mctp2 T C 7: 72,185,815 T545A probably damaging Het
Olfm4 T C 14: 80,021,899 V529A probably benign Het
Olfr275 C T 4: 52,825,727 T110I probably damaging Het
Parp4 T G 14: 56,607,440 I596S probably benign Het
Plppr3 T A 10: 79,867,521 D43V probably damaging Het
Prss51 A T 14: 64,095,984 K14I probably damaging Het
Prss58 A G 6: 40,897,344 C133R probably damaging Het
Recql5 A T 11: 115,897,181 N437K probably benign Het
Samd10 A G 2: 181,597,214 Y135H probably damaging Het
Scnn1b G T 7: 121,914,332 probably null Het
Serpina7 C T X: 139,083,137 V58I probably benign Het
Slf1 A T 13: 77,125,475 probably benign Het
Tedc1 C T 12: 113,163,188 R357* probably null Het
Urb1 C T 16: 90,792,814 A360T probably damaging Het
Ush2a G T 1: 188,862,825 R3818L probably benign Het
Vmn2r57 C T 7: 41,427,584 R386K probably benign Het
Wnt3a T C 11: 59,256,309 N184D probably benign Het
Xpc G A 6: 91,493,005 R746W probably damaging Het
Other mutations in Mgrn1
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL02175:Mgrn1 APN 16 4920368 missense probably benign 0.02
IGL02382:Mgrn1 APN 16 4922618 missense probably damaging 0.97
R1204:Mgrn1 UTSW 16 4907409 missense probably damaging 1.00
R1515:Mgrn1 UTSW 16 4915780 missense probably benign 0.11
R1625:Mgrn1 UTSW 16 4910763 missense probably damaging 1.00
R2875:Mgrn1 UTSW 16 4907416 missense possibly damaging 0.85
R4928:Mgrn1 UTSW 16 4927862 missense probably benign 0.29
R4955:Mgrn1 UTSW 16 4934219 missense probably benign 0.00
R6085:Mgrn1 UTSW 16 4920376 missense probably benign 0.01
R6189:Mgrn1 UTSW 16 4910810 critical splice donor site probably null
R7095:Mgrn1 UTSW 16 4927664 splice site probably null
R7293:Mgrn1 UTSW 16 4932220 missense probably benign 0.01
R7610:Mgrn1 UTSW 16 4934233 makesense probably null
R8187:Mgrn1 UTSW 16 4920365 missense probably benign 0.02
R8376:Mgrn1 UTSW 16 4915766 missense probably damaging 1.00
Z1177:Mgrn1 UTSW 16 4922724 missense probably benign 0.17
Posted On2013-06-21