Mutagenetix > Incidental Mutation

Incidental Mutation 'R6720:Olfr890'

529543

Institutional Source

Beutler Lab

Gene Symbol

Olfr890

Ensembl Gene

ENSMUSG00000096409

Gene Name

olfactory receptor 890

Synonyms

MOR162-3, MOR162-15_p, GA_x6K02T2PVTD-31822365-31823309

MMRRC Submission

044838-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.058) question?

Stock #

R6720 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

38142517-38148375 bp(+) (GRCm38)

Type of Mutation

start codon destroyed

DNA Base Change (assembly)

T to A at 38143153 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Methionine to Lysine at position 1 (M1K)

Ref Sequence

ENSEMBL: ENSMUSP00000149829 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000079804] [ENSMUST00000213458]

AlphaFold

Q7TRD9

Predicted Effect

probably damaging
Transcript: ENSMUST00000079804
AA Change: M6K

PolyPhen 2 Score 0.991 (Sensitivity: 0.71; Specificity: 0.97)

SMART Domains

Protein: ENSMUSP00000078733
Gene: ENSMUSG00000096409
AA Change: M6K

Domain	Start	End	E-Value	Type
Pfam:7tm_4	36	311	2.3e-48	PFAM
Pfam:7tm_1	46	293	9.6e-25	PFAM

Predicted Effect

probably null
Transcript: ENSMUST00000213458
AA Change: M1K

PolyPhen 2 Score 0.995 (Sensitivity: 0.68; Specificity: 0.97)

Meta Mutation Damage Score

0.9539

Coding Region Coverage

1x: 99.9%
3x: 99.5%
10x: 97.7%
20x: 93.6%

Validation Efficiency

98% (50/51)

MGI Phenotype

FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

Allele List at MGI

Other mutations in this stock

Total: 50 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
1700013G24Rik	G	A	4: 137,454,686 (GRCm38)	E51K	possibly damaging	Het
Abca1	A	C	4: 53,083,733 (GRCm38)	L700R	probably damaging	Het
Arpc1a	C	A	5: 145,101,222 (GRCm38)		probably null	Het
Baz2b	G	T	2: 59,924,890 (GRCm38)	P241Q	probably damaging	Het
Cd6	T	A	19: 10,794,609 (GRCm38)	T414S	probably benign	Het
Ces2b	A	T	8: 104,836,869 (GRCm38)	E409D	probably benign	Het
Cfap54	A	G	10: 92,821,119 (GRCm38)	Y3024H	probably benign	Het
Chrm1	A	G	19: 8,678,548 (GRCm38)	T206A	probably benign	Het
Clptm1l	T	C	13: 73,618,516 (GRCm38)	W512R	probably damaging	Het
Col15a1	T	A	4: 47,247,552 (GRCm38)		probably null	Het
Cox15	A	G	19: 43,736,789 (GRCm38)	S392P	probably damaging	Het
Cr2	T	C	1: 195,155,200 (GRCm38)	M1197V	probably damaging	Het
Ddx60	A	G	8: 62,000,689 (GRCm38)	K1281E	probably benign	Het
Dnah11	A	G	12: 118,045,646 (GRCm38)	F2094L	probably damaging	Het
Ear2	T	A	14: 44,102,959 (GRCm38)	C25S	probably damaging	Het
Ect2l	T	C	10: 18,140,264 (GRCm38)	D802G	probably damaging	Het
Eftud2	G	A	11: 102,838,623 (GRCm38)	Q84*	probably null	Het
Eif4g3	T	A	4: 138,175,832 (GRCm38)		probably null	Het
Ephb2	T	C	4: 136,657,502 (GRCm38)	D866G	probably damaging	Het
Fam129b	T	A	2: 32,905,826 (GRCm38)	V22D	probably damaging	Het
Farsb	A	G	1: 78,472,497 (GRCm38)	M99T	probably damaging	Het
Foxs1	T	A	2: 152,932,720 (GRCm38)	S138C	probably damaging	Het
Frem1	T	G	4: 83,013,832 (GRCm38)	S211R	probably damaging	Het
Gm19410	G	A	8: 35,807,576 (GRCm38)	R1517Q	probably benign	Het
Gria2	T	C	3: 80,802,304 (GRCm38)	I27M	probably benign	Het
H2-Q7	A	G	17: 35,442,678 (GRCm38)	E299G	probably benign	Het
Hao2	T	G	3: 98,877,135 (GRCm38)	I305L	probably benign	Het
Hectd4	C	T	5: 121,307,381 (GRCm38)	Q122*	probably null	Het
Hivep1	T	A	13: 42,164,284 (GRCm38)	C2079S	probably damaging	Het
Hoxb1	C	A	11: 96,366,987 (GRCm38)	Q248K	probably damaging	Het
Hspb6	A	G	7: 30,554,347 (GRCm38)	D95G	probably benign	Het
Ighv5-2	T	A	12: 113,578,506 (GRCm38)	R117S	probably damaging	Het
Ino80d	A	C	1: 63,058,610 (GRCm38)	S708R	probably damaging	Het
Lman1l	A	G	9: 57,614,072 (GRCm38)		probably null	Het
Mmp15	A	G	8: 95,365,314 (GRCm38)	N51D	probably benign	Het
Naip1	T	C	13: 100,423,077 (GRCm38)	M1140V	probably benign	Het
Olfr1053	A	G	2: 86,315,065 (GRCm38)	S74P	probably damaging	Het
Olfr1373	A	G	11: 52,144,693 (GRCm38)	V279A	probably benign	Het
Olfr397	A	G	11: 73,965,465 (GRCm38)	N286D	probably damaging	Het
Pard3b	A	T	1: 62,159,470 (GRCm38)	N239I	probably damaging	Het
Parvb	C	T	15: 84,297,979 (GRCm38)	R237W	probably damaging	Het
Pcdha9	T	C	18: 36,998,069 (GRCm38)	S64P	probably damaging	Het
Pdcd1	T	C	1: 94,041,389 (GRCm38)	N68S	probably benign	Het
Pi4ka	G	T	16: 17,326,052 (GRCm38)		probably null	Het
Plekha4	A	T	7: 45,540,886 (GRCm38)	D359V	possibly damaging	Het
Serpinb13	A	G	1: 106,994,062 (GRCm38)	I78V	probably benign	Het
Slc39a7	T	A	17: 34,030,108 (GRCm38)	T269S	probably benign	Het
Sltm	T	G	9: 70,573,710 (GRCm38)	D281E	probably damaging	Het
Zfp708	T	C	13: 67,071,432 (GRCm38)	Y76C	probably damaging	Het
Zfp990	T	A	4: 145,536,927 (GRCm38)	V165D	possibly damaging	Het

Other mutations in Olfr890

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01505:Olfr890	APN	9	38,143,871 (GRCm38)	nonsense	probably null
IGL01861:Olfr890	APN	9	38,143,750 (GRCm38)	missense	probably damaging	1.00
IGL02174:Olfr890	APN	9	38,143,785 (GRCm38)	missense	possibly damaging	0.90
IGL02723:Olfr890	APN	9	38,143,411 (GRCm38)	missense	probably benign	0.02
IGL03085:Olfr890	APN	9	38,143,183 (GRCm38)	missense	probably damaging	0.98
FR4449:Olfr890	UTSW	9	38,143,188 (GRCm38)	missense	probably benign	0.00
FR4737:Olfr890	UTSW	9	38,143,188 (GRCm38)	missense	probably benign	0.00
R0637:Olfr890	UTSW	9	38,143,882 (GRCm38)	missense	probably benign	0.00
R1353:Olfr890	UTSW	9	38,143,728 (GRCm38)	missense	probably benign	0.03
R1813:Olfr890	UTSW	9	38,143,729 (GRCm38)	missense	possibly damaging	0.78
R5997:Olfr890	UTSW	9	38,143,801 (GRCm38)	missense	probably damaging	1.00
R6004:Olfr890	UTSW	9	38,143,960 (GRCm38)	missense	probably damaging	1.00
R6417:Olfr890	UTSW	9	38,143,315 (GRCm38)	missense	probably damaging	1.00
R6420:Olfr890	UTSW	9	38,143,315 (GRCm38)	missense	probably damaging	1.00
R7223:Olfr890	UTSW	9	38,143,753 (GRCm38)	missense	probably benign	0.02
R7601:Olfr890	UTSW	9	38,143,378 (GRCm38)	missense	probably benign	0.13
R7671:Olfr890	UTSW	9	38,143,440 (GRCm38)	missense	probably benign	0.02
R8034:Olfr890	UTSW	9	38,143,677 (GRCm38)	missense	probably damaging	1.00
R8356:Olfr890	UTSW	9	38,143,685 (GRCm38)	nonsense	probably null
R8456:Olfr890	UTSW	9	38,143,685 (GRCm38)	nonsense	probably null
R8696:Olfr890	UTSW	9	38,143,137 (GRCm38)	start codon destroyed	probably null	0.00
R9487:Olfr890	UTSW	9	38,143,570 (GRCm38)	missense	probably benign	0.22
R9517:Olfr890	UTSW	9	38,143,327 (GRCm38)	missense	probably damaging	1.00
Z1176:Olfr890	UTSW	9	38,143,431 (GRCm38)	missense	probably benign	0.02

Predicted Primers

PCR Primer
(F):5'- ATGGCTGATGTACCTTGTCCC -3'
(R):5'- ACCCACCAGCATTTTGGGTG -3'

Sequencing Primer
(F):5'- CCTTTGAGATTATCACTTGGAAGGC -3'
(R):5'- CCACCAGCATTTTGGGTGTTATGAC -3'

Posted On

2018-08-01