Incidental Mutation 'R6842:Or13f5'
ID 533893
Institutional Source Beutler Lab
Gene Symbol Or13f5
Ensembl Gene ENSMUSG00000089717
Gene Name olfactory receptor family 13 subfamily F member 5
Synonyms GA_x6K02T2N78B-7168533-7167574, Olfr275, MOR262-2
MMRRC Submission 044948-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.085) question?
Stock # R6842 (G1)
Quality Score 225.009
Status Not validated
Chromosome 4
Chromosomal Location 52825399-52826358 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to C at 52825576 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Tyrosine to Histidine at position 60 (Y60H)
Ref Sequence ENSEMBL: ENSMUSP00000092700 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000095085]
AlphaFold Q7TS18
Predicted Effect probably damaging
Transcript: ENSMUST00000095085
AA Change: Y60H

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
SMART Domains Protein: ENSMUSP00000092700
Gene: ENSMUSG00000089717
AA Change: Y60H

DomainStartEndE-ValueType
Pfam:7tm_4 30 308 9.8e-54 PFAM
Pfam:7tm_1 41 290 6.2e-20 PFAM
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 99.9%
  • 10x: 99.5%
  • 20x: 98.2%
Validation Efficiency
MGI Phenotype FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
Allele List at MGI
Other mutations in this stock
Total: 41 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Acsbg3 A G 17: 57,184,432 (GRCm39) N69S probably benign Het
Adgrl3 C T 5: 81,888,927 (GRCm39) A1042V probably damaging Het
Armh3 A G 19: 45,807,416 (GRCm39) V660A probably benign Het
C1s2 T A 6: 124,604,461 (GRCm39) H395L probably benign Het
Cacna1e A G 1: 154,358,863 (GRCm39) I307T probably damaging Het
Cap2 T C 13: 46,800,101 (GRCm39) S381P probably damaging Het
Cbfa2t2 A G 2: 154,365,965 (GRCm39) T392A probably benign Het
Ccdc127 T C 13: 74,505,088 (GRCm39) I212T probably damaging Het
Cela3a A G 4: 137,132,979 (GRCm39) V91A probably benign Het
Cep85 C G 4: 133,883,167 (GRCm39) A241P probably benign Het
Csmd2 T C 4: 128,402,952 (GRCm39) F2347L possibly damaging Het
Ddx19a A G 8: 111,705,257 (GRCm39) V288A possibly damaging Het
Fbxl5 T C 5: 43,930,928 (GRCm39) E53G probably damaging Het
Fbxw26 A T 9: 109,553,988 (GRCm39) I217N probably damaging Het
Fgfr1op2 T A 6: 146,491,536 (GRCm39) probably null Het
Ighv1-37 A T 12: 114,860,275 (GRCm39) I6N probably damaging Het
Klhdc10 T C 6: 30,439,781 (GRCm39) L128P probably damaging Het
Lypla1 C T 1: 4,902,563 (GRCm39) S24F probably benign Het
Mme T A 3: 63,269,465 (GRCm39) D591E probably damaging Het
Mmp1b T A 9: 7,384,888 (GRCm39) I254F probably damaging Het
Msr1 T C 8: 40,085,866 (GRCm39) M5V probably benign Het
Myh8 A G 11: 67,175,481 (GRCm39) D312G probably damaging Het
Nav2 T C 7: 49,107,917 (GRCm39) Y709H possibly damaging Het
Oas1g T C 5: 121,025,621 (GRCm39) E2G probably benign Het
Ocm T A 5: 143,962,509 (GRCm39) I6F unknown Het
Odad2 C T 18: 7,268,401 (GRCm39) D373N probably benign Het
Or2ag12 T C 7: 106,277,093 (GRCm39) Y200C probably damaging Het
Or8a1b T C 9: 37,622,885 (GRCm39) N230S probably benign Het
Or8b12i A G 9: 20,082,549 (GRCm39) L106P possibly damaging Het
Pax1 A G 2: 147,215,640 (GRCm39) D419G probably benign Het
Plbd1 T A 6: 136,612,612 (GRCm39) I194F probably benign Het
Prdx6 A T 1: 161,074,940 (GRCm39) C47S probably damaging Het
Sec24d T C 3: 123,136,868 (GRCm39) S534P probably benign Het
Sgk3 T C 1: 9,968,979 (GRCm39) V452A probably benign Het
Sipa1l1 T C 12: 82,467,320 (GRCm39) V1177A probably benign Het
Tgfbr1 T C 4: 47,383,757 (GRCm39) C32R probably damaging Het
Trim66 T C 7: 109,059,983 (GRCm39) N801S probably benign Het
Utp6 C T 11: 79,831,775 (GRCm39) S504N probably benign Het
Wdsub1 A C 2: 59,708,532 (GRCm39) S114A probably benign Het
Wfikkn2 T C 11: 94,128,866 (GRCm39) E425G probably damaging Het
Zfp956 C T 6: 47,940,763 (GRCm39) T374I possibly damaging Het
Other mutations in Or13f5
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01108:Or13f5 APN 4 52,825,727 (GRCm39) missense probably damaging 1.00
IGL01758:Or13f5 APN 4 52,825,468 (GRCm39) nonsense probably null
IGL01925:Or13f5 APN 4 52,825,910 (GRCm39) missense probably benign 0.00
IGL02525:Or13f5 APN 4 52,825,616 (GRCm39) missense probably damaging 1.00
IGL02536:Or13f5 APN 4 52,825,817 (GRCm39) missense possibly damaging 0.95
IGL02829:Or13f5 APN 4 52,826,027 (GRCm39) missense probably damaging 0.98
R0068:Or13f5 UTSW 4 52,825,503 (GRCm39) nonsense probably null
R0068:Or13f5 UTSW 4 52,825,503 (GRCm39) nonsense probably null
R0190:Or13f5 UTSW 4 52,825,613 (GRCm39) missense probably damaging 0.97
R4376:Or13f5 UTSW 4 52,826,195 (GRCm39) missense possibly damaging 0.81
R4617:Or13f5 UTSW 4 52,825,399 (GRCm39) start codon destroyed probably benign 0.35
R4658:Or13f5 UTSW 4 52,826,240 (GRCm39) missense probably damaging 0.99
R4828:Or13f5 UTSW 4 52,826,138 (GRCm39) missense probably damaging 1.00
R4850:Or13f5 UTSW 4 52,825,450 (GRCm39) missense possibly damaging 0.94
R6194:Or13f5 UTSW 4 52,825,779 (GRCm39) nonsense probably null
R6401:Or13f5 UTSW 4 52,826,242 (GRCm39) missense probably damaging 1.00
R7033:Or13f5 UTSW 4 52,826,089 (GRCm39) missense probably benign
R7998:Or13f5 UTSW 4 52,825,970 (GRCm39) missense possibly damaging 0.89
R8101:Or13f5 UTSW 4 52,825,849 (GRCm39) missense probably benign 0.03
R9655:Or13f5 UTSW 4 52,825,526 (GRCm39) missense probably benign
Predicted Primers PCR Primer
(F):5'- GGTTCAGGGAAATTGGACCTC -3'
(R):5'- AATGGGATATCTCAGTGGGTTAC -3'

Sequencing Primer
(F):5'- TCAGGGAAATTGGACCTCTGTCAC -3'
(R):5'- GATGGCCACATACCTGTCATAGG -3'
Posted On 2018-09-12