Incidental Mutation 'R6786:Vmn2r17'
ID 532365
Institutional Source Beutler Lab
Gene Symbol Vmn2r17
Ensembl Gene ENSMUSG00000091879
Gene Name vomeronasal 2, receptor 17
Synonyms EG384221
MMRRC Submission 044900-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.112) question?
Stock # R6786 (G1)
Quality Score 225.009
Status Validated
Chromosome 5
Chromosomal Location 109567879-109601253 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to T at 109575695 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Threonine to Serine at position 189 (T189S)
Ref Sequence ENSEMBL: ENSMUSP00000131450 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000171841]
AlphaFold E9PYF5
Predicted Effect probably benign
Transcript: ENSMUST00000171841
AA Change: T189S

PolyPhen 2 Score 0.303 (Sensitivity: 0.90; Specificity: 0.89)
SMART Domains Protein: ENSMUSP00000131450
Gene: ENSMUSG00000091879
AA Change: T189S

DomainStartEndE-ValueType
signal peptide 1 24 N/A INTRINSIC
Pfam:ANF_receptor 76 465 7e-26 PFAM
Pfam:NCD3G 508 562 3.5e-18 PFAM
Pfam:7tm_3 593 830 4.8e-55 PFAM
Meta Mutation Damage Score 0.0898 question?
Coding Region Coverage
  • 1x: 99.9%
  • 3x: 99.7%
  • 10x: 98.5%
  • 20x: 96.1%
Validation Efficiency 96% (66/69)
Allele List at MGI
Other mutations in this stock
Total: 68 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Actl7a C A 4: 56,744,116 (GRCm39) Y214* probably null Het
Adnp2 A G 18: 80,172,960 (GRCm39) V483A probably benign Het
Aif1 C T 17: 35,390,472 (GRCm39) V93M probably damaging Het
Alpk2 A G 18: 65,439,705 (GRCm39) S563P probably benign Het
Ank2 A T 3: 126,752,581 (GRCm39) N378K probably damaging Het
Ano4 C T 10: 88,828,732 (GRCm39) probably null Het
Asxl3 G A 18: 22,658,497 (GRCm39) C2169Y probably damaging Het
Atp2b1 T C 10: 98,852,821 (GRCm39) C101R probably damaging Het
Bcs1l C T 1: 74,629,844 (GRCm39) R224C probably damaging Het
Car2 T C 3: 14,951,710 (GRCm39) probably benign Het
Cbln1 T C 8: 88,198,657 (GRCm39) N71S probably benign Het
Cdh8 T A 8: 99,950,579 (GRCm39) T224S probably benign Het
Cdin1 A G 2: 115,462,462 (GRCm39) I65V probably benign Het
Cep131 G A 11: 119,956,218 (GRCm39) R1014W probably damaging Het
Cfap61 T C 2: 145,887,363 (GRCm39) S603P possibly damaging Het
Chd8 G T 14: 52,464,125 (GRCm39) L659I probably benign Het
Ckap5 G A 2: 91,387,920 (GRCm39) G255D probably benign Het
Clec18a C A 8: 111,807,572 (GRCm39) W126L probably benign Het
Cux1 T A 5: 136,596,085 (GRCm39) N4Y probably damaging Het
Dgcr8 A T 16: 18,101,693 (GRCm39) Y196* probably null Het
Dnah14 A T 1: 181,468,970 (GRCm39) I1267F probably benign Het
Dock7 T C 4: 98,949,529 (GRCm39) N438D probably benign Het
Dock8 A T 19: 25,160,386 (GRCm39) H1763L possibly damaging Het
Elp1 T C 4: 56,771,555 (GRCm39) D914G possibly damaging Het
Fpr-rs6 A T 17: 20,403,100 (GRCm39) M87K possibly damaging Het
Gabrg1 A G 5: 70,911,610 (GRCm39) S339P probably benign Het
Gm10801 AAGT AAGTAGT 2: 98,494,148 (GRCm39) probably null Het
Gm12695 A G 4: 96,651,058 (GRCm39) S132P probably damaging Het
Gm3443 T A 19: 21,533,128 (GRCm39) C31S probably damaging Het
Gzmf A T 14: 56,444,452 (GRCm39) F40L probably benign Het
Herc1 TCCC TCC 9: 66,408,470 (GRCm39) probably null Het
Lrguk A G 6: 34,072,522 (GRCm39) E604G probably benign Het
Marveld3 C A 8: 110,674,732 (GRCm39) K361N probably benign Het
Mgat4b A T 11: 50,121,525 (GRCm39) Y47F probably damaging Het
Mmel1 G T 4: 154,976,885 (GRCm39) E520* probably null Het
Msantd5f6 A T 4: 73,321,843 (GRCm39) M64K possibly damaging Het
Muc21 T C 17: 35,934,057 (GRCm39) probably benign Het
Myod1 A G 7: 46,027,741 (GRCm39) T294A probably benign Het
Nfix A T 8: 85,454,276 (GRCm39) S219T probably damaging Het
Nr4a2 A G 2: 57,001,920 (GRCm39) F115L probably benign Het
Numa1 A C 7: 101,641,845 (GRCm39) M98L probably benign Het
Or5b105 T C 19: 13,080,567 (GRCm39) I28V probably benign Het
P3h1 C T 4: 119,095,151 (GRCm39) L303F possibly damaging Het
Pias4 G A 10: 80,993,080 (GRCm39) T5I probably damaging Het
Pik3ip1 A G 11: 3,282,124 (GRCm39) N68S probably benign Het
Pkdrej T C 15: 85,702,850 (GRCm39) T1029A probably benign Het
Recql A T 6: 142,310,278 (GRCm39) D517E probably benign Het
Sall2 G T 14: 52,552,078 (GRCm39) H372Q probably damaging Het
Scn8a A C 15: 100,930,096 (GRCm39) I1436L probably benign Het
Slc4a5 T C 6: 83,273,729 (GRCm39) probably null Het
Stox2 A C 8: 47,639,500 (GRCm39) F898C probably damaging Het
Sumo2 A T 11: 115,414,601 (GRCm39) probably null Het
Sycp2 C T 2: 178,025,345 (GRCm39) E366K possibly damaging Het
Tanc1 A G 2: 59,622,150 (GRCm39) K423R probably benign Het
Tbx21 T A 11: 97,005,872 (GRCm39) Q31L possibly damaging Het
Tfap2a T A 13: 40,882,230 (GRCm39) N25I probably damaging Het
Tfdp1 C T 8: 13,420,485 (GRCm39) R105W probably damaging Het
Trav18 G A 14: 54,069,122 (GRCm39) V55I probably benign Het
Trgc1 A T 13: 19,400,646 (GRCm39) D125V unknown Het
Trim55 A G 3: 19,726,938 (GRCm39) D335G probably benign Het
Trim71 T A 9: 114,341,772 (GRCm39) T837S probably benign Het
Vmn1r56 T C 7: 5,198,961 (GRCm39) T219A probably benign Het
Xaf1 A G 11: 72,197,461 (GRCm39) T146A probably benign Het
Zdbf2 T C 1: 63,343,679 (GRCm39) V686A possibly damaging Het
Zfp65 T C 13: 67,856,130 (GRCm39) H383R probably damaging Het
Zfp932 A G 5: 110,157,606 (GRCm39) T435A probably damaging Het
Zfp947 C T 17: 22,364,750 (GRCm39) G308D probably benign Het
Zswim3 T A 2: 164,662,771 (GRCm39) V417E probably damaging Het
Other mutations in Vmn2r17
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00325:Vmn2r17 APN 5 109,575,858 (GRCm39) missense probably benign 0.15
IGL01457:Vmn2r17 APN 5 109,600,898 (GRCm39) missense probably benign 0.00
IGL01527:Vmn2r17 APN 5 109,601,006 (GRCm39) missense probably damaging 1.00
IGL01693:Vmn2r17 APN 5 109,600,384 (GRCm39) missense probably damaging 1.00
IGL01738:Vmn2r17 APN 5 109,577,364 (GRCm39) missense probably damaging 1.00
IGL01767:Vmn2r17 APN 5 109,567,903 (GRCm39) missense probably benign 0.01
IGL01932:Vmn2r17 APN 5 109,574,916 (GRCm39) missense probably benign 0.00
IGL01970:Vmn2r17 APN 5 109,575,813 (GRCm39) missense probably damaging 0.97
IGL02009:Vmn2r17 APN 5 109,600,714 (GRCm39) missense possibly damaging 0.67
IGL02365:Vmn2r17 APN 5 109,601,175 (GRCm39) missense probably damaging 1.00
IGL02385:Vmn2r17 APN 5 109,582,247 (GRCm39) missense probably damaging 1.00
IGL02457:Vmn2r17 APN 5 109,601,012 (GRCm39) missense probably damaging 1.00
IGL02646:Vmn2r17 APN 5 109,600,946 (GRCm39) missense probably damaging 1.00
IGL02741:Vmn2r17 APN 5 109,568,077 (GRCm39) missense probably benign
IGL03213:Vmn2r17 APN 5 109,582,256 (GRCm39) critical splice donor site probably null
IGL03216:Vmn2r17 APN 5 109,600,756 (GRCm39) missense probably damaging 1.00
IGL03342:Vmn2r17 APN 5 109,575,782 (GRCm39) missense probably damaging 1.00
IGL03408:Vmn2r17 APN 5 109,577,238 (GRCm39) splice site probably benign
R0349:Vmn2r17 UTSW 5 109,576,202 (GRCm39) missense probably damaging 1.00
R0418:Vmn2r17 UTSW 5 109,600,747 (GRCm39) missense probably damaging 1.00
R0800:Vmn2r17 UTSW 5 109,575,192 (GRCm39) splice site probably benign
R0836:Vmn2r17 UTSW 5 109,575,822 (GRCm39) missense possibly damaging 0.89
R1715:Vmn2r17 UTSW 5 109,576,110 (GRCm39) missense probably benign 0.00
R1738:Vmn2r17 UTSW 5 109,576,377 (GRCm39) missense probably benign 0.10
R1801:Vmn2r17 UTSW 5 109,576,344 (GRCm39) missense probably damaging 1.00
R2054:Vmn2r17 UTSW 5 109,600,352 (GRCm39) missense probably damaging 0.98
R2060:Vmn2r17 UTSW 5 109,575,075 (GRCm39) missense probably benign 0.00
R2192:Vmn2r17 UTSW 5 109,582,144 (GRCm39) missense possibly damaging 0.81
R2315:Vmn2r17 UTSW 5 109,575,897 (GRCm39) missense probably damaging 1.00
R2374:Vmn2r17 UTSW 5 109,575,104 (GRCm39) missense probably benign
R3612:Vmn2r17 UTSW 5 109,577,463 (GRCm39) missense probably benign 0.00
R3832:Vmn2r17 UTSW 5 109,576,262 (GRCm39) missense probably damaging 1.00
R4273:Vmn2r17 UTSW 5 109,600,832 (GRCm39) missense probably benign 0.44
R4494:Vmn2r17 UTSW 5 109,576,335 (GRCm39) missense probably damaging 1.00
R4597:Vmn2r17 UTSW 5 109,577,428 (GRCm39) missense probably benign 0.01
R4675:Vmn2r17 UTSW 5 109,575,049 (GRCm39) missense probably benign 0.00
R4701:Vmn2r17 UTSW 5 109,575,849 (GRCm39) missense probably damaging 0.99
R4754:Vmn2r17 UTSW 5 109,600,715 (GRCm39) missense probably damaging 0.99
R4841:Vmn2r17 UTSW 5 109,582,246 (GRCm39) missense probably damaging 1.00
R4842:Vmn2r17 UTSW 5 109,582,246 (GRCm39) missense probably damaging 1.00
R4865:Vmn2r17 UTSW 5 109,574,985 (GRCm39) missense probably damaging 1.00
R4902:Vmn2r17 UTSW 5 109,601,220 (GRCm39) missense probably benign 0.14
R4989:Vmn2r17 UTSW 5 109,575,739 (GRCm39) missense probably benign 0.07
R5101:Vmn2r17 UTSW 5 109,576,217 (GRCm39) missense probably damaging 0.99
R5109:Vmn2r17 UTSW 5 109,577,342 (GRCm39) missense probably benign 0.06
R5123:Vmn2r17 UTSW 5 109,575,774 (GRCm39) missense possibly damaging 0.90
R5474:Vmn2r17 UTSW 5 109,582,150 (GRCm39) missense probably damaging 1.00
R5485:Vmn2r17 UTSW 5 109,567,972 (GRCm39) missense probably benign 0.06
R5611:Vmn2r17 UTSW 5 109,576,030 (GRCm39) missense probably damaging 0.97
R5652:Vmn2r17 UTSW 5 109,577,430 (GRCm39) missense probably benign 0.10
R5717:Vmn2r17 UTSW 5 109,575,140 (GRCm39) missense possibly damaging 0.94
R5735:Vmn2r17 UTSW 5 109,600,716 (GRCm39) missense possibly damaging 0.67
R5766:Vmn2r17 UTSW 5 109,575,139 (GRCm39) missense possibly damaging 0.46
R6645:Vmn2r17 UTSW 5 109,576,247 (GRCm39) missense probably damaging 1.00
R6821:Vmn2r17 UTSW 5 109,577,331 (GRCm39) missense probably damaging 1.00
R6979:Vmn2r17 UTSW 5 109,576,265 (GRCm39) missense possibly damaging 0.46
R6984:Vmn2r17 UTSW 5 109,600,533 (GRCm39) missense probably benign 0.10
R7269:Vmn2r17 UTSW 5 109,576,337 (GRCm39) missense possibly damaging 0.88
R7509:Vmn2r17 UTSW 5 109,575,695 (GRCm39) missense probably benign 0.30
R7736:Vmn2r17 UTSW 5 109,600,757 (GRCm39) missense probably benign 0.05
R7789:Vmn2r17 UTSW 5 109,600,831 (GRCm39) missense possibly damaging 0.77
R7814:Vmn2r17 UTSW 5 109,575,739 (GRCm39) missense probably benign 0.07
R7847:Vmn2r17 UTSW 5 109,568,063 (GRCm39) missense probably damaging 1.00
R7863:Vmn2r17 UTSW 5 109,568,035 (GRCm39) missense probably benign
R7893:Vmn2r17 UTSW 5 109,575,944 (GRCm39) missense probably benign 0.05
R8234:Vmn2r17 UTSW 5 109,601,235 (GRCm39) missense probably benign 0.01
R8382:Vmn2r17 UTSW 5 109,576,387 (GRCm39) missense probably benign 0.01
R8435:Vmn2r17 UTSW 5 109,576,172 (GRCm39) missense probably benign 0.01
R8465:Vmn2r17 UTSW 5 109,600,691 (GRCm39) missense probably damaging 0.99
R8555:Vmn2r17 UTSW 5 109,600,810 (GRCm39) missense probably damaging 0.99
R8900:Vmn2r17 UTSW 5 109,575,863 (GRCm39) missense probably benign 0.25
R9293:Vmn2r17 UTSW 5 109,600,712 (GRCm39) missense probably damaging 1.00
R9308:Vmn2r17 UTSW 5 109,600,505 (GRCm39) missense probably damaging 0.98
R9378:Vmn2r17 UTSW 5 109,575,732 (GRCm39) missense possibly damaging 0.94
R9597:Vmn2r17 UTSW 5 109,575,669 (GRCm39) missense probably damaging 1.00
Predicted Primers PCR Primer
(F):5'- TGGGACTTGTCAGGAATAGCC -3'
(R):5'- CTGCATGTTTTCTGGGATCATATTCAC -3'

Sequencing Primer
(F):5'- AGCCTAGAATCTAATAGGGACAATTC -3'
(R):5'- TTCTGGGATCATATTCACAAAAGC -3'
Posted On 2018-08-29