Incidental Mutation 'IGL01011:Abca12'
ID 53391
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Abca12
Ensembl Gene ENSMUSG00000050296
Gene Name ATP-binding cassette, sub-family A (ABC1), member 12
Synonyms 4833417A11Rik, 4832428G11Rik
Accession Numbers
Essential gene? Essential (E-score: 1.000) question?
Stock # IGL01011
Quality Score
Status
Chromosome 1
Chromosomal Location 71242276-71414910 bp(-) (GRCm38)
Type of Mutation missense
DNA Base Change (assembly) T to C at 71263632 bp (GRCm38)
Zygosity Heterozygous
Amino Acid Change Isoleucine to Valine at position 2143 (I2143V)
Ref Sequence ENSEMBL: ENSMUSP00000084523 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000087268]
AlphaFold E9Q876
Predicted Effect probably benign
Transcript: ENSMUST00000087268
AA Change: I2143V

PolyPhen 2 Score 0.024 (Sensitivity: 0.95; Specificity: 0.81)
SMART Domains Protein: ENSMUSP00000084523
Gene: ENSMUSG00000050296
AA Change: I2143V

DomainStartEndE-ValueType
transmembrane domain 24 43 N/A INTRINSIC
low complexity region 246 259 N/A INTRINSIC
Pfam:ABC2_membrane_3 885 1267 2.9e-24 PFAM
AAA 1370 1554 4.2e-10 SMART
low complexity region 1717 1735 N/A INTRINSIC
Pfam:ABC2_membrane_3 1744 2206 9.6e-35 PFAM
AAA 2282 2467 4.61e-7 SMART
Coding Region Coverage
Validation Efficiency
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The membrane-associated protein encoded by this gene is a member of the superfamily of ATP-binding cassette (ABC) transporters. ABC proteins transport various molecules across extra- and intracellular membranes. ABC genes are divided into seven distinct subfamilies (ABC1, MDR/TAP, MRP, ALD, OABP, GCN20, and White). This encoded protein is a member of the ABC1 subfamily, which is the only major ABC subfamily found exclusively in multicellular eukaryotes. Alternative splicing of this gene results in multiple transcript variants. [provided by RefSeq, Jul 2008]
PHENOTYPE: Mice homozygous for a null allele exhibit neonatal lethality associated with defective skin development and abnormal lung morphology. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 58 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
1700017B05Rik A T 9: 57,258,246 (GRCm38) C282S probably damaging Het
Adgrg6 A C 10: 14,409,798 (GRCm38) I1148S probably damaging Het
Aox4 C T 1: 58,240,775 (GRCm38) R517* probably null Het
Arnt2 T A 7: 84,285,829 (GRCm38) D289V probably benign Het
Atad2b A G 12: 4,965,984 (GRCm38) N570S probably benign Het
Aven G A 2: 112,629,785 (GRCm38) D208N possibly damaging Het
Bcl9l A G 9: 44,505,179 (GRCm38) D183G possibly damaging Het
Cd300lf A G 11: 115,124,333 (GRCm38) S144P probably benign Het
Chd8 C A 14: 52,231,532 (GRCm38) G543V possibly damaging Het
Chrm2 A G 6: 36,524,438 (GRCm38) N410S probably benign Het
Clip4 A G 17: 71,849,939 (GRCm38) I590V probably benign Het
Cnbp C T 6: 87,845,700 (GRCm38) R27H probably benign Het
Col4a3 T C 1: 82,682,301 (GRCm38) V889A unknown Het
Cxcl5 T C 5: 90,760,523 (GRCm38) probably benign Het
Dennd6a G T 14: 26,603,054 (GRCm38) V171F probably damaging Het
Dhx38 T C 8: 109,562,691 (GRCm38) I26V probably benign Het
Dscaml1 A G 9: 45,683,672 (GRCm38) D691G possibly damaging Het
Etfdh A T 3: 79,612,061 (GRCm38) probably benign Het
Fbn2 G A 18: 58,095,240 (GRCm38) probably benign Het
Foxp2 T A 6: 15,438,019 (GRCm38) *715R probably null Het
Ftl1 A T 7: 45,458,646 (GRCm38) D65E probably benign Het
Galm A G 17: 80,183,280 (GRCm38) T289A probably benign Het
Gm20721 A G 2: 174,345,738 (GRCm38) D1049G probably damaging Het
Gm28778 T C 1: 53,299,118 (GRCm38) V47A probably benign Het
Gm5414 T C 15: 101,628,134 (GRCm38) S19G probably benign Het
H1f6 C T 13: 23,696,049 (GRCm38) L62F probably damaging Het
Hdac7 T A 15: 97,793,935 (GRCm38) E835D possibly damaging Het
Hspg2 C T 4: 137,559,335 (GRCm38) T3663I probably damaging Het
Kdm4d A T 9: 14,464,219 (GRCm38) D114E probably benign Het
Kif5a A T 10: 127,239,196 (GRCm38) V516E probably benign Het
Lrrtm1 A G 6: 77,244,235 (GRCm38) probably null Het
Miga1 G T 3: 152,276,690 (GRCm38) T519K probably benign Het
Mtfr1l G A 4: 134,529,200 (GRCm38) P182S probably damaging Het
Myo15a A G 11: 60,476,992 (GRCm38) I193V probably benign Het
Myo1e T C 9: 70,316,589 (GRCm38) probably benign Het
Or13a26 A T 7: 140,704,437 (GRCm38) Y62F probably damaging Het
Or1e1c A T 11: 73,375,007 (GRCm38) Q86L probably benign Het
Or5h22 T A 16: 59,074,430 (GRCm38) T217S probably benign Het
Pias1 T C 9: 62,912,855 (GRCm38) T277A probably benign Het
Skic3 G A 13: 76,122,665 (GRCm38) C127Y probably damaging Het
Slamf6 T A 1: 171,938,099 (GRCm38) H263Q probably benign Het
Snrnp48 A G 13: 38,220,764 (GRCm38) D202G probably damaging Het
Snx13 T A 12: 35,098,280 (GRCm38) D269E probably damaging Het
Tiam2 A T 17: 3,415,028 (GRCm38) D344V probably benign Het
Tmem62 G T 2: 120,979,219 (GRCm38) K127N possibly damaging Het
Trav15-1-dv6-1 C T 14: 53,560,035 (GRCm38) T46I possibly damaging Het
Trav16d-dv11 C T 14: 53,047,584 (GRCm38) T39M possibly damaging Het
Trio T C 15: 27,736,489 (GRCm38) D2794G probably damaging Het
Trpc7 C T 13: 56,804,540 (GRCm38) G551D probably damaging Het
Ttn A G 2: 76,814,290 (GRCm38) V11294A possibly damaging Het
Ubap2 G A 4: 41,195,328 (GRCm38) probably benign Het
Ubap2l G A 3: 90,009,256 (GRCm38) Q915* probably null Het
Ubfd1 A G 7: 122,078,472 (GRCm38) E340G probably benign Het
Vil1 T C 1: 74,434,887 (GRCm38) probably null Het
Vmn1r6 T G 6: 57,002,544 (GRCm38) L42V probably benign Het
Vps13c A G 9: 67,926,955 (GRCm38) T1635A probably damaging Het
Zfhx3 T A 8: 108,793,594 (GRCm38) H449Q probably benign Het
Zfp750 A T 11: 121,513,096 (GRCm38) S318T probably benign Het
Other mutations in Abca12
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00089:Abca12 APN 1 71,303,541 (GRCm38) missense possibly damaging 0.64
IGL00556:Abca12 APN 1 71,353,757 (GRCm38) missense probably benign 0.00
IGL00813:Abca12 APN 1 71,353,762 (GRCm38) critical splice acceptor site probably null
IGL00835:Abca12 APN 1 71,302,733 (GRCm38) missense probably damaging 1.00
IGL00921:Abca12 APN 1 71,285,729 (GRCm38) missense probably damaging 1.00
IGL01066:Abca12 APN 1 71,353,730 (GRCm38) missense possibly damaging 0.95
IGL01082:Abca12 APN 1 71,314,114 (GRCm38) missense probably damaging 1.00
IGL01310:Abca12 APN 1 71,284,156 (GRCm38) missense probably benign 0.00
IGL01360:Abca12 APN 1 71,286,489 (GRCm38) missense possibly damaging 0.95
IGL01585:Abca12 APN 1 71,319,886 (GRCm38) missense probably benign 0.00
IGL01608:Abca12 APN 1 71,259,442 (GRCm38) missense probably damaging 1.00
IGL01687:Abca12 APN 1 71,267,610 (GRCm38) splice site probably benign
IGL01700:Abca12 APN 1 71,280,390 (GRCm38) missense probably benign
IGL01723:Abca12 APN 1 71,314,168 (GRCm38) missense probably benign 0.01
IGL01804:Abca12 APN 1 71,276,183 (GRCm38) missense probably benign 0.01
IGL01982:Abca12 APN 1 71,346,698 (GRCm38) missense probably benign 0.34
IGL02136:Abca12 APN 1 71,247,142 (GRCm38) missense probably damaging 1.00
IGL02172:Abca12 APN 1 71,302,658 (GRCm38) missense probably benign 0.09
IGL02222:Abca12 APN 1 71,282,886 (GRCm38) missense probably benign 0.40
IGL02266:Abca12 APN 1 71,268,201 (GRCm38) nonsense probably null
IGL02449:Abca12 APN 1 71,401,749 (GRCm38) splice site probably null
IGL02471:Abca12 APN 1 71,258,198 (GRCm38) missense probably benign 0.00
IGL02496:Abca12 APN 1 71,288,553 (GRCm38) missense possibly damaging 0.55
IGL02552:Abca12 APN 1 71,294,747 (GRCm38) missense probably damaging 0.96
IGL02795:Abca12 APN 1 71,288,748 (GRCm38) missense probably damaging 1.00
IGL03000:Abca12 APN 1 71,321,800 (GRCm38) missense probably benign 0.01
IGL03031:Abca12 APN 1 71,314,024 (GRCm38) missense probably benign 0.00
IGL03131:Abca12 APN 1 71,346,702 (GRCm38) missense probably benign
IGL03260:Abca12 APN 1 71,284,099 (GRCm38) missense probably damaging 1.00
IGL03324:Abca12 APN 1 71,314,008 (GRCm38) missense probably benign
IGL03408:Abca12 APN 1 71,264,795 (GRCm38) missense probably damaging 1.00
R0016:Abca12 UTSW 1 71,294,800 (GRCm38) missense probably benign 0.35
R0016:Abca12 UTSW 1 71,294,800 (GRCm38) missense probably benign 0.35
R0121:Abca12 UTSW 1 71,259,786 (GRCm38) splice site probably null
R0172:Abca12 UTSW 1 71,279,402 (GRCm38) missense probably damaging 0.99
R0196:Abca12 UTSW 1 71,259,813 (GRCm38) missense possibly damaging 0.81
R0400:Abca12 UTSW 1 71,259,776 (GRCm38) splice site probably benign
R0466:Abca12 UTSW 1 71,302,663 (GRCm38) missense probably damaging 1.00
R0616:Abca12 UTSW 1 71,302,671 (GRCm38) missense probably damaging 1.00
R0668:Abca12 UTSW 1 71,263,614 (GRCm38) missense probably damaging 1.00
R0928:Abca12 UTSW 1 71,349,174 (GRCm38) missense probably benign 0.06
R1036:Abca12 UTSW 1 71,263,410 (GRCm38) critical splice donor site probably null
R1086:Abca12 UTSW 1 71,295,061 (GRCm38) splice site probably benign
R1300:Abca12 UTSW 1 71,244,808 (GRCm38) missense probably damaging 1.00
R1337:Abca12 UTSW 1 71,294,819 (GRCm38) missense probably benign 0.03
R1356:Abca12 UTSW 1 71,302,953 (GRCm38) splice site probably benign
R1372:Abca12 UTSW 1 71,294,857 (GRCm38) missense probably damaging 1.00
R1434:Abca12 UTSW 1 71,309,800 (GRCm38) missense probably benign 0.00
R1580:Abca12 UTSW 1 71,265,965 (GRCm38) missense possibly damaging 0.65
R1675:Abca12 UTSW 1 71,263,411 (GRCm38) critical splice donor site probably null
R1773:Abca12 UTSW 1 71,288,596 (GRCm38) missense probably damaging 1.00
R1829:Abca12 UTSW 1 71,295,029 (GRCm38) missense probably benign 0.26
R1922:Abca12 UTSW 1 71,319,924 (GRCm38) missense probably benign 0.10
R1927:Abca12 UTSW 1 71,244,840 (GRCm38) missense probably damaging 1.00
R2115:Abca12 UTSW 1 71,244,771 (GRCm38) missense probably benign 0.01
R2146:Abca12 UTSW 1 71,263,488 (GRCm38) missense probably benign 0.02
R2148:Abca12 UTSW 1 71,263,488 (GRCm38) missense probably benign 0.02
R2149:Abca12 UTSW 1 71,263,488 (GRCm38) missense probably benign 0.02
R2150:Abca12 UTSW 1 71,263,488 (GRCm38) missense probably benign 0.02
R2299:Abca12 UTSW 1 71,258,222 (GRCm38) missense probably damaging 1.00
R2392:Abca12 UTSW 1 71,258,105 (GRCm38) missense probably damaging 1.00
R2571:Abca12 UTSW 1 71,249,885 (GRCm38) missense probably benign 0.00
R3077:Abca12 UTSW 1 71,267,605 (GRCm38) missense probably benign 0.02
R3078:Abca12 UTSW 1 71,267,605 (GRCm38) missense probably benign 0.02
R3705:Abca12 UTSW 1 71,285,705 (GRCm38) missense probably damaging 1.00
R3800:Abca12 UTSW 1 71,265,887 (GRCm38) missense probably damaging 1.00
R3905:Abca12 UTSW 1 71,279,457 (GRCm38) missense probably benign 0.02
R3905:Abca12 UTSW 1 71,268,230 (GRCm38) missense possibly damaging 0.79
R3962:Abca12 UTSW 1 71,274,515 (GRCm38) splice site probably null
R4082:Abca12 UTSW 1 71,267,463 (GRCm38) missense possibly damaging 0.64
R4131:Abca12 UTSW 1 71,319,871 (GRCm38) critical splice donor site probably null
R4214:Abca12 UTSW 1 71,288,697 (GRCm38) missense probably damaging 0.99
R4403:Abca12 UTSW 1 71,267,436 (GRCm38) missense probably damaging 1.00
R4524:Abca12 UTSW 1 71,302,917 (GRCm38) missense probably benign 0.19
R4615:Abca12 UTSW 1 71,330,334 (GRCm38) missense probably benign
R4617:Abca12 UTSW 1 71,330,334 (GRCm38) missense probably benign
R4714:Abca12 UTSW 1 71,321,450 (GRCm38) missense probably benign 0.00
R4809:Abca12 UTSW 1 71,278,856 (GRCm38) missense probably benign 0.10
R4810:Abca12 UTSW 1 71,303,612 (GRCm38) missense probably benign 0.00
R4825:Abca12 UTSW 1 71,302,685 (GRCm38) missense possibly damaging 0.70
R4990:Abca12 UTSW 1 71,294,939 (GRCm38) missense possibly damaging 0.61
R5013:Abca12 UTSW 1 71,264,767 (GRCm38) missense probably damaging 0.99
R5026:Abca12 UTSW 1 71,317,224 (GRCm38) missense probably benign 0.04
R5064:Abca12 UTSW 1 71,300,960 (GRCm38) missense probably damaging 1.00
R5188:Abca12 UTSW 1 71,291,492 (GRCm38) missense probably benign 0.23
R5234:Abca12 UTSW 1 71,263,664 (GRCm38) missense probably damaging 0.99
R5267:Abca12 UTSW 1 71,335,774 (GRCm38) splice site probably benign
R5302:Abca12 UTSW 1 71,283,952 (GRCm38) missense possibly damaging 0.91
R5441:Abca12 UTSW 1 71,295,056 (GRCm38) missense probably damaging 1.00
R5451:Abca12 UTSW 1 71,294,917 (GRCm38) missense possibly damaging 0.94
R5526:Abca12 UTSW 1 71,292,446 (GRCm38) missense probably benign 0.29
R5529:Abca12 UTSW 1 71,264,881 (GRCm38) missense probably damaging 1.00
R5615:Abca12 UTSW 1 71,307,059 (GRCm38) missense probably damaging 1.00
R5649:Abca12 UTSW 1 71,291,342 (GRCm38) missense probably damaging 1.00
R5800:Abca12 UTSW 1 71,321,432 (GRCm38) missense possibly damaging 0.78
R5807:Abca12 UTSW 1 71,303,492 (GRCm38) missense probably damaging 1.00
R5878:Abca12 UTSW 1 71,346,633 (GRCm38) missense possibly damaging 0.79
R5987:Abca12 UTSW 1 71,258,098 (GRCm38) missense probably damaging 1.00
R6280:Abca12 UTSW 1 71,272,460 (GRCm38) missense probably benign 0.04
R6316:Abca12 UTSW 1 71,313,959 (GRCm38) missense probably benign 0.01
R6337:Abca12 UTSW 1 71,295,013 (GRCm38) missense probably damaging 1.00
R6383:Abca12 UTSW 1 71,247,184 (GRCm38) missense probably benign 0.03
R6564:Abca12 UTSW 1 71,309,850 (GRCm38) missense possibly damaging 0.57
R6582:Abca12 UTSW 1 71,258,225 (GRCm38) missense probably benign 0.00
R6756:Abca12 UTSW 1 71,259,353 (GRCm38) splice site probably null
R6876:Abca12 UTSW 1 71,263,508 (GRCm38) missense probably damaging 0.98
R6999:Abca12 UTSW 1 71,317,162 (GRCm38) nonsense probably null
R7145:Abca12 UTSW 1 71,307,053 (GRCm38) missense possibly damaging 0.92
R7272:Abca12 UTSW 1 71,248,432 (GRCm38) missense probably damaging 0.99
R7285:Abca12 UTSW 1 71,349,155 (GRCm38) nonsense probably null
R7421:Abca12 UTSW 1 71,247,136 (GRCm38) nonsense probably null
R7531:Abca12 UTSW 1 71,247,173 (GRCm38) missense probably damaging 0.99
R7592:Abca12 UTSW 1 71,288,677 (GRCm38) missense probably benign 0.01
R7687:Abca12 UTSW 1 71,258,182 (GRCm38) missense probably benign 0.00
R7690:Abca12 UTSW 1 71,314,154 (GRCm38) missense probably benign 0.00
R7709:Abca12 UTSW 1 71,335,728 (GRCm38) missense probably benign 0.00
R7736:Abca12 UTSW 1 71,319,964 (GRCm38) missense probably benign 0.01
R7754:Abca12 UTSW 1 71,302,887 (GRCm38) missense probably benign
R7761:Abca12 UTSW 1 71,330,288 (GRCm38) missense probably damaging 1.00
R7808:Abca12 UTSW 1 71,274,634 (GRCm38) splice site probably null
R7816:Abca12 UTSW 1 71,292,429 (GRCm38) missense probably benign 0.01
R7821:Abca12 UTSW 1 71,259,791 (GRCm38) missense probably benign 0.12
R7827:Abca12 UTSW 1 71,414,678 (GRCm38) start gained probably benign
R7829:Abca12 UTSW 1 71,292,421 (GRCm38) missense probably benign 0.37
R7863:Abca12 UTSW 1 71,293,497 (GRCm38) missense probably damaging 0.96
R8053:Abca12 UTSW 1 71,349,169 (GRCm38) nonsense probably null
R8093:Abca12 UTSW 1 71,280,393 (GRCm38) missense probably benign 0.00
R8120:Abca12 UTSW 1 71,259,381 (GRCm38) missense possibly damaging 0.92
R8136:Abca12 UTSW 1 71,248,397 (GRCm38) missense probably benign 0.15
R8155:Abca12 UTSW 1 71,291,338 (GRCm38) missense probably damaging 1.00
R8189:Abca12 UTSW 1 71,285,726 (GRCm38) missense probably damaging 1.00
R8233:Abca12 UTSW 1 71,351,757 (GRCm38) missense probably benign 0.00
R8249:Abca12 UTSW 1 71,321,812 (GRCm38) missense probably benign 0.00
R8255:Abca12 UTSW 1 71,319,899 (GRCm38) missense probably benign 0.13
R8300:Abca12 UTSW 1 71,313,964 (GRCm38) missense possibly damaging 0.77
R8339:Abca12 UTSW 1 71,285,672 (GRCm38) missense probably damaging 1.00
R8490:Abca12 UTSW 1 71,284,097 (GRCm38) missense probably damaging 1.00
R8494:Abca12 UTSW 1 71,288,662 (GRCm38) missense probably benign 0.02
R8527:Abca12 UTSW 1 71,309,888 (GRCm38) critical splice acceptor site probably null
R8542:Abca12 UTSW 1 71,309,888 (GRCm38) critical splice acceptor site probably null
R8692:Abca12 UTSW 1 71,288,715 (GRCm38) missense probably damaging 0.96
R8723:Abca12 UTSW 1 71,321,738 (GRCm38) missense probably benign 0.04
R8796:Abca12 UTSW 1 71,258,089 (GRCm38) critical splice donor site probably benign
R8911:Abca12 UTSW 1 71,341,531 (GRCm38) missense probably benign 0.07
R8913:Abca12 UTSW 1 71,264,813 (GRCm38) missense probably damaging 1.00
R8957:Abca12 UTSW 1 71,321,625 (GRCm38) missense possibly damaging 0.90
R9000:Abca12 UTSW 1 71,314,036 (GRCm38) missense probably damaging 1.00
R9137:Abca12 UTSW 1 71,259,366 (GRCm38) missense possibly damaging 0.80
R9228:Abca12 UTSW 1 71,293,440 (GRCm38) missense probably damaging 1.00
R9237:Abca12 UTSW 1 71,279,398 (GRCm38) missense probably damaging 0.97
R9299:Abca12 UTSW 1 71,319,883 (GRCm38) missense possibly damaging 0.48
R9419:Abca12 UTSW 1 71,303,490 (GRCm38) missense possibly damaging 0.81
R9492:Abca12 UTSW 1 71,258,221 (GRCm38) missense possibly damaging 0.81
R9538:Abca12 UTSW 1 71,341,513 (GRCm38) missense probably benign 0.04
R9585:Abca12 UTSW 1 71,303,586 (GRCm38) missense probably damaging 1.00
R9658:Abca12 UTSW 1 71,286,475 (GRCm38) missense probably damaging 0.97
R9763:Abca12 UTSW 1 71,263,558 (GRCm38) missense possibly damaging 0.84
X0013:Abca12 UTSW 1 71,248,433 (GRCm38) missense probably damaging 0.99
X0018:Abca12 UTSW 1 71,314,510 (GRCm38) missense probably benign
X0063:Abca12 UTSW 1 71,349,064 (GRCm38) missense probably benign 0.15
X0065:Abca12 UTSW 1 71,341,461 (GRCm38) critical splice donor site probably null
Z1176:Abca12 UTSW 1 71,284,070 (GRCm38) missense probably damaging 1.00
Z1177:Abca12 UTSW 1 71,292,531 (GRCm38) missense probably damaging 0.98
Z1177:Abca12 UTSW 1 71,282,811 (GRCm38) missense probably damaging 0.98
Z1177:Abca12 UTSW 1 71,276,082 (GRCm38) missense possibly damaging 0.94
Posted On 2013-06-28