Incidental Mutation 'R6826:Cdhr17'
ID 534151
Institutional Source Beutler Lab
Gene Symbol Cdhr17
Ensembl Gene ENSMUSG00000109903
Gene Name cadherin related family member 17
Synonyms Gm28710
MMRRC Submission 045019-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.085) question?
Stock # R6826 (G1)
Quality Score 225.009
Status Not validated
Chromosome 5
Chromosomal Location 16996789-17087437 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to G at 17013292 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Isoleucine to Valine at position 219 (I219V)
Ref Sequence ENSEMBL: ENSMUSP00000147354 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000211738]
AlphaFold A0A1B0GR31
Predicted Effect unknown
Transcript: ENSMUST00000211738
AA Change: I219V
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 99.9%
  • 10x: 99.6%
  • 20x: 98.6%
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 54 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abca6 T C 11: 110,107,431 (GRCm39) N728S probably benign Het
Acaca T C 11: 84,086,362 (GRCm39) S63P probably damaging Het
Akr1c12 A G 13: 4,325,733 (GRCm39) V120A probably benign Het
Ap4b1 G A 3: 103,720,224 (GRCm39) probably null Het
Apol7e T A 15: 77,602,491 (GRCm39) V363D probably damaging Het
Bmpr1b A T 3: 141,563,167 (GRCm39) L259Q probably damaging Het
Clca3a2 T C 3: 144,523,815 (GRCm39) T57A possibly damaging Het
Copb1 T C 7: 113,825,954 (GRCm39) T677A probably benign Het
Crhr2 T C 6: 55,094,725 (GRCm39) probably benign Het
Cyp11a1 A G 9: 57,932,370 (GRCm39) T228A probably damaging Het
Dnah1 T C 14: 31,008,247 (GRCm39) I2084V probably benign Het
Dnajc17 T C 2: 119,011,408 (GRCm39) K174R probably damaging Het
Dnm2 T A 9: 21,415,767 (GRCm39) Y646* probably null Het
Dock9 G A 14: 121,860,330 (GRCm39) P866L probably damaging Het
Elmo3 A T 8: 106,033,378 (GRCm39) I115F probably damaging Het
Elmod1 T C 9: 53,826,883 (GRCm39) T268A probably benign Het
F10 T C 8: 13,096,165 (GRCm39) probably null Het
Fmo4 C T 1: 162,631,338 (GRCm39) V210M probably damaging Het
Foxred2 G T 15: 77,831,285 (GRCm39) H509Q probably benign Het
Hyal6 A G 6: 24,734,371 (GRCm39) I101M probably damaging Het
Igkv5-48 T C 6: 69,703,584 (GRCm39) Y107C probably damaging Het
Jag1 A G 2: 136,958,095 (GRCm39) probably null Het
Leng8 T A 7: 4,148,319 (GRCm39) V697E probably damaging Het
Mdga1 T C 17: 30,189,000 (GRCm39) N21S unknown Het
Midn T A 10: 79,989,961 (GRCm39) C126* probably null Het
Mlh3 A T 12: 85,292,598 (GRCm39) V1303E probably benign Het
Myh4 T C 11: 67,137,357 (GRCm39) L526P probably damaging Het
Or10ag55-ps1 G A 2: 87,114,672 (GRCm39) E13K probably benign Het
Or5b3 T A 19: 13,388,452 (GRCm39) V173E probably benign Het
Pde6b C T 5: 108,578,458 (GRCm39) R799* probably null Het
Pde9a A G 17: 31,685,414 (GRCm39) D382G probably benign Het
Pdrg1 A C 2: 152,852,176 (GRCm39) probably null Het
Peg10 C CATCAGGATG 6: 4,756,353 (GRCm39) probably benign Het
Ppp1r3a C A 6: 14,718,980 (GRCm39) E645* probably null Het
Prrc2b A G 2: 32,112,300 (GRCm39) probably null Het
Ptprb T A 10: 116,153,277 (GRCm39) M578K probably benign Het
Rasgrp3 G T 17: 75,810,241 (GRCm39) V314F probably damaging Het
Rps9 C A 7: 3,708,775 (GRCm39) D84E probably benign Het
Sdf2l1 C G 16: 16,950,158 (GRCm39) R6P probably benign Het
Serpina1e A G 12: 103,915,397 (GRCm39) F270L probably benign Het
Slc24a5 G A 2: 124,910,778 (GRCm39) V70I probably benign Het
Slfn14 C A 11: 83,172,644 (GRCm39) probably null Het
Smcr8 G T 11: 60,669,688 (GRCm39) D279Y possibly damaging Het
Snx16 A T 3: 10,503,148 (GRCm39) V33D probably damaging Het
Tesc A G 5: 118,194,483 (GRCm39) T131A probably damaging Het
Tnfaip8l3 G T 9: 53,934,783 (GRCm39) T64K possibly damaging Het
Vmn2r1 T A 3: 64,012,567 (GRCm39) Y809* probably null Het
Vmn2r25 A G 6: 123,800,071 (GRCm39) V757A probably damaging Het
Vmn2r3 A T 3: 64,182,327 (GRCm39) Y457* probably null Het
Wee1 T C 7: 109,723,870 (GRCm39) probably null Het
Wfdc3 C T 2: 164,576,178 (GRCm39) G38R possibly damaging Het
Zfp541 A G 7: 15,812,907 (GRCm39) E520G probably damaging Het
Zfp579 G T 7: 4,997,425 (GRCm39) A162D probably benign Het
Zfp811 A G 17: 33,016,762 (GRCm39) F425S probably damaging Het
Other mutations in Cdhr17
AlleleSourceChrCoordTypePredicted EffectPPH Score
R6134:Cdhr17 UTSW 5 17,029,683 (GRCm39) missense probably damaging 0.99
R6261:Cdhr17 UTSW 5 17,017,183 (GRCm39) splice site noncoding transcript
R6288:Cdhr17 UTSW 5 17,061,283 (GRCm39) missense possibly damaging 0.66
R6980:Cdhr17 UTSW 5 17,031,944 (GRCm39) missense possibly damaging 0.92
R7224:Cdhr17 UTSW 5 17,041,592 (GRCm39) missense possibly damaging 0.92
R7310:Cdhr17 UTSW 5 17,075,246 (GRCm39) missense possibly damaging 0.96
R7411:Cdhr17 UTSW 5 17,029,763 (GRCm39) missense possibly damaging 0.95
R7798:Cdhr17 UTSW 5 17,061,656 (GRCm39) missense possibly damaging 0.85
R7915:Cdhr17 UTSW 5 17,032,012 (GRCm39) missense probably benign 0.00
R8347:Cdhr17 UTSW 5 17,006,572 (GRCm39) missense probably benign 0.00
R8868:Cdhr17 UTSW 5 17,028,152 (GRCm39) missense probably benign 0.09
R9109:Cdhr17 UTSW 5 16,997,909 (GRCm39) missense possibly damaging 0.86
R9153:Cdhr17 UTSW 5 17,040,916 (GRCm39) critical splice acceptor site probably null
R9200:Cdhr17 UTSW 5 17,006,659 (GRCm39) critical splice donor site probably null
R9261:Cdhr17 UTSW 5 17,006,547 (GRCm39) missense possibly damaging 0.96
R9298:Cdhr17 UTSW 5 16,996,855 (GRCm39) nonsense probably null
R9462:Cdhr17 UTSW 5 17,027,213 (GRCm39) missense
Z1177:Cdhr17 UTSW 5 17,061,722 (GRCm39) missense probably damaging 1.00
Z1177:Cdhr17 UTSW 5 17,040,977 (GRCm39) missense possibly damaging 0.92
Predicted Primers PCR Primer
(F):5'- AGCTCAAAGGCCTGTGTCTG -3'
(R):5'- CAGTTCACAATCTGCAAATAGTTCC -3'

Sequencing Primer
(F):5'- GGATCATCCCCATGCAGTC -3'
(R):5'- AGGTGGATCACTTCTAAATTTGC -3'
Posted On 2018-09-12